ID 902967 - BioProject

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Accession: PRJNA902967 ID: 902967

Shot gun sequencing of genomes of Iberian freshwater fish species

We produced a reference database of whole genome sequences of freshwater fish species from Portuguese rivers. More...

Accession	PRJNA902967
Data Type	Genome sequencing and assembly
Scope	Multispecies
Submission	Registration date: 18-Nov-2022 Faculty of Sciences from the University of Lisbon
Relevance	Evolution

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	35
SRA Experiments	36
Other datasets
BioSample	36
Assembly	35

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Total

35
35

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_029874615.1	JAPMOK000000000	SAMN31781915	ENV1425	Achondrostoma oligolepis
GCA_029874405.1	JAPMOI000000000	SAMN31781917	ENV1444	Achondrostoma oligolepis
GCA_029874995.1	JAPMNU000000000	SAMN31781932	AalburnusT0-10	Alburnus alburnus
GCA_029875135.1	JAPMOH000000000	SAMN31781919	AFAL1-T10	Alosa fallax
GCA_029874935.1	JAPMNP000000000	SAMN31781937	ABoyeriT8-24	Atherina boyeri
GCA_030220045.1	JASGAU000000000	SAMN34074043	AqLg6	Australoheros facetus
GCA_030220025.1	JASGAT000000000	SAMN34074046	JL_230314	Chelon auratus
GCA_029874265.1	JAPMNY000000000	SAMN31781928	CLAB	Chelon labrosus
GCA_029874045.1	JAPMNQ000000000	SAMN31781936	1908	Chelon ramada
GCA_029582295.1	JAPPTR000000000	SAMN31781909	ENV1919	Cobitis paludica
GCA_029874735.1	JAPMOP000000000	SAMN31781910	2013-PT	Cobitis vettonica
GCA_029874695.1	JAPMON000000000	SAMN31781912	ENV1256	Gobio lozanoi
GCA_029874575.1	JAPMOL000000000	SAMN31781914	ENV0576	Iberochondrostoma lemmingii
GCA_029874555.1	JAPMOJ000000000	SAMN31781916	Ilu16-Mug10	Iberochondrostoma lusitanicum
GCA_029874285.1	JAPMNX000000000	SAMN31781929	ENV1577	Iberochondrostoma lusitanicum
GCA_029874635.1	JAPMOM000000000	SAMN31781913	Aur19-OL-20	Lampetra auremensis
GCA_030220065.1	JASFWZ000000000	SAMN34074044	9505	Lampetra fluviatilis
GCA_029582275.1	JAPPTQ000000000	SAMN31781918	Plan19-long9	Lampetra planeri
GCA_029875015.1	JAPMOB000000000	SAMN31781925	LGib1-T2-1801	Lepomis gibbosus
GCA_029874325.1	JAPMNT000000000	SAMN31781933	1901	Luciobarbus bocagei
GCA_029874815.1	JAPMOO000000000	SAMN31781911	HG1325	Luciobarbus comizo
GCA_029874245.1	JAPMNW000000000	SAMN31781930	Mcef2-ENV1803	Mugil cephalus
GCA_029874595.1	JAPMNN000000000	SAMN31781939	PM1973	Parachondrostoma miegii
GCA_029874915.1	JAPMNV000000000	SAMN31781931	ENV1825	Platichthys flesus
GCA_029875035.1	JAPMNZ000000000	SAMN31781927	Pmic-T10-1895	Pomatoschistus microps
GCA_029874365.1	JAPMOF000000000	SAMN31781921	ENV1931	Pseudochondrostoma polylepis
GCA_029875115.1	JAPMOE000000000	SAMN31781922	FRISK0008	Rutilus rutilus
GCA_029874975.1	JAPMOA000000000	SAMN31781926	ENV1024	Silurus glanis
GCA_029874215.1	JAPMNS000000000	SAMN31781934	1942	Squalius alburnoides
GCA_029875075.1	JAPMOD000000000	SAMN31781923	ENV0013	Squalius carolitertii
GCA_029875055.1	JAPMOC000000000	SAMN31781924	FRISK0478	Squalius carolitertii
GCA_029874105.1	JAPMNO000000000	SAMN31781938	SC133GL	Squalius cephalus
GCA_029874195.1	JAPMNR000000000	SAMN31781935	553	Squalius pyrenaicus
GCA_029875095.1	JAPMOG000000000	SAMN31781920	SCEF-FRISK3481	Squalius sp. SCEF-FRISK3481
GCA_030220085.1	JASFWY000000000	SAMN34074045	CAVE-DANIO4	Squalius squalus

SRA Data Details

Parameter	Value
Data volume, Gbases	1,288
Data volume, Tbytes	0.44

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Shot gun sequencing of genomes of Iberian freshwater fish species

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