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Accession: PRJNA575122 ID: 575122

Giardia

Giardia duodenalis comparative genomics

Testing the impact of Whole Genome Amplification on genome comparison using the polyploid flagellated Giardia duodenalis as a model

Accession	PRJNA575122
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Giardia[Taxonomy ID: 5740] Eukaryota; Metamonada; Diplomonadida; Hexamitidae; Giardiinae; Giardia
Publications	Weisz F et al., "Testing the impact of Whole Genome Amplification on genome comparison using the polyploid flagellated Giardia duodenalis as a model.", Exp Parasitol, 2019 Dec;207:107776
Grants	"COMPARE" (Grant ID 643476, European Commission)
Submission	Registration date: 21-Oct-2019 COMPARE - Istituto Superiore Sanita
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	2
SRA Experiments	2
Publications
PubMed	1
Other datasets
BioSample	2
Assembly	2

Assembly details:

Assembly level

Number of Assemblies

Scaffold

2
2

Assembly	Level	WGS	BioSample	Isolate	Taxonomy
GCA_009192825.1		WBSI00000000	SAMN12878171	ZX15	Giardia intestinalis
GCA_009192805.1		WBSJ00000000	SAMN12878172	ISS17	Giardia intestinalis

SRA Data Details

Parameter	Value
Data volume, Gbases	11
Data volume, Mbytes	4730

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WGS master
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Giardia
Giardia
Giardia duodenalis comparative genomics

BioProject
txid5740[Organism:noexp] (1)
BioProject
txid1476598[Organism:noexp] (2)
Nucleotide
txid5740[Organism:exp] AND (alive[prop]) (5390)
Gene
464266[uid] (1)
Taxonomy

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