ID 735411 - BioProject

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Accession: PRJNA735411 ID: 735411

Microbial Ecology of sea lion gut microbiome at Comau Fjord, Northern Patagonia (42 S). Raw sequence reads.

This project seeks to understand how microbial communities respond to anthropogenic disturbances. More...

Accession	PRJNA735411
Data Type	Genome sequencing and assembly
Scope	Multispecies
Grants	"Revealing Spatial And Seasonal Patterns Of Microbial Genetic Diversity Through Metagenomics In A Human Impacted Ecosystem" (Grant ID 11160905, Agencia Nacional de Investigación y Desarrollo) "Deciphering the role of microbial dark matter in the Comau Fjord (42 ºS) through functional genome-resolved metagenomics" (Grant ID 1200834, Agencia Nacional de Investigación y Desarrollo) "Long-range transport of xenobiotics and microorganisms: Teleconnections and influence on terrestrial ecosystems" (Grant ID ACT192057, Agencia Nacional de Investigación y Desarrollo)
Submission	Registration date: 5-Jun-2021 Universidad Andres Bello, Castro Lab
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	166
SRA Experiments	30
Other datasets
BioSample	196
Assembly	166

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

166
166

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_029267055.1	JARIDX000000000	SAMN33569625	cluster2_bin.72	Actinobacillus sp.
GCA_029256965.1	JARIDU000000000	SAMN33569622	cluster2_bin.7	Actinobacillus sp.
GCA_029258075.1	JARHZQ000000000	SAMN33569514	cluster1_bin.5	Actinobacillus sp.
GCA_029257485.1	JARIBF000000000	SAMN33569555	cluster1_bin.9	Actinobacillus sp.
GCA_029264255.1	JARICC000000000	SAMN33569578	cluster2_bin.3	Anaerobiospirillum sp.
GCA_029258115.1	JARHZP000000000	SAMN33569513	cluster1_bin.49	Anaerobiospirillum sp.
GCA_029258325.1	JARHZF000000000	SAMN33569503	cluster1_bin.4	Anaerobiospirillum sp.
GCA_029267005.1	JARIEB000000000	SAMN33569629	cluster2_bin.76	Anaerofilum sp.
GCA_029257925.1	JARIAJ000000000	SAMN33569533	cluster1_bin.67	Anaerovoracaceae bacterium
GCA_029257465.1	JARIBG000000000	SAMN33569556	cluster2_bin.1	Arthrobacter sp.
GCA_029264185.1	JARICK000000000	SAMN33569586	cluster2_bin.37	Arthrobacter sp.
GCA_029264915.1	JARHYM000000000	SAMN33569484	cluster1_bin.21	Atopostipes sp.
GCA_029264085.1	JARICP000000000	SAMN33569591	cluster2_bin.41	Atopostipes sp.
GCA_029257245.1	JARICH000000000	SAMN33569583	cluster2_bin.34	Atopostipes sp.
GCA_029264135.1	JARICN000000000	SAMN33569589	cluster2_bin.4	Bacillales bacterium
GCA_029257405.1	JARIBO000000000	SAMN33569564	cluster2_bin.17	Bacillales bacterium
GCA_029257805.1	JARIAR000000000	SAMN33569541	cluster1_bin.74	Blautia sp.
GCA_029257775.1	JARIAQ000000000	SAMN33569540	cluster1_bin.73	Blautia sp.
GCA_029258395.1	JARHZB000000000	SAMN33569499	cluster1_bin.36	Blautia sp.
GCA_029264785.1	JARHYR000000000	SAMN33569489	cluster1_bin.26	Blautia sp.
GCA_029267195.1	JARIDI000000000	SAMN33569610	cluster2_bin.59	Blautia sp.
GCA_029267115.1	JARIDV000000000	SAMN33569623	cluster2_bin.70	Blautia sp.
GCA_029264335.1	JARIBX000000000	SAMN33569573	cluster2_bin.25	Blautia sp.
GCA_029263915.1	JARIDP000000000	SAMN33569617	cluster2_bin.65	Blautia sp.
GCA_029258575.1	JARHYI000000000	SAMN33569480	cluster1_bin.18	Brachyspira sp.
GCA_029258035.1	JARHZU000000000	SAMN33569518	cluster1_bin.53	Brachyspira sp.
GCA_029264835.1	JARHYQ000000000	SAMN33569488	cluster1_bin.25	Butyricicoccus sp.
GCA_029257685.1	JARIAV000000000	SAMN33569545	cluster1_bin.78	Butyricicoccus sp.
GCA_029256945.1	JARIDT000000000	SAMN33569621	cluster2_bin.69	Butyricicoccus sp.
GCA_029258545.1	JARHYH000000000	SAMN33569479	cluster1_bin.17	Campylobacter insulaenigrae
GCA_029258705.1	JARHXZ000000000	SAMN33569471	cluster1_bin.1	Campylobacter insulaenigrae
GCA_029257745.1	JARIAS000000000	SAMN33569542	cluster1_bin.75	Candidatus Cryptobacteroides sp.
GCA_029257565.1	JARIBC000000000	SAMN33569552	cluster1_bin.84	Candidatus Cryptobacteroides sp.
GCA_029257525.1	JARIBE000000000	SAMN33569554	cluster1_bin.86	Candidatus Dwaynesavagella sp.
GCA_029264685.1	JARHZW000000000	SAMN33569520	cluster1_bin.55	Candidatus Limivicinus sp.
GCA_029257825.1	JARIAO000000000	SAMN33569538	cluster1_bin.71	Candidatus Limivicinus sp.
GCA_029258515.1	JARHYK000000000	SAMN33569482	cluster1_bin.2	Clostridia bacterium
GCA_029256875.1	JARIEG000000000	SAMN33569634	cluster2_bin.80	Clostridium perfringens
GCA_029264405.1	JARIBN000000000	SAMN33569563	cluster2_bin.16	Clostridium perfringens
GCA_029264535.1	JARIBM000000000	SAMN33569562	cluster2_bin.15	Clostridium sp.
GCA_029263935.1	JARIDN000000000	SAMN33569615	cluster2_bin.63	Clostridium sp.
GCA_029258505.1	JARHYJ000000000	SAMN33569481	cluster1_bin.19	Clostridium sp.
GCA_029266975.1	JARIEC000000000	SAMN33569630	cluster2_bin.77	Clostridium sp.
GCA_029267215.1	JARIDH000000000	SAMN33569609	cluster2_bin.58	Clostridium sp.
GCA_029257045.1	JARIDB000000000	SAMN33569603	cluster2_bin.52	Clostridium sp.
GCA_029258435.1	JARHYZ000000000	SAMN33569497	cluster1_bin.34	Clostridium sp.
GCA_029258205.1	JARHZJ000000000	SAMN33569507	cluster1_bin.43	Clostridium sp.
GCA_029257915.1	JARIAK000000000	SAMN33569534	cluster1_bin.68	Clostridium sp.
GCA_029258175.1	JARHZM000000000	SAMN33569510	cluster1_bin.46	Collinsella sp.
GCA_029264555.1	JARIAC000000000	SAMN33569526	cluster1_bin.60	Collinsella sp.
GCA_029264355.1	JARIBW000000000	SAMN33569572	cluster2_bin.24	Collinsella sp.
GCA_029264035.1	JARICS000000000	SAMN33569594	cluster2_bin.44	Dysgonamonadaceae bacterium
GCA_029264295.1	JARIBY000000000	SAMN33569574	cluster2_bin.26	Edwardsiella tarda
GCA_029256925.1	JARIDW000000000	SAMN33569624	cluster2_bin.71	Edwardsiella tarda
GCA_029257145.1	JARICW000000000	SAMN33569598	cluster2_bin.48	Escherichia coli
GCA_029267135.1	JARIDS000000000	SAMN33569620	cluster2_bin.68	Escherichia coli
GCA_029258375.1	JARHZA000000000	SAMN33569498	cluster1_bin.35	Eubacterium sp.
GCA_029264005.1	JARIDL000000000	SAMN33569613	cluster2_bin.61	Eubacterium sp.
GCA_029264755.1	JARHYU000000000	SAMN33569492	cluster1_bin.29	Eubacterium sp.
GCA_029264675.1	JARHZX000000000	SAMN33569521	cluster1_bin.56	Faecalibacterium sp.
GCA_029264955.1	JARHYC000000000	SAMN33569474	cluster1_bin.12	Faecalibacterium sp.
GCA_029267145.1	JARIDK000000000	SAMN33569612	cluster2_bin.60	Faecalibacterium sp.
GCA_029264145.1	JARICO000000000	SAMN33569590	cluster2_bin.40	Faecalimonas sp.
GCA_029264305.1	JARICA000000000	SAMN33569576	cluster2_bin.28	Faecalimonas sp.
GCA_029264475.1	JARIAG000000000	SAMN33569530	cluster1_bin.64	Faecalimonas sp.
GCA_029258125.1	JARHZO000000000	SAMN33569512	cluster1_bin.48	Faecalimonas sp.
GCA_029257715.1	JARIAT000000000	SAMN33569543	cluster1_bin.76	Faecousia sp.
GCA_029257605.1	JARIAX000000000	SAMN33569547	cluster1_bin.8	Faecousia sp.
GCA_029257335.1	JARIBV000000000	SAMN33569571	cluster2_bin.23	Faecousia sp.
GCA_029258275.1	JARHZH000000000	SAMN33569505	cluster1_bin.41	Faecousia sp.
GCA_029258595.1	JARHYG000000000	SAMN33569478	cluster1_bin.16	Faecousia sp.
GCA_029258495.1	JARHYV000000000	SAMN33569493	cluster1_bin.3	Faecousia sp.
GCA_029257425.1	JARIBQ000000000	SAMN33569566	cluster2_bin.19	Faecousia sp.
GCA_029257305.1	JARICE000000000	SAMN33569580	cluster2_bin.31	Faecousia sp.
GCA_029257025.1	JARIDC000000000	SAMN33569604	cluster2_bin.53	Faecousia sp.
GCA_029264175.1	JARICF000000000	SAMN33569581	cluster2_bin.32	Faecousia sp.
GCA_029264815.1	JARHYS000000000	SAMN33569490	cluster1_bin.27	Faecousia sp.
GCA_029264875.1	JARHYO000000000	SAMN33569486	cluster1_bin.23	Faecousia sp.
GCA_029257205.1	JARICL000000000	SAMN33569587	cluster2_bin.38	Fusobacterium sp.
GCA_029258315.1	JARHZE000000000	SAMN33569502	cluster1_bin.39	Fusobacterium sp.
GCA_029258285.1	JARHZG000000000	SAMN33569504	cluster1_bin.40	Fusobacterium sp.
GCA_029257365.1	JARIBT000000000	SAMN33569569	cluster2_bin.21	Fusobacterium sp.
GCA_029257585.1	JARIBA000000000	SAMN33569550	cluster1_bin.82	Fusobacterium sp.
GCA_029257665.1	JARIAW000000000	SAMN33569546	cluster1_bin.79	Fusobacterium sp.
GCA_029264705.1	JARHZC000000000	SAMN33569500	cluster1_bin.37	Fusobacterium sp.
GCA_029264275.1	JARIBZ000000000	SAMN33569575	cluster2_bin.27	Fusobacterium sp.
GCA_029264395.1	JARIBK000000000	SAMN33569560	cluster2_bin.13	Fusobacterium sp.
GCA_029258665.1	JARHYB000000000	SAMN33569473	cluster1_bin.11	Fusobacterium sp.
GCA_029257755.1	JARIAP000000000	SAMN33569539	cluster1_bin.72	Helicobacter sp.
GCA_029257975.1	JARIAH000000000	SAMN33569531	cluster1_bin.65	Helicobacter sp.
GCA_029264615.1	JARHZZ000000000	SAMN33569523	cluster1_bin.58	Helicobacter sp.
GCA_029264935.1	JARHYL000000000	SAMN33569483	cluster1_bin.20	Helicobacter sp.
GCA_029264885.1	JARHYN000000000	SAMN33569485	cluster1_bin.22	Helicobacter sp.
GCA_029264655.1	JARHZY000000000	SAMN33569522	cluster1_bin.57	Helicobacter sp.
GCA_029264775.1	JARHYT000000000	SAMN33569491	cluster1_bin.28	Helicobacter sp.
GCA_029258405.1	JARHYY000000000	SAMN33569496	cluster1_bin.33	Helicobacteraceae bacterium
GCA_029257985.1	JARIAF000000000	SAMN33569529	cluster1_bin.63	Kurthia zopfii
GCA_029258095.1	JARHZR000000000	SAMN33569515	cluster1_bin.50	Kurthia zopfii
GCA_029258245.1	JARHZK000000000	SAMN33569508	cluster1_bin.44	Longicatena sp.
GCA_029258615.1	JARHYF000000000	SAMN33569477	cluster1_bin.15	Longicatena sp.
GCA_029264215.1	JARICD000000000	SAMN33569579	cluster2_bin.30	Longicatena sp.
GCA_029263975.1	JARICU000000000	SAMN33569596	cluster2_bin.46	Longicatena sp.
GCA_029264565.1	JARIAB000000000	SAMN33569525	cluster1_bin.6	Mailhella sp.
GCA_029258655.1	JARHYD000000000	SAMN33569475	cluster1_bin.13	Mailhella sp.
GCA_029258015.1	JARHZT000000000	SAMN33569517	cluster1_bin.52	Malacoplasma sp.
GCA_029257085.1	JARICZ000000000	SAMN33569601	cluster2_bin.50	Malacoplasma sp.
GCA_029258355.1	JARHZD000000000	SAMN33569501	cluster1_bin.38	Mucispirillum sp.
GCA_029257645.1	JARIAZ000000000	SAMN33569549	cluster1_bin.81	Mucispirillum sp.
GCA_029258155.1	JARHZN000000000	SAMN33569511	cluster1_bin.47	Mycoplasma sp.
GCA_029257945.1	JARIAI000000000	SAMN33569532	cluster1_bin.66	Mycoplasmoidaceae bacterium
GCA_029258475.1	JARHYW000000000	SAMN33569494	cluster1_bin.30	Mycoplasmoidaceae bacterium
GCA_029257845.1	JARIAM000000000	SAMN33569536	cluster1_bin.7	Mycoplasmoidaceae bacterium
GCA_029264505.1	JARIAE000000000	SAMN33569528	cluster1_bin.62	Mycoplasmoidaceae bacterium
GCA_029264225.1	JARICB000000000	SAMN33569577	cluster2_bin.29	Nocardioides sp.
GCA_029267235.1	JARIDE000000000	SAMN33569606	cluster2_bin.55	Oscillospiraceae bacterium
GCA_029264455.1	JARIBJ000000000	SAMN33569559	cluster2_bin.12	Oscillospiraceae bacterium
GCA_029257695.1	JARIAU000000000	SAMN33569544	cluster1_bin.77	Oscillospiraceae bacterium
GCA_029256985.1	JARIDQ000000000	SAMN33569618	cluster2_bin.66	Otariodibacter sp.
GCA_029257225.1	JARICJ000000000	SAMN33569585	cluster2_bin.36	Otariodibacter sp.
GCA_029264975.1	JARHYA000000000	SAMN33569472	cluster1_bin.10	Peptacetobacter sp.
GCA_029264695.1	JARHZV000000000	SAMN33569519	cluster1_bin.54	Peptacetobacter sp.
GCA_029264495.1	JARIBH000000000	SAMN33569557	cluster2_bin.10	Peptacetobacter sp.
GCA_029264375.1	JARIBP000000000	SAMN33569565	cluster2_bin.18	Peptacetobacter sp.
GCA_029257865.1	JARIAN000000000	SAMN33569537	cluster1_bin.70	Phocaeicola sp.
GCA_029257595.1	JARIAY000000000	SAMN33569548	cluster1_bin.80	Phocaeicola sp.
GCA_029258045.1	JARHZS000000000	SAMN33569516	cluster1_bin.51	Phocaeicola sp.
GCA_029264855.1	JARHYP000000000	SAMN33569487	cluster1_bin.24	Phocaeicola sp.
GCA_029267245.1	JARIDF000000000	SAMN33569607	cluster2_bin.56	Phocaeicola sp.
GCA_029258455.1	JARHYX000000000	SAMN33569495	cluster1_bin.32	Psychrobacter sp.
GCA_029257005.1	JARIDD000000000	SAMN33569605	cluster2_bin.54	Psychrobacter sp.
GCA_029256905.1	JARIEE000000000	SAMN33569632	cluster2_bin.79	Psychrobacter sp.
GCA_029256865.1	JARIEH000000000	SAMN33569635	cluster2_bin.81	Psychrobacter sp.
GCA_029264025.1	JARICR000000000	SAMN33569593	cluster2_bin.43	Psychrobacter sp.
GCA_029264635.1	JARIAA000000000	SAMN33569524	cluster1_bin.59	Psychrobacter sp.
GCA_029267175.1	JARIDJ000000000	SAMN33569611	cluster2_bin.6	Psychrobacter sp.
GCA_029258695.1	JARIBR000000000	SAMN33569567	cluster2_bin.2	Quadrisphaera sp.
GCA_029257185.1	JARICT000000000	SAMN33569595	cluster2_bin.45	Quadrisphaera sp.
GCA_029256845.1	JARIEI000000000	SAMN33569636	cluster2_bin.9	Ruminococcus sp.
GCA_029258225.1	JARHZI000000000	SAMN33569506	cluster1_bin.42	Ruminococcus sp.
GCA_029258195.1	JARHZL000000000	SAMN33569509	cluster1_bin.45	Ruminococcus sp.
GCA_029257505.1	JARIBD000000000	SAMN33569553	cluster1_bin.85	Ruminococcus sp.
GCA_029258605.1	JARHYE000000000	SAMN33569476	cluster1_bin.14	Ruminococcus sp.
GCA_029267075.1	JARIDY000000000	SAMN33569626	cluster2_bin.73	Ruminococcus sp.
GCA_029266995.1	JARIDZ000000000	SAMN33569627	cluster2_bin.74	Ruminococcus sp.
GCA_029266945.1	JARIED000000000	SAMN33569631	cluster2_bin.78	Slackia sp.
GCA_029264585.1	JARIAD000000000	SAMN33569527	cluster1_bin.61	Slackia sp.
GCA_029257535.1	JARIBB000000000	SAMN33569551	cluster1_bin.83	Slackia sp.
GCA_029264115.1	JARICM000000000	SAMN33569588	cluster2_bin.39	Sporosarcina sp.
GCA_029263985.1	JARIDG000000000	SAMN33569608	cluster2_bin.57	Sporosarcina sp.
GCA_029263895.1	JARIDO000000000	SAMN33569616	cluster2_bin.64	Sporosarcina sp.
GCA_029263945.1	JARIDM000000000	SAMN33569614	cluster2_bin.62	Sporosarcina sp.
GCA_029257285.1	JARICG000000000	SAMN33569582	cluster2_bin.33	Sporosarcina sp.
GCA_029257255.1	JARICI000000000	SAMN33569584	cluster2_bin.35	Sporosarcina sp.
GCA_029257165.1	JARICV000000000	SAMN33569597	cluster2_bin.47	Sporosarcina sp.
GCA_029257325.1	JARIBU000000000	SAMN33569570	cluster2_bin.22	Sporosarcina sp.
GCA_029257435.1	JARIBI000000000	SAMN33569558	cluster2_bin.11	Sporosarcina sp.
GCA_029267015.1	JARIEA000000000	SAMN33569628	cluster2_bin.75	Sporosarcina ureae
GCA_029267095.1	JARIDR000000000	SAMN33569619	cluster2_bin.67	Sporosarcina ureae
GCA_029257885.1	JARIAL000000000	SAMN33569535	cluster1_bin.69	Sutterella sp.
GCA_029264435.1	JARIBL000000000	SAMN33569561	cluster2_bin.14	Sutterella sp.
GCA_029257385.1	JARIBS000000000	SAMN33569568	cluster2_bin.20	Thiorhodococcus sp.
GCA_029257105.1	JARICY000000000	SAMN33569600	cluster2_bin.5	Thiorhodococcus sp.
GCA_029266915.1	JARIEF000000000	SAMN33569633	cluster2_bin.8	Tissierella sp.
GCA_029264075.1	JARICQ000000000	SAMN33569592	cluster2_bin.42	Tissierellaceae bacterium
GCA_029257065.1	JARIDA000000000	SAMN33569602	cluster2_bin.51	Tissierellaceae bacterium
GCA_029257125.1	JARICX000000000	SAMN33569599	cluster2_bin.49	Tissierellaceae bacterium

SRA Data Details

Parameter	Value
Data volume, Gbases	168
Data volume, Mbytes	55014

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Microbial Ecology of sea lion gut microbiome at Comau Fjord, Northern Patagonia (42 S). Raw sequence reads.

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