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Items: 15

1.

Metagenomic characterisation of the caecal microbiota of XCR1 wild-type and knockout chickens, with and without infectious bronchitis virus vaccination

Project data type: Genome sequencing
Scope:
Monoisolate
the roslin institute (university of edinburgh)
Accession:
PRJEB64517
ID:
1110482
2.

Weaning accelerates and transforms within-host adaptation in the infant gut microbiome

Project data type: Genome sequencing and assembly
Scope:
Multispecies
Washington University in Saint Louis
Accession:
PRJNA1060349
ID:
1060349
3.

EMG produced TPA metagenomics assembly of PRJNA693652 data set (The intestinal bacteriomes and viromes of pationts with recurrent CDI).

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
EMG
Accession:
PRJEB63401
ID:
986769
4.

Altitude-dependent climate zones shape the microbiome diversity of the scavenging indigenous chicken in Ethiopia

Ethiopian chicken caecal microbiota

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
addis ababa university
Accession:
PRJEB57055
ID:
983187
5.

HoloFood Chicken Ileum MAG catalogue

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
UNIVERSITY OF COPENHAGEN
Accession:
PRJEB55375
ID:
948274
6.

HoloFood Chicken Caecum MAG catalogue

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
UNIVERSITY OF COPENHAGEN
Accession:
PRJEB55374
ID:
948273
7.

Large-scale analysis of novel cellular microbes from the mammal gut biome

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
European Bioinformatics Institute
Accession:
PRJEB51895
ID:
918103
8.

EMG produced TPA metagenomics assembly of PRJEB33338 data set (Metagenomics of chicken cecal contents from fast and slower growing birds).

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
EMG
Accession:
PRJEB50262
ID:
798957
9.

Recovery of high-quality assembled genomes via single-cell genome-guided binning of metagenome assembly

Project data type: Genome sequencing and assembly
Scope:
Multispecies
bioBiome, Inc.
Accession:
PRJNA692334
ID:
692334
10.

Precise quantification and tracking of gut bacterial strains following fecal transplantation demonstrates long-term stable engraftment and predicts outcome

Project data type: Genome sequencing and assembly
Scope:
Multispecies
Icahn School of Medicine at Mount Sinai
Accession:
PRJNA637878
ID:
637878
11.

Metagenomics of chicken cecal contents

Metagenomics of chicken cecal contents from fast and slower growing birds

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
THE ROSLIN INSTITUTE
Accession:
PRJEB33338
ID:
554289
12.

Culturomics study of human gut microbiome

Project data type: Raw sequence reads
Scope:
Multispecies
South Dakota State University
Accession:
PRJNA494608
ID:
494608
13.

Whole genome sequencing of chicken gut anaerobes

Project data type: Genome sequencing and assembly
Scope:
Multispecies
Veterinary Research Institute
Accession:
PRJNA377666
ID:
377666
14.

Drancourtella massiliensis genome

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
IHU - Mediterranee Infection
Accession:
PRJEB9345
ID:
283600
15.

Refseq Prokaryotic Genome Annotation Project

Project data type: RefSeq Other
Scope:
Multispecies
NCBI
Accession:
PRJNA224116
ID:
224116

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