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Items: 1 to 20 of 287

1.

Acidic tailings with compost amendent metagenomic analysis

Project data type: Raw sequence reads
Scope:
Multispecies
Tongji University
Accession:
PRJNA1073008
ID:
1073008
2.

mixed culture metagenome

Alternative states by the difference of medium condition and the ecological stochasticity

Taxonomy:
mixed culture metagenome
Project data type: Metagenome
Scope:
Environment
Toju Laboratory, Center for Ecological Research, Kyoto University
Accession:
PRJDB15353
ID:
1060518
3.

Metagenomic profiling of canine gut microbial community

Comparative metagenomic profiling of canine gut microbial community using different sample preparation methodes

Project data type: Other
Scope:
Monoisolate
UNIVERSITY OF SZEGED
Accession:
PRJEB59610
ID:
1053582
4.

Investigating lactococcal strain diversity in undefined mesophilic starter M2

Project data type: Raw sequence reads
Scope:
Multispecies
University College Cork
Accession:
PRJNA1019710
ID:
1019710
5.

Investigating lactococcal strain diversity in undefined mesophilic starter M1

Project data type: Raw sequence reads
Scope:
Multispecies
University College Cork
Accession:
PRJNA1019656
ID:
1019656
6.

In vitro culture of human fecal microbiome, Clostridioides difficile and Clostridium scindens

Clostridium scindens secretome suppresses virulence gene expression of Clostridioides difficile in a bile-acid-independent manner

Taxonomy:
mixed culture metagenome
Project data type: Raw sequence reads
Scope:
Environment
University of Copenhagen
Accession:
PRJNA985904
ID:
985904
7.

marine bacteria

Marine bacteria Raw sequence reads

Taxonomy:
mixed culture metagenome
Project data type: Raw sequence reads
Scope:
Environment
Qingdao Institute of Bioenergy and Bioprocess Technology
Accession:
PRJNA978314
ID:
978314
8.

mixed culture metagenome

RNA sequencing of influenza-infected cells

Taxonomy:
mixed culture metagenome
Project data type: Transcriptome or Gene expression
Scope:
Multispecies
Iwate Medical University
Accession:
PRJDB15556
ID:
950242
9.

mixed culture metagenome

Polyhydroxyalkanoate accumulation in hydrogenotrophic denitrification reactors

Taxonomy:
mixed culture metagenome
Project data type: Targeted Locus (Loci)
Scope:
Environment
Graduate Faculty of Interdisciplinary Research, University of Yamanashi
Accession:
PRJDB11314
ID:
943370
10.

mixed culture metagenome

Mixed bacterial genomic DNA

Taxonomy:
mixed culture metagenome
Project data type: Metagenome
Scope:
Multiisolate
Public Health Agency of Canada
Accession:
PRJNA943266
ID:
943266
11.

Growth phase estimation for abundant bacterial populations sampled longitudinally from human stool metagenomes

Project data type: Raw sequence reads
Scope:
Multispecies
Institute for Systems Biology
Accession:
PRJNA942341
ID:
942341
12.

genomes, proteomes and 16s sequence of a nitrate-dependent methane/formate oxidation culture

Project data type: Raw sequence reads
Scope:
Multispecies
University of Queensland
Accession:
PRJNA939367
ID:
939367
13.

Vibrio campbellii

Vibrio campbellii whole-genome sequencing and assembly

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
national institute of biology
Accession:
PRJEB58817
ID:
931536
14.

Repeated invasions cause destabilisation of functional networks.

Project data type: Raw sequence reads
Scope:
Multispecies
Manchester Metropolitan Univeristy
Accession:
PRJNA906040
ID:
906040
15.

Lectin-Seq: a method to profile lectin-microbe interactions in native communities

Project data type: Metagenome
Scope:
Multispecies
MIT
Accession:
PRJNA905698
ID:
905698
16.

mixed culture metagenome

Enrichment and isolation of surfactin-degrading bacteria

Taxonomy:
mixed culture metagenome
Project data type: Targeted Locus (Loci)
Scope:
Environment
National Institute of Advanced Industrial Science and Technology
Accession:
PRJDB10782
ID:
900720
17.

From defaults to databases: parameter and database choice dramatically impact the performance of metagenomic taxonomic classification tools

Comparison of different tools for metagenome taxonomic classification

Project data type: Other
Scope:
Monoisolate
dalhousie university
Accession:
PRJEB55832
ID:
877929
18.

mixed culture metagenome

mixed culture metagenome Genome sequencing and assembly

Taxonomy:
mixed culture metagenome
Project data type: Genome sequencing and assembly
Scope:
Multiisolate
Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry of the Russian Academy of Sciences
Accession:
PRJNA865942
ID:
865942
19.

Bacteria

In-silico enrichment of bacterial plasmids by chromosomal depletion using nanopore adaptive sampling

Project data type: Genome sequencing and assembly
Scope:
Multispecies
University Potsdam, Hasso Plattner Institute
Accession:
PRJNA862336
ID:
862336
20.

mixed culture metagenome

Prokaryotic community analysis in a marine biogenic manganese oxide-producing bioreactor system utilizing polycaprolactone.

Taxonomy:
mixed culture metagenome
Project data type: Targeted Locus (Loci)
Scope:
Environment
Regional Environment Conservation Division, National Institute for Environmental Studies
Accession:
PRJDB13668
ID:
842950

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