Xenodontinae snakes (ID 625548) - BioProject

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Accession: PRJNA625548 ID: 625548

Xenodontinae snakes

Transcriptomes of Xenodontinae snakes (Dipsadidae family) focusing on venom matrix metalloproteinases.

This Bioproject provides transcriptomic data (raw sequence reads) from species within Xenodontinae subfamily of snakes (Dipsadidae family) and other external groups. More...

Accession	PRJNA625548
Data Type	Transcriptome or Gene expression
Scope	Multispecies
Publications	Heptinstall TC et al., "Venom phenotype conservation suggests integrated specialization in a lizard-eating snake.", Toxicon, 2023 Jun 15;229:107135
Grants	"Scales of biodiversity: Integrated studies of snake venom evolution and function across multiple levels of diversity" (Grant ID 2016/50127-5, Fundação de Amparo a Pesquisa do Estado de São Paulo)
Submission	Registration date: 15-Apr-2020 Instituto Butantan
Relevance	Evolution

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (TSA master)	1
SRA Experiments	88
Publications
PubMed	1
PMC	1
Other datasets
BioSample	121

SRA Data Details

Parameter	Value
Data volume, Gbases	496
Data volume, Tbytes	0.22

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PubMed
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SRA
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TSA master
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Xenodontinae snakes
Xenodontinae snakes
Transcriptomes of Xenodontinae snakes (Dipsadidae family) focusing on venom matrix metalloproteinases.

BioProject
txid121371[Organism:exp] (1)
BioProject
intercalation AND 1[s_discriminator] (0)
dbGaP
Chanodichthys sp. GF21 cytochrome c oxidase subunit I (COI) gene, partial cds; m...
Chanodichthys sp. GF21 cytochrome c oxidase subunit I (COI) gene, partial cds; mitochondrial
gi|1778007241|gb|MK843776.1|

Nucleotide
Uncultured bacterium clone OTU_134 16S ribosomal RNA gene, partial sequence
Uncultured bacterium clone OTU_134 16S ribosomal RNA gene, partial sequence
gi|1839337198|gb|MT445156.1|

Nucleotide

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