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Items: 1 to 20 of 224

1.

The effect of co-culture on MMTV-HER2 early lesion or primary tumor cell and alveolar macrophages

Umbrella project
Julio Aguirre-Ghiso, Cell Biology, Albert Einstein College of Medicine
Accession:
PRJNA1167295
ID:
1167295
2.

The effect of co-culture on MMTV-HER2 early lesion or primary tumor cell and alveolar macrophages [bulk RNA-seq]

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Julio Aguirre-Ghiso, Cell Biology, Albert Einstein College of Medicine
Accession:
PRJNA1167276
ID:
1167276
3.

A Promising Combination Therapy of Sintilimab and Regorafenib for Microsatellite Stable Advanced Colorectal Cancer: A Case Report

Project data type: Raw sequence reads
Scope:
Multispecies
Chengdu Seventh People's Hospital
Accession:
PRJNA1159007
ID:
1159007
4.

Comparative gene expression analysis in OCI-LY19 isogenic cell lines with SETD1B mutation or KMT2D+SETD1B double mutants.

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Memorial SLoan-Kettering Cancer Center
Accession:
PRJNA1140257
ID:
1140257
5.

Comparative gene expression analysis in OCI-LY8 isogenic cell lines with SETD1B mutation or WT control.

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Memorial SLoan-Kettering Cancer Center
Accession:
PRJNA1140256
ID:
1140256
6.

H3K5me3 modifications in OCI-LY19 cells with and without SETD1B mutations.

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Epigenomics
Scope:
Multiisolate
Memorial SLoan-Kettering Cancer Center
Accession:
PRJNA1140255
ID:
1140255
7.

A Promising Combination Therapy of Sintilimab and Regorafenib for Microsatellite Stable Advanced Colorectal Cancer: A Case Report

Project data type: Raw sequence reads
Scope:
Multispecies
Chengdu Seventh People's Hospital (Chengdu Tumorous Disease Quality Control Center)
Accession:
PRJNA1138092
ID:
1138092
8.

Single cell gene expression profiling of the SW620 colorectal cell line

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Monoisolate
Erasmus Medical Center
Accession:
PRJNA1128134
ID:
1128134
9.

Expression of p53 and p16 in esophageal squamous cell carcinoma

The objective of present study is to investigate if HPV infection has any association with p16, p53 and any of the clinicopathological parameters in esophageal squamous cell carcinoma

Project data type: Other
Scope:
Monoisolate
Indian Biological Data Centre
Accession:
PRJEB76245
ID:
1119903
10.

Complete Genomics Sequencing Data of Bulk and Single-cell from Glioblastoma multiform

We applied a multi-region sampling and single cell sequencing approach to assess mutational diversity and gain insight into tumor evolutionary dynamics in two primary GBMs, one harboring an EGFR amplification and the other was wild-type at EGFR locus according to the clinical information.

Project data type: Other
Scope:
Monoisolate
Beijing Genomics Institute, Shenzhen
Accession:
PRJEB9962
ID:
1112722
11.

Single-cell RNA sequencing comparison of CD4+, CD8+ and T-cell receptor γδ+ cutaneous T-cell lymphomas reveals subset-specific molecular phenotypes

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Other
Scope:
Multiisolate
Department of Dermatology, Medical University of Vienna
Accession:
PRJNA1108611
ID:
1108611
12.

Adjuvant COX inhibition augments STING signaling and cytolytic T cell infiltration in irradiated murine 4T1 TNBC tumors

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
CIL, CCR, NCI
Accession:
PRJNA1103830
ID:
1103830
13.

Whole transcriptome RNA-seq of primary desmoid tumors

Project data type: Raw sequence reads
Scope:
Multispecies
Stanford University
Accession:
PRJNA1099876
ID:
1099876
14.

Combined bioinformatic and clinical assay uncovers resistance and susceptibility mechanisms of human glioblastomas to temozolomide and identifies new survival biomarkers outperforming MGMT promoter methylation

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
I.M. Sechenov First Moscow State Medical University
Accession:
PRJNA1099686
ID:
1099686
15.

Global gene expression profile of colon biopsy samples from healthy patients and colorectal cancer.

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Genomics & Bioinformatics Core Facility, Centro de Investigación Biomédica de La Rioja
Accession:
PRJNA1089512
ID:
1089512
16.

Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics - Slide-Seq

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Other
Scope:
Multiisolate
Regev Lab, Broad Institute
Accession:
PRJNA1083531
ID:
1083531
17.

Genomic Analysis of Human Brain Metastases Treated with Stereotactic Radiosurgery Reveals Unique Signature Based on Treatment Failure. [WES]

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Other
Scope:
Multiisolate
UW-Madison
Accession:
PRJNA1080558
ID:
1080558
18.

Genomic Analysis of Human Brain Metastases Treated with Stereotactic Radiosurgery Reveals Unique Signature Based on Treatment Failure. [RNA-Seq]

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
UW-Madison
Accession:
PRJNA1079731
ID:
1079731
19.

Spatial analysis of microRNA regulation at defined tumor hypoxia levels reveals biological traits of aggressive prostate cancer

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Department of Radiation Biology, Oslo University Hospital
Accession:
PRJNA1079327
ID:
1079327
20.

Th17 cells secrete TWEAK to trigger epithelial-mesenchymal transition and promote colorectal cancer liver metastasis (WES)

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Variation
Scope:
Multiisolate
Sun Yat-sen University First Affiliated Hospital
Accession:
PRJNA1074096
ID:
1074096

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