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Items: 1 to 20 of 36

1.

Translational profiling of stress-induced small proteins uncovers a connection among distinct signaling systems

Taxonomy:
Escherichia coli
Project data type: Other
Scope:
Multiisolate
Yadavalli, Genetics, RUTGERS UNIVERSITY
Accession:
PRJNA1156803
ID:
1156803

2.

Detection of allele-specific expression in spatial transcriptomics with spASE

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Harvard
Accession:
PRJNA1117495
ID:
1117495

3.

Stimulation of immunity-linked genes by membrane disruption is linked to Golgi function and the ARF-1 GTPase

Taxonomy:
Caenorhabditis elegans
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Amy Walker Lab, UMass Medical School
Accession:
PRJNA1013344
ID:
1013344

4.

Ilex dabieshanensis

Transcriptome and expression analysis of genes related to reg-ulatory mechanisms in holly (Ilex dabieshanensis) under cold stress

Taxonomy:
Ilex dabieshanensis
Project data type: Raw sequence reads
Scope:
Monoisolate
The Institute of Botany, Jiangsu Province and Chinese Academy of Science
Accession:
PRJNA897070
ID:
897070

5.

Identification of cross-species preserved cis-regulatory elements containing type 2 diabetes GWAS variants (pcHiC)

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Other
Scope:
Multiisolate
The Bult Lab, The Jackson Laboratory
Accession:
PRJNA883960
ID:
883960

6.

Identification of cross-species preserved cis-regulatory elements containing type 2 diabetes GWAS variants

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Epigenomics
Scope:
Multiisolate
The Bult Lab, The Jackson Laboratory
Accession:
PRJNA864032
ID:
864032

7.

Alteration of global transcription by the artificial sweetener acesulfame K in Acinetobacter baumannii AB5075

Taxonomy:
Acinetobacter baumannii AB5075
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Ronan McCarthy lab (RMC), Life Sciences, Brunel University London
Accession:
PRJNA821209
ID:
821209

8.

Role of HNF4a in osteoblasts [ChIP-seq]

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Epigenomics
Scope:
Multiisolate
David Lab, Medicine, Northwestern University
Accession:
PRJNA786625
ID:
786625

9.

Antimicrobial resistance in brown bears

The oral microbiota of wild bears in Sweden reflects the history of antibiotic use by humans

Project data type: Other
Scope:
Monoisolate
Norwegian University of Science and Technology
Accession:
PRJEB42014
ID:
741169

10.

Mycobacteria excises DNA damage in 12- or 13-nucleotide-long oligomers by prokaryotic-type dual incisions and performs transcription-coupled repair

Taxonomy:
Mycolicibacterium smegmatis
Project data type: Other
Scope:
Multiisolate
Aziz Sancar, Biochemistry & Biophysics, University of North Carolina at Chapel Hill
Accession:
PRJNA667476
ID:
667476

11.

Genotyping-by-sequencing and ecological niche modeling illuminate phylogeography, admixture, and Pleistocene range dynamics in quaking aspen (Populus tremuloides)

Project data type: Raw sequence reads
Scope:
Multispecies
Virginia Commonwealth University
Accession:
PRJNA615644
ID:
615644

12.

Human Variation in Gingival Inflammation (HVGI) Study

Project data type: Raw sequence reads
Scope:
Multispecies
University of Washington
Accession:
PRJNA615201
ID:
615201

13.

Topo-Seq application for topoisomerases binding sites identification with a single-nucleotide resolution

Taxonomy:
Escherichia coli
Project data type: Epigenomics
Scope:
Multiisolate
Life Sciences, Skolkovo Institute of Science and Technology
Accession:
PRJNA481368
ID:
481368

14.

Chlorocebus sabaeus

Effect annotated whole genome variants for 163 vervet monkeys (SNPs, Indels, and macaque fixed differences)

Taxonomy:
Chlorocebus sabaeus (green monkey)
Project data type: Other
Scope:
Monoisolate
European Bioinformatics Institute
Accession:
PRJEB22989
ID:
417443

15.

Ogye body map RRBS data

Organism:
Gallus gallus
Taxonomy:
Gallus gallus (chicken)
Project data type: Epigenomics
Scope:
Multiisolate
Department of Life Science, Hanyang University
Accession:
PRJNA412432
ID:
412432

16.

Ogye body map RNA-seq data

Organism:
Gallus gallus
Taxonomy:
Gallus gallus (chicken)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Department of Life Science, Hanyang University
Accession:
PRJNA412404
ID:
412404

17.

Chlamydomonas reinhardtii strain:CC125

Transcriptome analysis of triacylglycerol (TAG) production in non-nitrogen starved algae Chlamydomonas reinhardtii using small molecule chemical modulators

Taxonomy:
Chlamydomonas reinhardtii
Project data type: Transcriptome or Gene expression
Scope:
Monoisolate
University of Nebraska Lincoln
Accession:
PRJNA324451
ID:
324451

18.

ARK: Aggregate of Reads by K-Means for Estimation of Bacterial Community Composition

Project data type: Other
Scope:
Monoisolate
OREGON STATE UNIVERSITY , CORVALLIS, OREGON, UNITED STATES
Accession:
PRJEB9828
ID:
289326

19.

Homo sapiens

IRF4, a master transcription factor, regulates genes involved in BCR signaling, antigen processing and presentation, and GC development [ChIP-chip]

Taxonomy:
Homo sapiens (human)
Project data type: Epigenomics
Scope:
Multiisolate
Genetics, Yale University
Accession:
PRJNA270596
ID:
270596

20.

Refseq Prokaryotic Genome Annotation Project

Project data type: RefSeq Other
Scope:
Multispecies
NCBI
Accession:
PRJNA224116
ID:
224116

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