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Items: 1 to 20 of 37

1.

16S rRNA gene amplicon sequencing

Project data type: Raw sequence reads
Scope:
Multispecies
Nanjing Agriculture University
Accession:
PRJNA1178134
ID:
1178134

2.

Zosterops RADseq data

Project data type: Raw sequence reads
Scope:
Multispecies
University of Kansas
Accession:
PRJNA1079333
ID:
1079333

3.

ONCOLINER tumorized precision dataset

Tumorized precision dataset for ONCOLINER: A new solution for monitoring, improving, and harmonizing somatic variant calling across genomic oncology centers

Project data type: Other
Scope:
Monoisolate
Barcelona Supercomputing Center - Centro Nacional de Supercomputacion
Accession:
PRJEB68324
ID:
1037442

4.

Identification of cross-species preserved cis-regulatory elements containing type 2 diabetes GWAS variants (pcHiC)

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Other
Scope:
Multiisolate
The Bult Lab, The Jackson Laboratory
Accession:
PRJNA883960
ID:
883960

5.

Identification of cross-species preserved cis-regulatory elements containing type 2 diabetes GWAS variants

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Epigenomics
Scope:
Multiisolate
The Bult Lab, The Jackson Laboratory
Accession:
PRJNA864032
ID:
864032

6.

Exome capture sequencing of wild barley (Hordeum spontaneum) from Israel

Project data type: Other
Scope:
Monoisolate
The James Hutton Institute, Scotland, United Kingdom
Accession:
PRJEB53543
ID:
850251

7.

Intratumoral mregDC and Tfh-like niches enable local reinvigoration of CD8 T cells following PD-1 blockade

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Other
Scope:
Multiisolate
ImmunoBio, Human Immune Monitoring Center
Accession:
PRJNA850077
ID:
850077

8.

scATAC-seq over multiple time points of heart development in WT C57Bl6/J embryos and in Tbx1 mutant mice (Tbx1 KO)

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Epigenomics
Scope:
Multiisolate
Gladstone Institutes
Accession:
PRJNA815971
ID:
815971

9.

HIV-1 J-Lat 10.6 Nanopore MinION R9.4.1 and R10.3 sequencing

Project data type: Raw sequence reads
Scope:
Multispecies
Drexel University
Accession:
PRJNA812612
ID:
812612

10.

Transcriptome data from tomato parthenocarpic mutants lacking Tomato APETALA3 (TAP3)

Organism:
Solanum lycopersicum
Taxonomy:
Solanum lycopersicum (tomato)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Center for Sustainable Resource Science, RIKEN
Accession:
PRJNA741939
ID:
741939

11.

Transcriptome data from tomato parthenocarpic mutants lacking Aux/IAA transcription factor SlIAA9

Organism:
Solanum lycopersicum
Taxonomy:
Solanum lycopersicum (tomato)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Center for Sustainable Resource Science, RIKEN
Accession:
PRJNA741938
ID:
741938

12.

Antimicrobial resistance in brown bears

The oral microbiota of wild bears in Sweden reflects the history of antibiotic use by humans

Project data type: Other
Scope:
Monoisolate
Norwegian University of Science and Technology
Accession:
PRJEB42014
ID:
741169

13.

Mycobacteria excises DNA damage in 12- or 13-nucleotide-long oligomers by prokaryotic-type dual incisions and performs transcription-coupled repair

Taxonomy:
Mycolicibacterium smegmatis
Project data type: Other
Scope:
Multiisolate
Aziz Sancar, Biochemistry & Biophysics, University of North Carolina at Chapel Hill
Accession:
PRJNA667476
ID:
667476

14.

food fermentation metagenome

Metagenome-Assembled Genomes from cocoa beans fermentation

Taxonomy:
food fermentation metagenome
Project data type: Genome sequencing
Scope:
Environment
FCFRP
Accession:
PRJNA659258
ID:
659258

15.

Utility of targeted sequence capture for phylogenomics in rapid, recent angiosperm radiations: Neotropical Burmeistera bellflowers as a case study

Project data type: Raw sequence reads
Scope:
Multispecies
University of Missouri-St. Louis
Accession:
PRJNA623031
ID:
623031

16.

Genotyping-by-sequencing and ecological niche modeling illuminate phylogeography, admixture, and Pleistocene range dynamics in quaking aspen (Populus tremuloides)

Project data type: Raw sequence reads
Scope:
Multispecies
Virginia Commonwealth University
Accession:
PRJNA615644
ID:
615644

17.

Human Variation in Gingival Inflammation (HVGI) Study

Project data type: Raw sequence reads
Scope:
Multispecies
University of Washington
Accession:
PRJNA615201
ID:
615201

18.

Chlorocebus sabaeus

Effect annotated whole genome variants for 163 vervet monkeys (SNPs, Indels, and macaque fixed differences)

Taxonomy:
Chlorocebus sabaeus (green monkey)
Project data type: Other
Scope:
Monoisolate
European Bioinformatics Institute
Accession:
PRJEB22989
ID:
417443

19.

Ogye body map RRBS data

Organism:
Gallus gallus
Taxonomy:
Gallus gallus (chicken)
Project data type: Epigenomics
Scope:
Multiisolate
Department of Life Science, Hanyang University
Accession:
PRJNA412432
ID:
412432

20.

Ogye body map RNA-seq data

Organism:
Gallus gallus
Taxonomy:
Gallus gallus (chicken)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Department of Life Science, Hanyang University
Accession:
PRJNA412404
ID:
412404

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