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1.

16S rRNA gene amplicon sequencing

Project data type: Raw sequence reads
Scope:
Multispecies
Nanjing Agriculture University
Accession:
PRJNA1178134
ID:
1178134
2.

Camu-Camu-Shotgun_Human

Camu-camu decreases steatosis and markers of liver injury (Shotgun sequencing).

Project data type: Other
Scope:
Monoisolate
LAVAL UNIVERSITY
Accession:
PRJEB76307
ID:
1144330
3.

Camu-Camu_16S_Human

Camu-camu decreases steatosis and markers of liver injury (16S sequencing).

Project data type: Other
Scope:
Monoisolate
LAVAL UNIVERSITY
Accession:
PRJEB76302
ID:
1144329
4.

Microglia - astrocyte cross-talk in the amyloid plaque niche of an Alzheimer’s disease mouse model as revealed by spatial transcriptomics (Stereo-seq Spatial Transcriptomics)

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Other
Scope:
Multiisolate
Laboratory for the Research of Neurodegenerative Diseases, VIB-KU Leuven Center for Brain & Disease Research, KULeuven
Accession:
PRJNA1099247
ID:
1099247
5.

Single Nucleotide Polymorphism (SNP) and Antibody-based Cell Sorting (SNACS): A tool for demultiplexing single-cell DNA sequencing data

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Other
Scope:
Multiisolate
Smith Lab, Medicine, University of California, San Francisco
Accession:
PRJNA1073979
ID:
1073979
6.

The pleiotropic phenotype of FlbA of Aspergillus niger is explained in part by the activity of seven of its downstream-regulated transcription factors.

Taxonomy:
Aspergillus niger
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Microbiology, Biology, Utrecht University
Accession:
PRJNA1069676
ID:
1069676
7.

INSaFLU-TELEVIR benchmark data

Project data type: Other
Scope:
Monoisolate
NATIONAL INSTITUTE OF HEALTH DR. RICARDO JORGE
Accession:
PRJEB67829
ID:
1069490
8.

An improved protocol for targeted differentiation of human iPSCs into HLA-G expressing trophoblasts cells enabling modelling of placenta-related disorders.

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
LEBAO, Hannover Medical School
Accession:
PRJNA983790
ID:
983790
9.

Single-cell RNA-sequencing of the mouse Dorsomedial Hypothalamic Nucleus (DMH)

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Pool Lab, Neuroscience, University of Texas Southwestern Medical Center
Accession:
PRJNA971261
ID:
971261
10.

De novo genome assembly of 36 Mycoplasmopsis bovis strains

Project data type: Genome sequencing and assembly
Scope:
Multispecies
RNA Bioinformatics and High-Throughput Analysis Friedrich Schiller University Jena
Accession:
PRJNA954308
ID:
954308
11.

Strand-seq of human embryonic stem cells and differentiated cells in ATRX wt and ATRX ko cells

Project data type: Other
Scope:
Monoisolate
European Bioinformatics Institute
Accession:
PRJEB59562
ID:
936367
12.

Genome Assembly and annotation of Acanthoscelides obtectus

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
Evolutionary Biology Centre
Accession:
PRJEB51445
ID:
926084
13.

Molecular mechanisms in Murine Syngeneic Leukemia Stem Cells

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Gazit, The Shraga Segal dept. of Microbiology, Immunology, and Genetics, Ben-Gurion University of the Negev
Accession:
PRJNA911837
ID:
911837
14.

A flexible model for correlated count data, with application to analysis of gene expression differences in multi-condition experiments

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Nicolas Chevrier, Pritzker School of Molecular Engineering, The University of Chicago
Accession:
PRJNA886428
ID:
886428
15.

Identification of aceNKPs, a committed common progenitor of the ILC1 and NK cell continuum

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Monoisolate
MRC Laboratory of Molecular Biology
Accession:
PRJNA882478
ID:
882478
16.

Transcriptional constraint of EWS/FLI by an ETS transcription factor promotes Ewing sarcoma growth [CUT&RUN]

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Epigenomics
Scope:
Multiisolate
Stegmaier Lab., Pediatric Oncology, Dana-Farber Cancer Institute
Accession:
PRJNA872360
ID:
872360
17.

Investigating plasma circulating miRNA in dairy cows receiving essential fatty acids and/or conjugated linoleic acid during the transition to lactation

Project data type: Other
Scope:
Monoisolate
European Bioinformatics Institute
Accession:
PRJEB52789
ID:
866455
18.

Identification of cross-species preserved cis-regulatory elements containing type 2 diabetes GWAS variants

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Epigenomics
Scope:
Multiisolate
The Bult Lab, The Jackson Laboratory
Accession:
PRJNA864032
ID:
864032
19.

Oryza sativa cultivar:BPT 5204

Oryza sativa cultivar:BPT 5204 Raw sequence reads

Organism:
Oryza sativa
Taxonomy:
Oryza sativa (Asian cultivated rice)
Project data type: Raw sequence reads
Scope:
Monoisolate
ICAR-Indian Institute of Rice Research
Accession:
PRJNA851222
ID:
851222
20.

Serum proteome analysis of systemic JIA and related lung disease identifies distinct inflammatory programs and biomarkers

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Proteome
Scope:
Multiisolate
Children's Hospital of Philadelphia
Accession:
PRJNA810870
ID:
810870

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