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Organizing biological data

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The following terms were not found in BioProject: @jyp24, parallelop.

Select item 10966921.

Replacement of Arabidopsis H2A.Z with human H2A.Z orthologs reveals extensive functional conservation and limited importance of the N-terminal tail sequence for Arabidopsis development (WT, h2a.z + HsH2A.Z. RNA-Seq)

Organism:: Arabidopsis thaliana

Taxonomy:: Arabidopsis thaliana (thale cress)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Biology, Emory University

Accession:: PRJNA1096692
ID:: 1096692

Select item 10966912.

Organism:: Arabidopsis thaliana

Taxonomy:: Arabidopsis thaliana (thale cress)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Biology, Emory University

Accession:: PRJNA1096691
ID:: 1096691

Select item 8647463.

Real-time quantitative PCR analysis of Nannochloropsis gaditana

Taxonomy:: Nannochloropsis gaditana

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Microalgae and Microbiomes Research Group, The Norwegian School of Fishery Sciences, The Arctic University of Norway

Accession:: PRJNA864746
ID:: 864746

Select item 6851664.

Global transcriptional response of P. falciparum NF54 early gametocytes treated with the Jumonji histone demethylase inhibitor JIB-04

Taxonomy:: Plasmodium falciparum NF54

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

University of Pretoria

Accession:: PRJNA685166
ID:: 685166

Select item 6612665.

Global transcriptomic changes in P. falciparum NF54 gametocytes treated with the histone demethylase inhibitor ML324

Organism:: Plasmodium falciparum

Taxonomy:: Plasmodium falciparum (malaria parasite P. falciparum)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Malaria Parasite Molecular Laboratory, Biochemistry, University of Pretoria

Accession:: PRJNA661266
ID:: 661266

Select item 5595206.

Analysis of the Clustered Protocadherin (cPcdh) Locus in Human Pluripotent Stem and Derived Cells [scRNA-seq]

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Michael G. Rosenfeld Laboratory, Medicine, UCSD

Accession:: PRJNA559520
ID:: 559520

Select item 5595197.

Analysis of the Clustered Protocadherin (cPcdh) Locus in Human Pluripotent Stem and Derived Cells [RNA-seq II our of II]

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Michael G. Rosenfeld Laboratory, Medicine, UCSD

Accession:: PRJNA559519
ID:: 559519

Select item 5595188.

Analysis of the Clustered Protocadherin (cPcdh) Locus in Human Pluripotent Stem and Derived Cells [ChIP-seq II our of II]

: Project data type: Epigenomics

Scope:: Multispecies

Michael G. Rosenfeld Laboratory, Medicine, UCSD

Accession:: PRJNA559518
ID:: 559518

Select item 4828359.

HIV-1 Vpu exerts broad immunosuppressive effects by inhibiting NF-κB-dependent gene expression

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Sanford Burnham Prebys Medical Discovery Institute

Accession:: PRJNA482835
ID:: 482835

Select item 47451010.

Race-specific transcriptome and Long non-coding RNA of ADT-resistant African-American prostate cancer cell models.

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Molecular Therapeutics and Cancer Health Disparity, Urology, University of Minnesota

Accession:: PRJNA474510
ID:: 474510

Select item 41829211.

Analysis of the Clustered Protocadherin (cPcdh) Locus in Human Pluripotent Stem and Derived Cells

: Umbrella project

Michael G. Rosenfeld Laboratory, Medicine, UCSD

Accession:: PRJNA418292
ID:: 418292

Select item 31888912.

Mus musculus

Genome-wide identification of H2A.Z-interacting proteins by bPPI-seq

Taxonomy:: Mus musculus (house mouse)

: Project data type: Other

Scope:: Multiisolate

National Heart, Lung, and Blood Institute, national Institute of Health

Accession:: PRJNA318889
ID:: 318889

Select item 26650113.

Gene expression profile associated to GOS consumption in Bifidobacterium pseudocatenulatum CECT 7765.

Transcriptome analysis of Bifidobacterium pseudocatenulatum CECT 7765 growing with Galacto-oligosaccharides (GOS) as carbon source.

: Project data type: Other

Scope:: Monoisolate

Institute of Agrochemistry and Food Technology, Valencia, Spain

Accession:: PRJEB6928
ID:: 266501

Select item 22231514.

Homo sapiens

Human monocyte derived macrophage microarray analysis

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Medicine, UCL

Accession:: PRJNA222315
ID:: 222315

Select item 16992215.

Homo sapiens

Autoantibodies are abundant in all human sera: a demographic characterization via protein microarrays

Taxonomy:: Homo sapiens (human)

: Project data type: Proteome

Scope:: Multiisolate

Nagele, NJISA, UMDNJ-SOM

Accession:: PRJNA169922
ID:: 169922

Select item 15423516.

Plasmodium falciparum 3D7

P. falciparum (lab strain 3d7) schizonts treated with A23187 vs P. falciparum (lab strain 3d7) reference RNA pool

Taxonomy:: Plasmodium falciparum 3D7

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Bozdech Lab (ZB Lab), Nanyang Technological University, School of Biological Sciences

Accession:: PRJNA154235
ID:: 154235

Select item 15423317.

Plasmodium falciparum 3D7

P. falciparum (lab strain 3d7) schizonts treated with ionomycin vs P. falciparum (lab strain 3d7) reference RNA pool

Taxonomy:: Plasmodium falciparum 3D7

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Bozdech Lab (ZB Lab), Nanyang Technological University, School of Biological Sciences

Accession:: PRJNA154233
ID:: 154233

Select item 15423118.

Plasmodium falciparum 3D7

P. falciparum (lab strain 3d7) schizonts untreated control vs P. falciparum (lab strain 3d7) reference RNA pool

Taxonomy:: Plasmodium falciparum 3D7

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Bozdech Lab (ZB Lab), Nanyang Technological University, School of Biological Sciences

Accession:: PRJNA154231
ID:: 154231

Select item 15422719.

Plasmodium falciparum 3D7

extracellular calcium chelation experiment_P. falciparum (lab strain 3d7) schizonts treated with EGTA and ionomycin vs P. falciparum (lab strain 3d7) reference RNA pool

Taxonomy:: Plasmodium falciparum 3D7

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Bozdech Lab (ZB Lab), Nanyang Technological University, School of Biological Sciences

Accession:: PRJNA154227
ID:: 154227

Select item 15422520.

Plasmodium falciparum 3D7

extracellular calcium chelation experiment_P. falciparum (lab strain 3d7) schizonts treated with ionomycin vs P. falciparum (lab strain 3d7) reference RNA pool