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1.

Functional roles of the seagrass holobiont change with plant development

Seagrass microbiome

Project data type: Other
Scope:
Monoisolate
UK Centre for Ecology and Hydrology
Accession:
PRJEB81660
ID:
1181432

2.

Salmonella enterica subsp. diarizonae serovar 17: l,v:z: A new serovar isolated from a nose-horned viper in Republic of Serbia.

Project data type: Other
Scope:
Monoisolate
Veterinary Specialized Institute Kraljevo
Accession:
PRJEB81563
ID:
1180433

3.

ScRNA-seq and scATAC-seq reveal that sertoli cells mediate spermatogenesis disorders through stage-specific communications in non-obstructive azoospermia

Project data type: Raw sequence reads
Scope:
Multispecies
The Eighth Affiliated Hospital, Sun Yat-sen University
Accession:
PRJNA1177103
ID:
1177103

4.

Epigenome mapping in quiescent cells reveals a key role for H3K4me3 in regulation of RNA polymerase II activity

Organism:
Schizosaccharomyces pombe
Taxonomy:
Schizosaccharomyces pombe (fission yeast)
Project data type: Epigenomics
Scope:
Multiisolate
KEK, Department of Medicine, Huddinge, Karolinska Institutet
Accession:
PRJNA1176134
ID:
1176134

5.

WGS of Zostera pacifica from Monterey, California

Project data type: Raw sequence reads
Scope:
Multispecies
National Science Foundation
Accession:
PRJNA1176131
ID:
1176131

6.

Limosilactobacillus fermentum strain:z-6 | isolate:Plant epidermis

Limosilactobacillus fermentum strain:z-6 | isolate:Plant epidermis Genome sequencing

Taxonomy:
Limosilactobacillus fermentum
Project data type: Genome sequencing
Scope:
Monoisolate
JiLin Agriculture Science and Technology college
Accession:
PRJNA1175067
ID:
1175067

7.

Pooled CRISPR screens with joint single-nucleus chromatin accessibility and transcriptome profiling [CUT&RUN]

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Epigenomics
Scope:
Multiisolate
New York Genome Center
Accession:
PRJNA1169554
ID:
1169554

8.

RNA sequencing of Ziziphus jujuba var. spinosa

Project data type: Raw sequence reads
Scope:
Multispecies
The Institute of Medicinal Plant Development (IMPLAD)
Accession:
PRJNA1169411
ID:
1169411

9.

Decoding the Multiple Functions of ZBP1 in the Mechanism of Sepsis-Induced Acute Lung Injury

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Dr. Fan's Lab, Department of Surgery, University of Pittsburgh School of Medicine
Accession:
PRJNA1168866
ID:
1168866

10.

Tephritidae

Five new genome assemblies of Tephritid pest species

Taxonomy:
Tephritidae (fruit flies)
Project data type: Genome sequencing
Scope:
Monoisolate
Royal Museum for Central Africa
Accession:
PRJDB18489
ID:
1165984

11.

TBK1 and IKKε protect target cells from IFNgamma-mediated inflammatory apoptosis

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Immunology, Mayo Clinic
Accession:
PRJNA1165745
ID:
1165745

12.

Arabidopsis assembly

A Comparison of Nanopore Data Types, Basecalling, and Assembly Algorithms: Whole Plant Genome Assembly and Methylation Analysis from a Single MinION Flowcell

Project data type: Genome sequencing
Scope:
Monoisolate
Earlham Institute
Accession:
PRJEB79853
ID:
1163640

13.

RNA-seq and ChIP-seq in Aegilops-infecting Zymoseptoria tritici and Zymoseptoria ardabiliae

Project data type: Raw sequence reads
Scope:
Multispecies
University of Kiel / MPI for Evolutionary Biology
Accession:
PRJNA1162778
ID:
1162778

14.

Population genomics of Iranian wheat- and Aegilops-infecting Zymoseptoria tritici isolates

Project data type: Raw sequence reads
Scope:
Multispecies
University of Kiel / MPI for Evolutionary Biology
Accession:
PRJNA1162695
ID:
1162695

15.

Type III interferons induce pyroptosis in gut epithelial cells and impair tissue repair upon intestinal injury.

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Boston Children's Hospital
Accession:
PRJNA1160875
ID:
1160875

16.

Evaluating the effect of secreted ribonucleases from Ustilago maydis on the extracellular RNA profile/repertoire of Zea mays during corn smut disease

Taxonomy:
Zea mays
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Meyers Lab, Meyers Lab, University of California - Davis
Accession:
PRJNA1160837
ID:
1160837

17.

MinD2 modulates cell shape and motility in the archaeon Haloferax volcanii

MinD2 Regulates Cell Shape and Motility in Haloferax volcanii via Chemotaxis and Archaellum Positioning

Project data type: Other
Scope:
Monoisolate
microbiology_ur
Accession:
PRJEB79934
ID:
1159683

18.

Type III interferons induce pyroptosis in gut epithelial cells and impair tissue repair upon intestinal injury.

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Zanoni Lab, Boston Children's Hospital and Harvard Medical School
Accession:
PRJNA1159204
ID:
1159204

19.

RNA-seq from Arabidopsis inflorescence

SDG2 regulates Arabidopsis inflorescence architecture through SWR1-ERECTA signaling pathway

Project data type: Other
Scope:
Monoisolate
GBC
Accession:
PRJEB47720
ID:
1158643

20.

Transcriptome analyses in leaf of brassica juncea

Project data type: Raw sequence reads
Scope:
Multispecies
Nanchong Academy of Agricultural Sciences
Accession:
PRJNA1157104
ID:
1157104

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