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Organizing biological data

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The following terms were not found in BioProject: opthorn, differentialop.

Select item 8999081.

Sex Chromosomes and Sex Phenotype Contribute to Biased DNA Methylation in Mouse Liver

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Epigenomics

Scope:: Multiisolate

Departments of Obstetrics and Gynecology and Human Genetics, McGill University

Accession:: PRJNA899908
ID:: 899908

Select item 8142042.

Genetic diversity and spatiotemporal dynamics of DENV-1 and DENV-2 infections during the last dengue outbreak in Mexico

: Project data type: Raw sequence reads

Scope:: Multispecies

Instituto Nacional de Salud Publica

Accession:: PRJNA814204
ID:: 814204

Select item 7680093.

RNA-seq of biopsies from the colons of patients with Crohn's Disease classified as healed versus non-healed according to different classification scores

: Project data type: Other

Scope:: Monoisolate

European Bioinformatics Institute

Accession:: PRJEB41167
ID:: 768009

Select item 7477204.

Fusarium oxysporum

Antagonism of Streptomyces against Fusarium oxysporum, causal agent of corm rot in gladiolus

Taxonomy:: Fusarium oxysporum

: Project data type: Other

Scope:: Monoisolate

CENTRO DE INVESTIGACION Y ASISTENCIA EN TECNOLOGIA Y DISENO DEL ESTADO DE JALISCO AC

Accession:: PRJNA747720
ID:: 747720

Select item 6937585.

GENOMIC STEPPE ANCESTRY IN SKELETONS FROM THE NEOLITHIC SINGLE GRAVE CULTURE IN DENMARK

: Project data type: Other

Scope:: Monoisolate

CENTRE FOR GEOGENETICS

Accession:: PRJEB40059
ID:: 693758

Select item 6891826.

RNA-seq of biopsies from the bowels of patients with Ulcerative Colitis classified as healed versus non-healed according to different classification scores

: Project data type: Other

Scope:: Monoisolate

European Bioinformatics Institute

Accession:: PRJEB41128
ID:: 689182

Select item 6577757.

Human mtDNA and Y-chromosome data from Hmong-Mien and Sino-Tibetan speaking groups from Thailand

Cultural variation impacts paternal and maternal genetic lineages of the Hmong-Mien and Sino-Tibetan groups from Thailand

: Project data type: Other

Scope:: Monoisolate

Max Planck Institute for Evolutionary Anthropology

Accession:: PRJEB36639
ID:: 657775

Select item 6351458.

RNA Sequencing on hippocampal tissue after ASO treatment overtime in MECP2 duplication mice

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Huda Y. Zoghbi Lab, Baylor College of Medicine

Accession:: PRJNA635145
ID:: 635145

Select item 5547949.

Deficiency in Ybx1 Leads to Postnatal Lethality and IBD-like Disease in Zebrafish

Organism:: Danio rerio

Taxonomy:: Danio rerio (zebrafish)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Genomics and Bioinformatics Core, Faculty of Health Sciences, University of Macau

Accession:: PRJNA554794
ID:: 554794

Select item 54260310.

A single gene underlies the dynamic evolution of poplar sex determination

: Project data type: Raw sequence reads

Scope:: Multispecies

Thuenen Institute of Forest Genetics

Accession:: PRJNA542603
ID:: 542603

Select item 44832211.

Ancient HBV

Ancient Hepatitis B viruses from the Bronze Age to the Medieval

: Project data type: Other

Scope:: Monoisolate

Center for Pathogen Evolution, University of Cambridge

Accession:: PRJEB25584
ID:: 448322

Select item 42220212.

Virome of rodents collected in Xinjiang, China

: Project data type: Raw sequence reads

Scope:: Multispecies

Institute of Military Veterinary

Accession:: PRJNA422202
ID:: 422202

Select item 39670713.

Kinship analysis in 2 Egyptian mummies from the 12th Dynasty

NGS (enriched and shotgun) data for 2 individual Egyptian mummies from the 12th Dynasty. Mummies provided by Manchester Museum and originally collected from middle Egypt in 1907. The aim was to look at kinship relationships (maternal and paternal) between them.

: Project data type: Other

Scope:: Monoisolate

University of Manchester

Accession:: PRJEB20294
ID:: 396707

Select item 31999914.

Vitis vinifera

Comparative genome hybridization between grapevine white-berried somatic variants and ancestral black-berried cultivars

Taxonomy:: Vitis vinifera (wine grape)

: Project data type: Variation

Scope:: Multiisolate

Instituto de las Ciencias de la Vid y del Vino, CSIC

Accession:: PRJNA319999
ID:: 319999

Select item 29286515.

The inhibition of N2O production by ocean acidification in cold temperate and polar waters

: Project data type: Other

Scope:: Multispecies

Guyot Hall, Geosciences, Princeton University

Accession:: PRJNA292865
ID:: 292865

Select item 28814916.

Homo sapiens

Dynamics of gene expression changes in epithelial and mesenchymal HMLER cell lines transitioning from suspension 3D culture to adhesion cultures

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Huang, Institute for Systems Biology

Accession:: PRJNA288149
ID:: 288149

Select item 27508817.

A recent bottleneck of Y chromosome diversity

Analysis of 456 geographically diverse high coverage sequences of Y chromosome, including 299 newly reported samples suggest recent bottleneck of Y chromosome diversity which coincides with a global change in culture

: Project data type: Other

Scope:: Monoisolate

INSTITUTE OF GENOMICS, UNIVERSITY OF TARTU, ESTONIA

Accession:: PRJEB8108
ID:: 275088

Select item 26928918.

Homo sapiens

Chromosomal meiotic segregation, embryonic developmental kinetics and DNA (hydroxy)methylation analysis reassure the safety of human oocyte vitrification in a high security closed system