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  • The following terms were not found in BioProject: W377.zeta, openopop.
Accession: PRJNA593424 ID: 593424

RNA-seq and Term-seq of Methanococcus maripaludis wild-type strain S2 and aCPSF1 depletion strain ▽aCPSF1

See Genome Information for Methanococcus maripaludis
Using the high-throughput strand-specific RNA-seq, we performed differential transcriptome analysis between strains S2 and ▽aCPSF1 Using the Term-seq method, we meatured the RNA 3'-end of strains S2 and ▽aCPSF1 Overall design: Triplicates for RNA-seq and duplicates for Term-seq on each strain. contributor: Novegene
AccessionPRJNA593424; GEO: GSE141346
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismMethanococcus maripaludis[Taxonomy ID: 39152]
Archaea; Methanobacteriati; Methanobacteriota; Methanomada group; Methanococci; Methanococcales; Methanococcaceae; Methanococcus; Methanococcus maripaludis
SubmissionRegistration date: 3-Dec-2019
Anaerobes research group, Institute if Microbiology, Chinese academy of science
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments10
Other datasets
BioSample10
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1
SRA Data Details
ParameterValue
Data volume, Gbases47
Data volume, Mbytes20093

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