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BioProject

Organizing biological data

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Items: 19

The following term was not found in BioProject: W3O.sigma.

Select item 11536081.

Exposure to the antiretroviral drug dolutegravir impairs structure and neurogenesis in a forebrain organoid model of human embryonic cortical development

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Department of Oral Medicine, University of Pennsylvania

Accession:: PRJNA1153608
ID:: 1153608

Select item 11356562.

EGFR-MEK1/2 cascade negatively regulates bactericidal function of bone marrow macrophages in mice with Staphylococcus aureus osteomyelitis

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Guangdong Provincial Key Laboratory of Bone and Cartilage, Division of Orthopedics and Traumatology, Department of Orthopedics, Nanfang Hospital, Southern Medical University

Accession:: PRJNA1135656
ID:: 1135656

Select item 9258593.

Cancer cell sedimentation in 3D cultures reveals active migration regulated by self-generated gradients and adhesion sites

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Bioengineering, McGill University

Accession:: PRJNA925859
ID:: 925859

Select item 8878984.

Fauna and microfauna

eDNA from Gulf of Mexico Ecosystems and Carbon Cruise 2021 (GOMECC-4)

Taxonomy:: marine metagenome

: Project data type: Targeted loci environmental

Scope:: Environment

NOAA's Atlantic Oceanographic and Meteorological Laboratory

Accession:: PRJNA887898
ID:: 887898

Select item 7788575.

Permitting the PRRSV infection into the porcine trophoblast cell line (PTR2) and its genome-wide mRNA and long non-coding RNA profiling

: Project data type: Raw sequence reads

Scope:: Multispecies

South China Agriculture University

Accession:: PRJNA778857
ID:: 778857

Select item 7502786.

Ablepharus ladacensis

Ablepharus ladacensis Transcriptome or Gene expression

Taxonomy:: Ablepharus ladacensis

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Zoological Research Museum Alexander Koenig

Accession:: PRJNA750278
ID:: 750278

Select item 7288857.

Comparative whole-genome transcriptome analysis in renal cell populations reveals high tissue specificity of MAPK/ERK-targets in embryonic kidney

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

University of Helsinki

Accession:: PRJNA728885
ID:: 728885

Select item 7051578.

Circulating non-coding RNAs in Huntington disease

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

NESMOS, University of Rome La Sapienza

Accession:: PRJNA705157
ID:: 705157

Select item 6880209.

Comparative shotgun metagenomics used in the assessment of the resistome, pathogens and their ecological control modes in full-scale urban wastewater membrane bioreactor and conventional activated sludge treatment plants

: Project data type: Raw sequence reads

Scope:: Multispecies

University of Thessaly

Accession:: PRJNA688020
ID:: 688020

Select item 65584010.

DNA methylation profile from three pairs of melanoma cell lines (WM115/W226-4 ; M4Be/M4BeS2 ; M4Be/TW12)

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Epigenomics

Scope:: Multiisolate

Laboratory for Epigenetics & Environment, CEA-Institut de Genomique, Centre National de Genotypage

Accession:: PRJNA655840
ID:: 655840

Select item 62974711.

Low-Dose Vertical Inhibition of the RAF-MEK-ERK Cascade Causes Apoptotic Death of KRAS-mutant Cancers

Concurrent RAF+ERK inhibition induces mesenchymal-to-epithelial transition, silences the MYC-dependent transcriptome

: Project data type: Other

Scope:: Monoisolate

445 N Fifth St

Accession:: PRJEB38063
ID:: 629747

Select item 53071012.

Homo sapiens isolate:Human melanoma cell line

Expression data of melanoma cell lines after SIRT2 depletion

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Faculty of Biology and Environmental Protection, University of Lodz

Accession:: PRJNA530710
ID:: 530710

Select item 51451713.

Gene expression profiling of L cells

: Project data type: Other

Scope:: Monoisolate

ETHZ

Accession:: PRJEB23754
ID:: 514517

Select item 49758714.

ezRAD sequencing in vesicomyid clams

: Project data type: Raw sequence reads

Scope:: Multispecies

Monterey Bay Aquarium Research Institute

Accession:: PRJNA497587
ID:: 497587

Select item 49645215.

Microbiota transmission

: Project data type: Other

Scope:: Monoisolate

UC BERKELEY

Accession:: PRJEB28216
ID:: 496452

Select item 33941016.

Recovery of biological soil crust-like microbial communities in previously submerged soils of Glen canyon

: Project data type: Other

Scope:: Monoisolate

University of California San Diego Microbiome Initiative

Accession:: PRJEB15163
ID:: 339410

Select item 10629117.

Arabidopsis thaliana

transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants

Taxonomy:: Arabidopsis thaliana (thale cress)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Max Planck Institute of Molecular Plant Physiology

Accession:: PRJNA106291
ID:: 106291

Select item 10407518.

Effect of heterotypic interaction between breast cancer cell line MDA-MB231 and CCL-171 fibroblast

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Medizinische Onkologie, University Hospital Basel

Accession:: PRJNA104075
ID:: 104075

Select item 9047519.

Macaca fascicularis

Gene Expression Profiling of Host Response in Models of Acute HIV infection

Taxonomy:: Macaca fascicularis (crab-eating macaque)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Laboratory of host responses, Division of Experimental Therapeutics, Toronto General Research Institute, University Health Network

Accession:: PRJNA90475
ID:: 90475

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