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Items: 1 to 20 of 168

1.

Bacterial diversity study from the rind of Vacherin Mont-d Or PDO cheeses

Project data type: Raw sequence reads
Scope:
Multispecies
Agroscope
Accession:
PRJNA1148047
ID:
1148047
2.

RNA-seq of live cell 3-D models with engineered genetic sub-types of lung cancer

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Emory University
Accession:
PRJNA1131001
ID:
1131001
3.

Multimodal profiling of human postnatal thymocytes using CITE-seq

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Other
Scope:
Multiisolate
Ghent University
Accession:
PRJNA1130891
ID:
1130891
4.

Metagenome of the Microbiome Associated with the Rhizosphere of Dactylorhiza traunsteineri

Project data type: Genome sequencing
Scope:
Multispecies
TU Wien
Accession:
PRJNA1124010
ID:
1124010
5.

Single cell RNA-sequencing of feline peripheral immune cells with V(D)J repertoire and cross species analysis of T lymphocytes

Organism:
Felis catus
Taxonomy:
Felis catus (domestic cat)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Pathology, Immunology, Microbiology, University of California, Davis
Accession:
PRJNA1111127
ID:
1111127
6.

CEBPA restricts alveolar type 2 cell plasticity during development and injury-repair [scATAC-seq]

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Epigenomics
Scope:
Multiisolate
Jichao Chen, Pulmonary Medicine, MD Anderson Cancer Center
Accession:
PRJNA1100986
ID:
1100986
7.

Atopic dermatitis complicated by recurrent eczema herpeticum is characterized by multiple, concurrent epidermal inflammatory endotypes

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Center for Genes, Environment, and Health, National Jewish Health
Accession:
PRJNA1090124
ID:
1090124
8.

Columba livia isolate:bColLiv1 | breed:racing homer

Columba livia (rock pigeon) genome, bColLiv1, maternal haplotype

Organism:
Columba livia
Taxonomy:
Columba livia (rock pigeon)
Project data type: Genome sequencing and assembly
Scope:
Monoisolate
Vertebrate Genomes Project
Accession:
PRJNA1054132
ID:
1054132
9.

Columba livia isolate:bColLiv1 | breed:racing homer

Columba livia (rock pigeon) genome, bColLiv1, paternal haplotype+W

Organism:
Columba livia
Taxonomy:
Columba livia (rock pigeon)
Project data type: Genome sequencing and assembly
Scope:
Monoisolate
Vertebrate Genomes Project
Accession:
PRJNA1054131
ID:
1054131
10.

Antenatal Glucocorticoid Exposure Induced Neurodegenerative Changes in the Fetal Ovine Hippocampal Transcriptome Independent of Pulmonary Immaturity

Organism:
Ovis aries
Taxonomy:
Ovis aries (sheep)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Bioinformatics Consulting and Training Platform, Genome Institute of Singapore
Accession:
PRJNA1046009
ID:
1046009
11.

Nynrin preserves hematopoietic stem cell function by inhibiting the mitochondrial permeability transition pore opening (RNA-Seq for Nynrin cko HSC)

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Institute of Life Sciences, Chongqing Medical University
Accession:
PRJNA1045292
ID:
1045292
12.

Adipose-tissue regulatory T cells are a consortium of subtypes that evolves with age and diet

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Other
Scope:
Multiisolate
CBDM, Microbiology and Immunobiology, Harvard Medical School
Accession:
PRJNA1044014
ID:
1044014
13.

human gut metagenome

Gut microbiota of 123 Japanese adults

Taxonomy:
human gut metagenome
Project data type: Targeted Locus (Loci)
Scope:
Multispecies
Laboratory for Microbiome Sciences, Center for Integrative Medical Sciences, RIKEN
Accession:
PRJDB16116
ID:
1019131
14.

human saliva metagenome

Salivary microbiota of 62 Japanese adults

Taxonomy:
human saliva metagenome
Project data type: Targeted Locus (Loci)
Scope:
Multispecies
Laboratory for Microbiome Sciences, Center for Integrative Medical Sciences, RIKEN
Accession:
PRJDB16115
ID:
1019130
15.

human saliva metagenome

Salivary microbiota of 272 Japanese adults

Taxonomy:
human saliva metagenome
Project data type: Targeted Locus (Loci)
Scope:
Multispecies
Laboratory for Microbiome Sciences, Center for Integrative Medical Sciences, RIKEN
Accession:
PRJDB16112
ID:
1019129
16.

Germinal centers continually recruit naïve T cells that alter the balance between follicular T helper and follicular regulatory T cells.

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Laboratory of Molecular Immunology, Immunology, Virology and Microbiology, The Rockefeller University
Accession:
PRJNA1005169
ID:
1005169
17.

mRNA transcript levels in E15.5, E17.5 and P1 Crb1KOCrb2ΔRPC against Crb1KO neuroretina, and in E15.5 Crb1KOCrb2ΔRPC against wild type neuroretina

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Wijnholds, Ophthalmology, Leiden University Medical Center
Accession:
PRJNA999329
ID:
999329
18.

Single-cell transcriptomes for paired uninflamed and inflamed mucosal tissues of CD patients

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Jingling Hospital, Medical School of Nanjing University
Accession:
PRJNA991422
ID:
991422
19.

Systematic investigation of mitochondrial transfer between cancer cells and T cells at single-cell resolution

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Other
Scope:
Multiisolate
Bo Li lab, Department of Pathology and Laboratory Medicine, The Children’s Hospital of Philadelphia, University of Pennsylvania
Accession:
PRJNA986887
ID:
986887
20.

Tracking of donor and recipient immune and leukemia phenotypes after allogeneic stem cell transplantation using mitochondrial DNA mutations. [ASAP-Seq 3]

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Other
Scope:
Multiisolate
Wu Lab, Medical Oncology, Dana-Farber Cancer Institute
Accession:
PRJNA982044
ID:
982044

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