ID 988909 - BioProject

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Accession: PRJNA988909 ID: 988909

Population-based surveillance of Pseudomonas aeruginosa causing bloodstream infections

An active population-based surveillance was performed to characterize P. aeruginosa bloodstream infections (BSIs) in a well-defined Canadian (Calgary) human population over a 9-year period (2010-2018).

Accession	PRJNA988909
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Peirano G et al., "Population-based genomic surveillance of Pseudomonas aeruginosa causing bloodstream infections in a large Canadian health region.", Eur J Clin Microbiol Infect Dis, 2024 Mar;43(3):501-510
Submission	Registration date: 29-Jun-2023 University of Calgary
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	160
Publications
PubMed	1
Other datasets
BioSample	167
Assembly	160

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

160
160

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_035969565.1	JAUMGY000000000	SAMN36031614	PA-10-08	Pseudomonas aeruginosa
GCA_035969505.1	JAUMGX000000000	SAMN36031641	PA-10-35	Pseudomonas aeruginosa
GCA_036320125.1	JAUHDX000000000	SAMN36031665	PA-14-22	Pseudomonas aeruginosa
GCA_036320385.1	JAUHFZ000000000	SAMN36031607	PA-10-01	Pseudomonas aeruginosa
GCA_036320365.1	JAUHFY000000000	SAMN36031608	PA-10-02	Pseudomonas aeruginosa
GCA_036320345.1	JAUHFW000000000	SAMN36031610	PA-10-04	Pseudomonas aeruginosa
GCA_036320325.1	JAUHFX000000000	SAMN36031609	PA-10-03	Pseudomonas aeruginosa
GCA_036320305.1	JAUHFM000000000	SAMN36031621	PA-10-15	Pseudomonas aeruginosa
GCA_036320285.1	JAUHFV000000000	SAMN36031611	PA-10-05	Pseudomonas aeruginosa
GCA_036320265.1	JAUHFR000000000	SAMN36031616	PA-10-10	Pseudomonas aeruginosa
GCA_036320225.1	JAUHFH000000000	SAMN36031626	PA-10-20	Pseudomonas aeruginosa
GCA_036320235.1	JAUHFL000000000	SAMN36031622	PA-10-16	Pseudomonas aeruginosa
GCA_036320205.1	JAUHFG000000000	SAMN36031627	PA-10-21	Pseudomonas aeruginosa
GCA_036320185.1	JAUHEG000000000	SAMN36031656	PA-14-13	Pseudomonas aeruginosa
GCA_036320165.1	JAUHEY000000000	SAMN36031635	PA-10-29	Pseudomonas aeruginosa
GCA_036322225.1	JAUHDF000000000	SAMN36031684	PA-14-41	Pseudomonas aeruginosa
GCA_036317705.1	JAUHFU000000000	SAMN36031612	PA-10-06	Pseudomonas aeruginosa
GCA_036317685.1	JAUHFS000000000	SAMN36031615	PA-10-09	Pseudomonas aeruginosa
GCA_036317665.1	JAUHFT000000000	SAMN36031613	PA-10-07	Pseudomonas aeruginosa
GCA_036317645.1	JAUHFP000000000	SAMN36031618	PA-10-12	Pseudomonas aeruginosa
GCA_036317625.1	JAUHFO000000000	SAMN36031619	PA-10-13	Pseudomonas aeruginosa
GCA_036317605.1	JAUHFQ000000000	SAMN36031617	PA-10-11	Pseudomonas aeruginosa
GCA_036317585.1	JAUHFN000000000	SAMN36031620	PA-10-14	Pseudomonas aeruginosa
GCA_036317565.1	JAUHFK000000000	SAMN36031623	PA-10-17	Pseudomonas aeruginosa
GCA_036317545.1	JAUHFI000000000	SAMN36031625	PA-10-19	Pseudomonas aeruginosa
GCA_036317515.1	JAUHFJ000000000	SAMN36031624	PA-10-18	Pseudomonas aeruginosa
GCA_036317505.1	JAUHFF000000000	SAMN36031628	PA-10-22	Pseudomonas aeruginosa
GCA_036317485.1	JAUHFD000000000	SAMN36031630	PA-10-24	Pseudomonas aeruginosa
GCA_036317465.1	JAUHFE000000000	SAMN36031629	PA-10-23	Pseudomonas aeruginosa
GCA_036317445.1	JAUHFC000000000	SAMN36031631	PA-10-25	Pseudomonas aeruginosa
GCA_036317425.1	JAUHFA000000000	SAMN36031633	PA-10-27	Pseudomonas aeruginosa
GCA_036317405.1	JAUHFB000000000	SAMN36031632	PA-10-26	Pseudomonas aeruginosa
GCA_036317385.1	JAUHEX000000000	SAMN36031636	PA-10-30	Pseudomonas aeruginosa
GCA_036317365.1	JAUHEZ000000000	SAMN36031634	PA-10-28	Pseudomonas aeruginosa
GCA_036317345.1	JAUHEW000000000	SAMN36031637	PA-10-31	Pseudomonas aeruginosa
GCA_036317325.1	JAUHEV000000000	SAMN36031638	PA-10-32	Pseudomonas aeruginosa
GCA_036317305.1	JAUHEU000000000	SAMN36031640	PA-10-34	Pseudomonas aeruginosa
GCA_036317285.1	JAUHES000000000	SAMN36031643	PA-10-37	Pseudomonas aeruginosa
GCA_036317265.1	JAUHET000000000	SAMN36031642	PA-10-36	Pseudomonas aeruginosa
GCA_036317245.1	JAUHER000000000	SAMN36031644	PA-14-01	Pseudomonas aeruginosa
GCA_036317225.1	JAUHEP000000000	SAMN36031646	PA-14-03	Pseudomonas aeruginosa
GCA_036317205.1	JAUHEQ000000000	SAMN36031645	PA-14-02	Pseudomonas aeruginosa
GCA_036317185.1	JAUHEO000000000	SAMN36031648	PA-14-05	Pseudomonas aeruginosa
GCA_036317165.1	JAUHEN000000000	SAMN36031649	PA-14-06	Pseudomonas aeruginosa
GCA_036317145.1	JAUHEM000000000	SAMN36031650	PA-14-07	Pseudomonas aeruginosa
GCA_036317105.1	JAUHEK000000000	SAMN36031652	PA-14-09	Pseudomonas aeruginosa
GCA_036317115.1	JAUHEL000000000	SAMN36031651	PA-14-08	Pseudomonas aeruginosa
GCA_036317085.1	JAUHEI000000000	SAMN36031654	PA-14-11	Pseudomonas aeruginosa
GCA_036317065.1	JAUHEJ000000000	SAMN36031653	PA-14-10	Pseudomonas aeruginosa
GCA_036317045.1	JAUHEH000000000	SAMN36031655	PA-14-12	Pseudomonas aeruginosa
GCA_036317025.1	JAUHEE000000000	SAMN36031658	PA-14-15	Pseudomonas aeruginosa
GCA_036317005.1	JAUHEC000000000	SAMN36031660	PA-14-17	Pseudomonas aeruginosa
GCA_036316985.1	JAUHEB000000000	SAMN36031661	PA-14-18	Pseudomonas aeruginosa
GCA_036316965.1	JAUHEF000000000	SAMN36031657	PA-14-14	Pseudomonas aeruginosa
GCA_036316945.1	JAUHED000000000	SAMN36031659	PA-14-16	Pseudomonas aeruginosa
GCA_036316925.1	JAUHDY000000000	SAMN36031664	PA-14-21	Pseudomonas aeruginosa
GCA_036316905.1	JAUHEA000000000	SAMN36031662	PA-14-19	Pseudomonas aeruginosa
GCA_036316885.1	JAUHDV000000000	SAMN36031667	PA-14-24	Pseudomonas aeruginosa
GCA_036316865.1	JAUHDW000000000	SAMN36031666	PA-14-23	Pseudomonas aeruginosa
GCA_036316845.1	JAUHDZ000000000	SAMN36031663	PA-14-20	Pseudomonas aeruginosa
GCA_036316825.1	JAUHDU000000000	SAMN36031668	PA-14-25	Pseudomonas aeruginosa
GCA_036316805.1	JAUHDT000000000	SAMN36031669	PA-14-26	Pseudomonas aeruginosa
GCA_036316785.1	JAUHDS000000000	SAMN36031670	PA-14-27	Pseudomonas aeruginosa
GCA_036316765.1	JAUHDQ000000000	SAMN36031672	PA-14-29	Pseudomonas aeruginosa
GCA_036316745.1	JAUHDR000000000	SAMN36031671	PA-14-28	Pseudomonas aeruginosa
GCA_036316725.1	JAUHDP000000000	SAMN36031673	PA-14-30	Pseudomonas aeruginosa
GCA_036316705.1	JAUHDO000000000	SAMN36031674	PA-14-31	Pseudomonas aeruginosa
GCA_036316685.1	JAUHDM000000000	SAMN36031676	PA-14-33	Pseudomonas aeruginosa
GCA_036316645.1	JAUHDL000000000	SAMN36031677	PA-14-34	Pseudomonas aeruginosa
GCA_036316665.1	JAUHDN000000000	SAMN36031675	PA-14-32	Pseudomonas aeruginosa
GCA_036316625.1	JAUHDK000000000	SAMN36031678	PA-14-35	Pseudomonas aeruginosa
GCA_036316605.1	JAUHDJ000000000	SAMN36031679	PA-14-36	Pseudomonas aeruginosa
GCA_036316585.1	JAUHDH000000000	SAMN36031682	PA-14-39	Pseudomonas aeruginosa
GCA_036316565.1	JAUHDI000000000	SAMN36031680	PA-14-37	Pseudomonas aeruginosa
GCA_036316545.1	JAUHDG000000000	SAMN36031683	PA-14-40	Pseudomonas aeruginosa
GCA_036316525.1	JAUHDE000000000	SAMN36031686	PA-14-43	Pseudomonas aeruginosa
GCA_036316505.1	JAUHDD000000000	SAMN36031687	PA-14-44	Pseudomonas aeruginosa
GCA_036316485.1	JAUHDC000000000	SAMN36031688	PA-14-45	Pseudomonas aeruginosa
GCA_036316465.1	JAUHDA000000000	SAMN36031690	PA-14-47	Pseudomonas aeruginosa
GCA_036316445.1	JAUHCZ000000000	SAMN36031691	PA-14-48	Pseudomonas aeruginosa
GCA_036316425.1	JAUHDB000000000	SAMN36031689	PA-14-46	Pseudomonas aeruginosa
GCA_036316405.1	JAUHCY000000000	SAMN36031692	PA-14-49	Pseudomonas aeruginosa
GCA_036316385.1	JAUHCV000000000	SAMN36031695	PA-14-52	Pseudomonas aeruginosa
GCA_036316365.1	JAUHCX000000000	SAMN36031693	PA-14-50	Pseudomonas aeruginosa
GCA_036316345.1	JAUHCW000000000	SAMN36031694	PA-14-51	Pseudomonas aeruginosa
GCA_036316325.1	JAUHCU000000000	SAMN36031696	PA-14-53	Pseudomonas aeruginosa
GCA_036316305.1	JAUHCT000000000	SAMN36031697	PA-14-54	Pseudomonas aeruginosa
GCA_036316285.1	JAUHCR000000000	SAMN36031699	PA-14-56	Pseudomonas aeruginosa
GCA_036316265.1	JAUHCS000000000	SAMN36031698	PA-14-55	Pseudomonas aeruginosa
GCA_036316245.1	JAUHCQ000000000	SAMN36031700	PA-18-01	Pseudomonas aeruginosa
GCA_036316225.1	JAUHCP000000000	SAMN36031701	PA-18-02	Pseudomonas aeruginosa
GCA_036316205.1	JAUHCO000000000	SAMN36031702	PA-18-03	Pseudomonas aeruginosa
GCA_036316175.1	JAUHCJ000000000	SAMN36031708	PA-18-09	Pseudomonas aeruginosa
GCA_036316165.1	JAUHCN000000000	SAMN36031703	PA-18-04	Pseudomonas aeruginosa
GCA_036316145.1	JAUHCM000000000	SAMN36031704	PA-18-05	Pseudomonas aeruginosa
GCA_036316125.1	JAUHCL000000000	SAMN36031705	PA-18-06	Pseudomonas aeruginosa
GCA_036316105.1	JAUHCK000000000	SAMN36031706	PA-18-07	Pseudomonas aeruginosa
GCA_036316085.1	JAUHCH000000000	SAMN36031710	PA-18-12	Pseudomonas aeruginosa
GCA_036316065.1	JAUHCG000000000	SAMN36031711	PA-18-13	Pseudomonas aeruginosa
GCA_036316045.1	JAUHCI000000000	SAMN36031709	PA-18-10	Pseudomonas aeruginosa
GCA_036316025.1	JAUHCF000000000	SAMN36031712	PA-18-14	Pseudomonas aeruginosa
GCA_036316005.1	JAUHCE000000000	SAMN36031713	PA-18-15	Pseudomonas aeruginosa
GCA_036315985.1	JAUHCD000000000	SAMN36031714	PA-18-16	Pseudomonas aeruginosa
GCA_036315965.1	JAUHCA000000000	SAMN36031717	PA-18-19	Pseudomonas aeruginosa
GCA_036315945.1	JAUHCC000000000	SAMN36031715	PA-18-17	Pseudomonas aeruginosa
GCA_036315925.1	JAUHCB000000000	SAMN36031716	PA-18-18	Pseudomonas aeruginosa
GCA_036315905.1	JAUHBZ000000000	SAMN36031718	PA-18-20	Pseudomonas aeruginosa
GCA_036315885.1	JAUHBY000000000	SAMN36031719	PA-18-21	Pseudomonas aeruginosa
GCA_036315865.1	JAUHBV000000000	SAMN36031722	PA-18-24	Pseudomonas aeruginosa
GCA_036315845.1	JAUHBW000000000	SAMN36031721	PA-18-23	Pseudomonas aeruginosa
GCA_036315825.1	JAUHBX000000000	SAMN36031720	PA-18-22	Pseudomonas aeruginosa
GCA_036315805.1	JAUHBU000000000	SAMN36031723	PA-18-25	Pseudomonas aeruginosa
GCA_036315785.1	JAUHBT000000000	SAMN36031724	PA-18-26	Pseudomonas aeruginosa
GCA_036315765.1	JAUHBS000000000	SAMN36031725	PA-18-27	Pseudomonas aeruginosa
GCA_036315745.1	JAUHBQ000000000	SAMN36031727	PA-18-29	Pseudomonas aeruginosa
GCA_036315725.1	JAUHBR000000000	SAMN36031726	PA-18-28	Pseudomonas aeruginosa
GCA_036315705.1	JAUHBP000000000	SAMN36031728	PA-18-30	Pseudomonas aeruginosa
GCA_036315685.1	JAUHBO000000000	SAMN36031729	PA-18-31	Pseudomonas aeruginosa
GCA_036315665.1	JAUHBN000000000	SAMN36031730	PA-18-32	Pseudomonas aeruginosa
GCA_036315645.1	JAUHBM000000000	SAMN36031731	PA-18-33	Pseudomonas aeruginosa
GCA_036315625.1	JAUHBJ000000000	SAMN36031735	PA-18-37	Pseudomonas aeruginosa
GCA_036315585.1	JAUHBK000000000	SAMN36031734	PA-18-36	Pseudomonas aeruginosa
GCA_036315605.1	JAUHBL000000000	SAMN36031733	PA-18-35	Pseudomonas aeruginosa
GCA_036315565.1	JAUHBH000000000	SAMN36031737	PA-18-39	Pseudomonas aeruginosa
GCA_036315545.1	JAUHBI000000000	SAMN36031736	PA-18-38	Pseudomonas aeruginosa
GCA_036315525.1	JAUHBG000000000	SAMN36031738	PA-18-40	Pseudomonas aeruginosa
GCA_036315505.1	JAUHBF000000000	SAMN36031739	PA-18-41	Pseudomonas aeruginosa
GCA_036315485.1	JAUHBE000000000	SAMN36031740	PA-18-42	Pseudomonas aeruginosa
GCA_036315465.1	JAUHBD000000000	SAMN36031741	PA-18-43	Pseudomonas aeruginosa
GCA_036315445.1	JAUHBC000000000	SAMN36031742	PA-18-44	Pseudomonas aeruginosa
GCA_036315425.1	JAUHBB000000000	SAMN36031743	PA-18-45	Pseudomonas aeruginosa
GCA_036315405.1	JAUHBA000000000	SAMN36031744	PA-18-46	Pseudomonas aeruginosa
GCA_036315385.1	JAUHAZ000000000	SAMN36031745	PA-18-47	Pseudomonas aeruginosa
GCA_036315365.1	JAUHAY000000000	SAMN36031747	PA-18-49	Pseudomonas aeruginosa
GCA_036315345.1	JAUHAW000000000	SAMN36031749	PA-18-51	Pseudomonas aeruginosa
GCA_036315325.1	JAUHAX000000000	SAMN36031748	PA-18-50	Pseudomonas aeruginosa
GCA_036315305.1	JAUHAV000000000	SAMN36031750	PA-18-52	Pseudomonas aeruginosa
GCA_036315285.1	JAUHAU000000000	SAMN36031751	PA-18-53	Pseudomonas aeruginosa
GCA_036315265.1	JAUHAT000000000	SAMN36031752	PA-18-54	Pseudomonas aeruginosa
GCA_036315245.1	JAUHAS000000000	SAMN36031753	PA-18-55	Pseudomonas aeruginosa
GCA_036315225.1	JAUHAP000000000	SAMN36031756	PA-18-58	Pseudomonas aeruginosa
GCA_036315205.1	JAUHAR000000000	SAMN36031754	PA-18-56	Pseudomonas aeruginosa
GCA_036315185.1	JAUHAQ000000000	SAMN36031755	PA-18-57	Pseudomonas aeruginosa
GCA_036315165.1	JAUHAN000000000	SAMN36031758	PA-18-60	Pseudomonas aeruginosa
GCA_036315145.1	JAUHAO000000000	SAMN36031757	PA-18-59	Pseudomonas aeruginosa
GCA_036315125.1	JAUHAM000000000	SAMN36031759	PA-18-61	Pseudomonas aeruginosa
GCA_036315095.1	JAUHAL000000000	SAMN36031760	PA-18-62	Pseudomonas aeruginosa
GCA_036315085.1	JAUHAK000000000	SAMN36031761	PA-18-63	Pseudomonas aeruginosa
GCA_036315065.1	JAUHAJ000000000	SAMN36031762	PA-18-64	Pseudomonas aeruginosa
GCA_036315045.1	JAUHAH000000000	SAMN36031764	PA-18-66	Pseudomonas aeruginosa
GCA_036315025.1	JAUHAI000000000	SAMN36031763	PA-18-65	Pseudomonas aeruginosa
GCA_036315005.1	JAUHAG000000000	SAMN36031765	PA-18-67	Pseudomonas aeruginosa
GCA_036314985.1	JAUHAC000000000	SAMN36031769	PA-18-71	Pseudomonas aeruginosa
GCA_036314965.1	JAUHAF000000000	SAMN36031766	PA-18-68	Pseudomonas aeruginosa
GCA_036314945.1	JAUHAB000000000	SAMN36031770	PA-18-72	Pseudomonas aeruginosa
GCA_036314925.1	JAUHAE000000000	SAMN36031767	PA-18-69	Pseudomonas aeruginosa
GCA_036314905.1	JAUHAD000000000	SAMN36031768	PA-18-70	Pseudomonas aeruginosa
GCA_036314865.1	JAUGZY000000000	SAMN36031773	PA-18-75	Pseudomonas aeruginosa
GCA_036314885.1	JAUHAA000000000	SAMN36031771	PA-18-73	Pseudomonas aeruginosa
GCA_036314845.1	JAUGZZ000000000	SAMN36031772	PA-18-74	Pseudomonas aeruginosa

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Population-based surveillance of Pseudomonas aeruginosa causing bloodstream infections

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