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1.

5' RACE (Rapid amplification of cDNA ends) and 3' RACE of U6 or U1-driven Cas13 CRISPR RNAs (crRNAs)

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
School of Biomedical Sciences, The University of Hong Kong
Accession:
PRJNA1150101
ID:
1150101

2.

The competition between splicing and 3′ processing shapes the human transcriptome

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Other
Scope:
Multiisolate
Shi, Microbiology & Molecular Genetics, UC Irvine
Accession:
PRJNA1149699
ID:
1149699

3.

Live-cell single-molecule dynamics of eukaryotic RNA polymerase machineries

Project data type: Raw sequence reads
Scope:
Multispecies
Johns Hopkins University
Accession:
PRJNA1124391
ID:
1124391

4.

A nuclear RNA degradation code for eukaryotic transcriptome surveillance

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Other
Scope:
Multiisolate
Shi, Microbiology & Molecular Genetics, UC Irvine
Accession:
PRJNA1113537
ID:
1113537

5.

Conserved role for spliceosomal component PRPF40A in microexon splicing

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Southern Methodist University
Accession:
PRJNA1110761
ID:
1110761

6.

The landscape of RNA-chromatin interaction reveals small non coding RNAs as essential mediators of leukemia maintenance [ChIRP]

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Other
Scope:
Multiisolate
Robert Bosch Center for Tumor Diseases
Accession:
PRJNA1109722
ID:
1109722

7.

RNA-sequencing data of HIV-1 latently infected monocytic cell line U1

Project data type: Raw sequence reads
Scope:
Multispecies
Jawaharlal Nehru University
Accession:
PRJNA1091867
ID:
1091867

8.

U4 inhibits premature cleavage and polyadenylation of pre-mRNAs [ChIP-seq]

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Epigenomics
Scope:
Multiisolate
school of medicine, sysu
Accession:
PRJNA1091630
ID:
1091630

9.

U4 inhibits premature cleavage and polyadenylation of pre-mRNAs [mRNA 3'-seq]

Project data type: Transcriptome or Gene expression
Scope:
Multispecies
school of medicine, sysu
Accession:
PRJNA1091628
ID:
1091628

10.

U4 inhibits premature cleavage and polyadenylation of pre-mRNAs [mRNA-seq]

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
school of medicine, sysu
Accession:
PRJNA1091620
ID:
1091620

11.

Mushroom Tyrosinases

Cloning of the six mushroom tyrosinases

Project data type: Transcriptome or Gene expression
Scope:
Monoisolate
UNIVERSITY OF VIENNA
Accession:
PRJEB47604
ID:
1084336

12.

Structural atlas of human primary microRNAs generated by SHAPE-MaP

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Other
Scope:
Multiisolate
Broad Institute
Accession:
PRJNA1070250
ID:
1070250

13.

Inhibition of RNA splicing triggers CHMP7 nuclear entry impacting TDP-43 function and leading to onset of ALS (RNA-Seq).

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Yeo, Health, UCSD
Accession:
PRJNA1069014
ID:
1069014

14.

Inhibition of RNA splicing triggers CHMP7 nuclear entry impacting TDP-43 function and leading to onset of ALS (eCLIP).

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Other
Scope:
Multiisolate
Yeo, Health, UCSD
Accession:
PRJNA1069013
ID:
1069013

15.

Selected humanization of yeast U1 snRNP leads to global suppression of pre-mRNA splicing and mitochondrial dysfunction in the budding yeast

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Biochemistry and Molecular Genetics, University of Colorado Anschutz Medical Campus
Accession:
PRJNA1060265
ID:
1060265

16.

The Arabidopsis U1 snRNP regulates mRNA 3’-end processing

Project data type: Other
Scope:
Monoisolate
Martin-Luther-University Halle-Wittenberg
Accession:
PRJEB65251
ID:
1019217

17.

Mus musculus

Mammalian muscle-specific isoform of GFPT1: Acquisition of splicing regulation in evolution and its roles in glucose metabolisms and neuromuscular junction

Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Monoisolate
Neurogenetics Graduate School of Medicine, Nagoya University
Accession:
PRJDB16565
ID:
1016156

18.

Homo sapiens

RNA sequencing of HCT116 samples processed with TREX

Taxonomy:
Homo sapiens (human)
Project data type: Raw sequence reads
Scope:
Monoisolate
Barts Cancer Institute
Accession:
PRJNA994065
ID:
994065

19.

mRNA splicing is modulated by intronic microRNAs

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Tel Aviv University
Accession:
PRJNA988817
ID:
988817

20.

Stress-induced splicing activation of immediate early genes by nuclear speckle reorganization [HLs]

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Heart Centre Göttingen
Accession:
PRJNA966200
ID:
966200

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