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Organizing biological data

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Select item 11549301.

a small molecule compound TD-H2-A against Staphylococcus aureus

: Project data type: Raw sequence reads

Scope:: Multispecies

The Second Affiliated Hospital of Nanjing Medical University

Accession:: PRJNA1154930
ID:: 1154930

Select item 11402602.

Effect of damaging mutations in LXRalpha on the liver transcriptome

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Metabolic Research Laboratories, University of Cambridge

Accession:: PRJNA1140260
ID:: 1140260

Select item 11318073.

Innate cells and STAT1-dependent signals orchestrate vaccine-induced protection against invasive Cryptococcus infection

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Rutgers-New Jersey Medical School

Accession:: PRJNA1131807
ID:: 1131807

Select item 11167484.

Molecular diversity and migration of GABAergic neurons in the developing ventral midbrain

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

University Medical Center Utrecht

Accession:: PRJNA1116748
ID:: 1116748

Select item 11080845.

Trichoderma hunua isolate:TD 16

Trichoderma hunua isolate:TD 16 Raw sequence reads

Taxonomy:: Trichoderma hunua

: Project data type: Raw sequence reads

Scope:: Monoisolate

ITM, University Gwalior

Accession:: PRJNA1108084
ID:: 1108084

Select item 10882556.

Mapping the Geographical Distribution of the Mucosa-Associated Gut Microbiome in GI-Symptomatic Children with Autism

: Project data type: Raw sequence reads

Scope:: Multispecies

Wake Forest University School of Medicine

Accession:: PRJNA1088255
ID:: 1088255

Select item 10847857.

Coactivator-independent vitamin D receptor signaling impairs intestinal calcium transport in mice, leading to severe rickets, which is not prevented by a diet high in calcium, phosphate, and lactose.

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

KU Leuven

Accession:: PRJNA1084785
ID:: 1084785

Select item 10655928.

Antimicrobial and Anti-biofilm Activity of A Thiazolidinone Derivative against Staphylococcus aureus in vitro and in vivo approach

: Project data type: Raw sequence reads

Scope:: Multispecies

Shanghai Centre for Clinical Liboratory

Accession:: PRJNA1065592
ID:: 1065592

Select item 10628319.

Heart transcriptional changes with prednisone with inducible cardiomyocyte-specific KLF15 ablation

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Cincinnati Children's Hospital Medical Center

Accession:: PRJNA1062831
ID:: 1062831

Select item 106278010.

Heart transcriptional changes with prednisone with inducible cardiomyocyte-specific GR ablation

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Cincinnati Children's Hospital Medical Center

Accession:: PRJNA1062780
ID:: 1062780

Select item 106182311.

Homo sapiens

Engineering TadA ortholog-derived cytosine base editor without motif preference and adenosine activity limitation

Taxonomy:: Homo sapiens (human)

: Project data type: Raw sequence reads

Scope:: Monoisolate

HuidaGene

Accession:: PRJNA1061823
ID:: 1061823

Select item 106124712.

Characterisation of ER-beta functions in prostate cancer (ATAC-Seq)

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Epigenomics

Scope:: Multiisolate

Cedars-Sinai Medical Center

Accession:: PRJNA1061247
ID:: 1061247

Select item 105029113.

Samd7 preserves cell identity and enforces the ‘one neuron-one receptor’ rule in vertebrate photoreceptors [5dpf_td]

Organism:: Danio rerio

Taxonomy:: Danio rerio (zebrafish)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Pathology and Immunology, Washington University School of Medicine

Accession:: PRJNA1050291
ID:: 1050291

Select item 103744414.

EMG produced TPA metagenomics assembly of PRJNA375455 data set (Marine microbial communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - Knorr_S15_td_AAIW_ad_750m_LV_A metagenome).

: Project data type: Other

Scope:: Monoisolate

EMG

Accession:: PRJEB68340
ID:: 1037444

Select item 103314515.

Eukaryota sp.

ZHfish

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

Jigsaw Genomes

Accession:: PRJNA1033145
ID:: 1033145

Select item 100980516.

Effect of Zbtb24-depletion on gene expressions during the activation of total splenic B cells

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Soochow University

Accession:: PRJNA1009805
ID:: 1009805

Select item 100980417.

Effect of Zbtb24-depletion on gene expressions during the activation of peritoneal B1 cells

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Soochow University

Accession:: PRJNA1009804
ID:: 1009804

Select item 99975018.

Single-cell and spatial transcriptomics uncovers the role of senescent vascular cells in pathological arterial remodeling during murine atherosclerosis

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

NIH/NCI

Accession:: PRJNA999750
ID:: 999750

Select item 98815119.

Homo sapiens

Introduction: Nutrition and gut microbiota play a fundamental role in human health and various conditions such as Autism Spectrum Disorder (ASD). Children with ASD may have a restrictive diet due to increased sensory sensitivity or adherence to a glu