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Organizing biological data

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Select item 11614931.

Retinoic acid and TGF-β orchestrate organ-specific programs of tissue-residency [dnRA_Antag]

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Microbiology and Immunology, The Peter Doherty Institute for Infection and Immunity

Accession:: PRJNA1161493
ID:: 1161493

Select item 11614912.

Retinoic acid and TGF-β orchestrate organ-specific programs of tissue-residency [dnRARa]

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Microbiology and Immunology, The Peter Doherty Institute for Infection and Immunity

Accession:: PRJNA1161491
ID:: 1161491

Select item 11608243.

Retinoic acid and TGF-β orchestrate organ-specific programs of tissue-residency

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Epigenomics

Scope:: Multiisolate

Memorial Sloan Kettering

Accession:: PRJNA1160824
ID:: 1160824

Select item 11347514.

HDAC1 restricts fungal-induced Th17 polarization to restrain tissue damage [Kidney RNA-seq]

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Medical University of Vienna

Accession:: PRJNA1134751
ID:: 1134751

Select item 10778005.

A commensal protozoan attenuates Clostridioides difficile pathogensis in mice through regulating the arginine-ornithine metabolic axis and the host intestinal immune response

: Project data type: Raw sequence reads

Scope:: Multispecies

Xuzhou Medical University

Accession:: PRJNA1077800
ID:: 1077800

Select item 10518066.

Activation, control and T-bet+ B cell-mediated immune surveillance of endogenous retroviruses

: Project data type: Raw sequence reads

Scope:: Multispecies

Philipps-Universitat Marburg

Accession:: PRJNA1051806
ID:: 1051806

Select item 9389187.

ITK Degradation to Block T-cell Receptor Signaling and Overcome Therapeutic Resistance in T-Cell Lymphomas

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Wenchao Wu lab, Sun Yat-sen University Cancer Center

Accession:: PRJNA938918
ID:: 938918

Select item 9076768.

Interference of B-Cell and T-Cell Receptor Genes in Single-Cell RNA Sequencing Data

: Project data type: Other

Scope:: Monoisolate

European Bioinformatics Institute

Accession:: PRJEB57175
ID:: 907676

Select item 8821829.

Spatial coupling of microbes and immune cells in solid malignancies.

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Medicine, University of Pennsylvania

Accession:: PRJNA882182
ID:: 882182

Select item 82138610.

A splitCas9 phenotypic screen in Toxoplasma gondii identifies proteins involved in host cell egress and invasion

: Project data type: Raw sequence reads

Scope:: Multispecies

LMU

Accession:: PRJNA821386
ID:: 821386

Select item 80695711.

Cytotoxic Granzyme C Expressing ILC1s Contribute to Antitumor Immunity and Neonatal Autoimmunity

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Other

Scope:: Multiisolate

Ming Li, Immunology Program, Sloan Kettering Institute

Accession:: PRJNA806957
ID:: 806957

Select item 78262912.

Overproduction of IFNg by Cbl-b deficient CD8+ T cells provides resistance against regulatory T cells and induce potent anti-tumor immunity

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Ohashi Lab, Princess Margaret Cancer Centre

Accession:: PRJNA782629
ID:: 782629

Select item 75216613.

Metastasis-entrained eosinophils enhance lymphocyte-1 mediated anti-tumor immunity

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Madi's Lab, Department of Pathology, Tel Aviv University

Accession:: PRJNA752166
ID:: 752166

Select item 74492614.

A novel model to study deficiency of RORγt+ Tregs reveals net suppressive function and dependency on the CCR6/CCL20 axis for expansion and activation

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

III. Department of Medicine, University clinic Hamburg-Eppendorf

Accession:: PRJNA744926
ID:: 744926

Select item 73367915.

Prenatal cadmium exposure alters proliferation in mouse CD4+ T cells via LncRNA Snhg7

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

2072A, HSC North, Floor 2, MicroBiology, Immunology, and Cell Biology, West Virginia University

Accession:: PRJNA733679
ID:: 733679

Select item 71885016.

Fever supports CD8+ effector T cell responses by promoting mitochondrial translation

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Immunometabolism, Johns Hopkins University

Accession:: PRJNA718850
ID:: 718850

Select item 69924217.

RNA Sequencing of Fetal and Adult Mature Thymic Vγ1+ γδ T-Cells

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Immunology, University of Toronto

Accession:: PRJNA699242
ID:: 699242

Select item 69857018.

Single-Cell RNA Sequencing of Thymic KN6 γδ T-Cells Modulated by TCR Signal Strength and Notch Signaling

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Immunology, University of Toronto

Accession:: PRJNA698570
ID:: 698570

Select item 64056119.

Microbiota composition of MS and PD patients

Supplementation of the short chain fatty acid, propionic acid restores regulatory T cell function in multiple sclerosis patients – a proof-of-concept study

: Project data type: Other

Scope:: Monoisolate

COPENHAGEN UNIVERSITY

Accession:: PRJEB22977
ID:: 640561

Select item 64056020.

Propionic acid as add-on in MS therapy

Supplementation of the short chain fatty acid, propionic acid restores regulatory T cell function in multiple sclerosis patients – a proof-of-concept study