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Select item 11746221.

Rapid, User-friendly, Cost-effective DNA and Library Preparation Methods for Whole-Genome Sequencing of Bacteria with Varying Cell Wall Composition and GC content Using Minimal DNA on the Illumina Platform

This study addresses the need for efficient, cost-effective, and rapid DNA and library preparation methods suitable for whole-genome sequencing (WGS) of bacteria, focusing on minimising DNA input (~1 ng) from a single colony.

: Project data type: Other

Scope:: Monoisolate

UCLouvain Institut de Recherche Experimentale et Clinique

Accession:: PRJEB81290
ID:: 1174622

Select item 11587332.

R populations' Pool-seq (rec-1 experimental evolution; GEV lab)

: Project data type: Raw sequence reads

Scope:: Multispecies

IBENS

Accession:: PRJNA1158733
ID:: 1158733

Select item 11302823.

Anti-inflammatory response to 1,8-Cineol is associated with colonic presence of Prevotella copri in Otitis media patients

: Project data type: Other

Scope:: Monoisolate

University of Luebeck

Accession:: PRJEB71624
ID:: 1130282

Select item 11290354.

Gene expression profiling of Huh7.5.1 with tunicamycin treatment and HCVcc infection

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Department of Microbiology and Immunology, Hamamatsu University School of Medicine

Accession:: PRJNA1129035
ID:: 1129035

Select item 11263055.

Gene expression in Achilles tendon cells of SD rats after 1 h of running followed by 12 h of rest

Organism:: Rattus norvegicus

Taxonomy:: Rattus norvegicus (Norway rat)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Department of Radiology, The Fifth Affiliated Hospital of Sun Yat-sen University, Zhuhai

Accession:: PRJNA1126305
ID:: 1126305

Select item 11225636.

Deletion of a state-specific PD-1 enhancer modulates exhausted T cell fate and function [RNA-Seq]

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Sharpe, Immunology, Harvard Medical School

Accession:: PRJNA1122563
ID:: 1122563

Select item 11069957.

Ascaphus truei isolate:aAscTru1

Ascaphus truei (tailed frog) genome, aAscTru1, haplotype 1

Organism:: Ascaphus truei

Taxonomy:: Ascaphus truei (tailed frog)

: Project data type: Genome sequencing

Scope:: Monoisolate

Vertebrate Genomes Project

Accession:: PRJNA1106995
ID:: 1106995

Select item 11004388.

m5C MeRIP sequencing in PANC-1 cells to map the m5C methylome of PANC-1 cells treated with CAF-derived Evs

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Epigenomics

Scope:: Multiisolate

Guangdong Provincial People’s Hospital

Accession:: PRJNA1100438
ID:: 1100438

Select item 10965579.

RNA sequencing of human nontransformed retinal pigment epithelia RPE-PPM1D-T2 cells carrying a truncating mutation in exon 6 of the PPM1D – CLONE 0 AND CLONE 1

: Project data type: Other

Scope:: Monoisolate

European Bioinformatics Institute

Accession:: PRJEB74065
ID:: 1096557

Select item 109342610.

Lack of TREM2 during anti-PD-1 therapy reprograms intestinal macrophages and microbiota to enhance tumor rejection

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Marco Colonna, Immunology&Pathology, Washington University in St. Louis

Accession:: PRJNA1093426
ID:: 1093426

Select item 108530811.

Characterization of human monocytic cell line THP-1 associated with human 3D skin models under UVA exposure

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

2015, Microbiology, Chulalongkorn University

Accession:: PRJNA1085308
ID:: 1085308

Select item 107972212.

The Splice Index as a prognostic biomarker of strength and function in myotonic dystrophy type 1

: Project data type: Raw sequence reads

Scope:: Multispecies

Virginia Commonwealth University

Accession:: PRJNA1079722
ID:: 1079722

Select item 107728213.

Divergent role of Mitochondrial Amidoxime Reducing Component 1 (MARC1) in human and mouse

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Regeneron Pharmaceuticals

Accession:: PRJNA1077282
ID:: 1077282

Select item 107216614.

Mergus octosetaceus isolate:bMerOct1

Mergus octosetaceus (Brazilian merganser) genome, bMerOct1, haplotype 1

Organism:: Mergus octosetaceus

Taxonomy:: Mergus octosetaceus (Brazilian merganser)

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

Vertebrate Genomes Project

Accession:: PRJNA1072166
ID:: 1072166

Select item 106946915.

Longitudinal scRNAseq profiling of memory B cells in mRNA vaccinated individuals post BA.1-breakthrough infection

: Project data type: Other

Scope:: Monoisolate

European Bioinformatics Institute

Accession:: PRJEB60435
ID:: 1069469

Select item 106441616.

Heterodontus francisci isolate:sHetFra1

Heterodontus francisci (horn shark) genome, sHetFra1, haplotype 1

Organism:: Heterodontus francisci

Taxonomy:: Heterodontus francisci (horn shark)

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

Vertebrate Genomes Project

Accession:: PRJNA1064416
ID:: 1064416

Select item 106313617.

RNA-seq of ATM-knockout human embryonic stem-cells (h-pES10) treated with the LATS1/2 inhibitor Lats-IN-1 (TRULI) for 24 h against untreated cells

: Project data type: Other

Scope:: Monoisolate

European Bioinformatics Institute

Accession:: PRJEB59889
ID:: 1063136

Select item 105992118.

Transcriptomic analysis of imatinib-resistant K562 cells with knocked down Pleomorphic Adenoma Gene 1 (PLAG1) to identify the targets

: Project data type: Other

Scope:: Monoisolate

European Bioinformatics Institute

Accession:: PRJEB53967
ID:: 1059921

Select item 105715819.

CAR affinity modulates the sensitivity of CAR-T cells to PD-1/PD-L1-mediated inhibition.

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Fundació de Recerca Clínic Barcelona-Institut d’Investigacions Biomèdiques August Pi i Sunyer (FRCB-IDIBAPS)

Accession:: PRJNA1057158
ID:: 1057158

Select item 105392120.

Ralstonia solanacearum strain ES5-1 genome sequencing

: Project data type: Raw sequence reads

Scope:: Multispecies

Huazhong Agricutural University

Accession:: PRJNA1053921
ID:: 1053921

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