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Organizing biological data

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The following terms were not found in BioProject: @jyp24, opnabla.

Select item 11503861.

transcriptome in Lutjanus erythropterus juveniles liver during transportation

: Project data type: Raw sequence reads

Scope:: Multispecies

South China Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences

Accession:: PRJNA1150386
ID:: 1150386

Select item 11231542.

Profiling IgG and IgA antibody responses during vaccination and infection in a population at high risk of gonorrhoea

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Proteome

Scope:: Multiisolate

JPD Lab, FBMH/SBS/EIGen, The University of Manchester

Accession:: PRJNA1123154
ID:: 1123154

Select item 10355063.

A recombination-resistant genome for live attenuated and stable PEDV vaccines by engineering the transcriptional regulatory sequences

Taxonomy:: Porcine epidemic diarrhea virus

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Shenzhen Nanshan People's Hospital and the 6th Affiliated Hospital of Shenzhen University Health Science Center, Department of Pain Medicine and Shenzhen Municipal Key Laboratory for Pain Medicine

Accession:: PRJNA1035506
ID:: 1035506

Select item 9857194.

Analysis of the accumulation of mutations in self-replicating RNAs using barcoded EGFP library

Organism:: Mesocricetus auratus

Taxonomy:: Mesocricetus auratus (golden hamster)

: Project data type: Other

Scope:: Multiisolate

Peking University

Accession:: PRJNA985719
ID:: 985719

Select item 9270455.

Characteristics of premanufacture CD8+T cells determine CAR-T efficacy in patients with diffuse large B-cell lymphoma

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Chinese general PLA hospital

Accession:: PRJNA927045
ID:: 927045

Select item 6575716.

A lncRNA HAR1B has a potential as a predictive marker for pazopanib therapy in patients with sarcoma

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Department of Clinical Oncology, Institute of Development, Aging and Cancer, Tohoku University

Accession:: PRJNA657571
ID:: 657571

Select item 6478617.

Rescue of SARS-CoV-2 from a single bacterial artificial chromosome

: Project data type: Raw sequence reads

Scope:: Multispecies

Texas Biomedical Research Institute

Accession:: PRJNA647861
ID:: 647861

Select item 6277188.

Increased processing of SINE B2 non coding RNAs unveils a novel type of transcriptome de-regulation underlying amyloid beta neuro-pathology

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Other

Scope:: Multiisolate

University of Lethbridge

Accession:: PRJNA627718
ID:: 627718

Select item 6142289.

Sea bream gut microbiota

EFFECTS OF DIETARY YEAST AUTOLYSATE ON INTESTINAL MICROBIAL COMMUNITIES OF SEA BREAM (Sparus aurata)

: Project data type: Other

Scope:: Monoisolate

Department of Biotechnology and Life Sciences (DBSV), University of Insubria

Accession:: PRJEB35410
ID:: 614228

Select item 60364910.

Bovine hepatic miRNAome profiling and differential miRNA expression analyses between beef steers with divergent feed efficiency phenotypes

Organism:: Bos taurus

Taxonomy:: Bos taurus (domestic cattle)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Agricultural, Food & Nutritional Science, University of Alberta

Accession:: PRJNA603649
ID:: 603649

Select item 57433211.

Arabidopsis thaliana mutants RNACapSeq study

Isolation and sequencing of the mRNAs/cDNAs from wild-type and selected mutant Arabidopsis lines for studying the roles of corresponding genes in ETI early response gene regulations.

: Project data type: Other

Scope:: Monoisolate

The John Innes Centre

Accession:: PRJEB34520
ID:: 574332

Select item 51634512.

Comparison of human skin- and nerve-derived Schwann cells reveals many similarities and subtle genomic and functional differences

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Biernaskie Lab, Comparative Biology and Experimental Medicine, University of Calgary

Accession:: PRJNA516345
ID:: 516345

Select item 49183013.

Studies in an early development window unveils a severe HSC defect in both murine and human Fanconi anemia [human]

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

genomic, U1016, INSERM

Accession:: PRJNA491830
ID:: 491830

Select item 49182914.

Studies in an early development window unveils a severe HSC defect in both murine and human Fanconi anemia [mouse]

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

genomic, U1016, INSERM

Accession:: PRJNA491829
ID:: 491829

Select item 41558015.

HNF1B controls epithelial organization and cell polarity during ureteric bud branching and collecting duct morphogenesis

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Molecular Signaling, Developmental Biology, IBPS- UMR7622 CNRS -UPMC

Accession:: PRJNA415580
ID:: 415580

Select item 31489716.

Mus musculus

REV-ERBα influences stability and nuclear localization of the glucocorticoid receptor

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

University of Fribourg

Accession:: PRJNA314897
ID:: 314897

Select item 27422017.

Homo sapiens

Induction of USP17 by combining BET and HDAC inhibitors in breast cancer cells.

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Department of Biosciences and Nutrition, Karolinska Institutet

Accession:: PRJNA274220
ID:: 274220

Select item 26175018.

Macaca mulatta

miRNA profiling of Macaca mulatta intact duodenum samples following chronic Delta9 Tetrahydrocannabinol (Δ9-THC) treatment to SIV infected rhesus macaques

Taxonomy:: Macaca mulatta (Rhesus monkey)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

215, Comparative Pathology, Tulane National Primate Research Center

Accession:: PRJNA261750
ID:: 261750

Select item 17485619.

Mus musculus

Novel biomarkers for distributed stem cells: asymmetric self-renewal associated (ASRA) genes identification by combined cDNA micro-array orthogonal intersection and sparse feature analysis

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

CSIRO

Accession:: PRJNA174856
ID:: 174856

Select item 17296220.

Mus musculus

Transcript atlases reveal that artery tertiary lymphoid organs but not secondary lymphoid organs control key steps of atherosclerosis T cell immunity in aged apoe-/- mice.