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Accession: PRJNA886482 ID: 886482

Plastisphere microbiome of Biodegradable Plastics on deep-sea floor

This project is focused on the metagenomic assemblies of plastisphere established at the deep seafloor ranging from 800-6000 m. More...

Accession	PRJNA886482
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	plastisphere metagenome[Taxonomy ID: 1342751] unclassified sequences; metagenomes; ecological metagenomes; plastisphere metagenome
Submission	Registration date: 21-Nov-2023 Japan Agency for Marine-Earth Science and technology (JAMSTEC)
Relevance	Environmental
Locus Tag Prefix	SMD17

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	17
SRA Experiments	66
Other datasets
BioSample	83
Assembly	17

Assembly details:

Assembly level

Number of Assemblies

Scaffold

Contig

14
3
17

Assembly	Level	WGS	BioSample	Isolate	Taxonomy
GCA_033851875.1		JAWSVN000000000	SAMN38046948	PJM02_PBAT_act1	Acidimicrobiales bacterium
GCA_033852175.1		JAWSUY000000000	SAMN38046933	BHT04_PHB_gam1	Agarilytica sp.
GCA_033852165.1		JAWSUZ000000000	SAMN38046934	AMN13_PHB_gam1	Agarilytica sp.
GCA_033851915.1		JAWSVM000000000	SAMN38046947	AMN13_PHB_alp1	Alphaproteobacteria bacterium
GCA_033852115.1		JAWSVE000000000	SAMN38046939	PJM02_PBSA_gam1	Cellvibrionaceae bacterium
GCA_033852215.1		JAWSUX000000000	SAMN38046932	BHT04_PHB_gam2	Colwellia sp.
GCA_033851995.1		JAWSVI000000000	SAMN38046943	PJM12_PCL_del1	Desulfobacteraceae bacterium
GCA_033852015.1		JAWSVH000000000	SAMN38046942	BHT14_PCL_del1	Desulfobacula sp.
GCA_033852035.1		JAWSVG000000000	SAMN38046941	BHT14_PBSA_del1	Desulfocapsaceae bacterium
GCA_033852075.1		JAWSVC000000000	SAMN38046937	PJM12_PHB_gam2	Gammaproteobacteria bacterium
GCA_033852155.1		JAWSVA000000000	SAMN38046935	BHT14_PHBH_gam1	Gammaproteobacteria bacterium
GCA_033852135.1		JAWSVB000000000	SAMN38046936	PJM12_PHB_gam1	Gammaproteobacteria bacterium
GCA_033852095.1		JAWSVD000000000	SAMN38046938	BHT04_PCL_gam1	Granulosicoccaceae bacterium
GCA_033851975.1		JAWSVJ000000000	SAMN38046944	BHT04_PCL_alp1	Hyphomonas sp.
GCA_033851955.1		JAWSVK000000000	SAMN38046945	BHT04_PBSA_alp1	Marinosulfonomonas sp.
GCA_033852045.1		JAWSVF000000000	SAMN38046940	BHT04_PCL_gam2	Pseudomonas sp.
GCA_033851935.1		JAWSVL000000000	SAMN38046946	BHT04_PBAT_alp2	Sulfitobacter sp.

SRA Data Details

Parameter	Value
Data volume, Gbases	574
Data volume, Tbytes	0.24

Supplemental Content

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Assembly
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Nucleotide
Related Nucleotide entry
SRA
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Taxonomy
Taxonomy Links
WGS master
Link to WGS master record(s)

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Plastisphere microbiome of Biodegradable Plastics on deep-sea floor
Plastisphere microbiome of Biodegradable Plastics on deep-sea floor
Plastisphere microbiome of Biodegradable Plastics on deep-sea floor

BioProject
PRJNA886482 (1)
BioProject
LOC114299033 [Camellia sinensis]
LOC114299033 [Camellia sinensis]
Gene ID:114299033

Gene

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