ID 524111 - BioProject

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Accession: PRJNA524111 ID: 524111

Novel genomic isolates of S.pyogenes and S.dysgalactiae subsp. equisimilis associated to necrotising fasciitis

Novel genomic isolates of S. pyogenes and S. dysgalactiae subsp. equisimilis associated to necrotising fasciitis (NSTI) obtained from several European hospitals.

Accession	PRJNA524111
Data Type	Genome sequencing and assembly
Scope	Multispecies
Submission	Registration date: 25-Feb-2019 Rostock University Medical Center
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	8002
WGS master	103
Protein Sequences	56696
Other datasets
BioSample	103
Assembly	103

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

103
103

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_009848215.1	WVGN00000000	SAMN13634199	INFECT2027_SDSE	Streptococcus dysgalactiae
GCA_009847535.1	WVGS00000000	SAMN13634610	INFECT6056_SDSE	Streptococcus dysgalactiae
GCA_009847965.1	WVHD00000000	SAMN13634599	INFECT5041_SDSE	Streptococcus dysgalactiae
GCA_009846995.1	WVHI00000000	SAMN13634594	INFECT5029_SDSE	Streptococcus dysgalactiae
GCA_009847065.1	WVGB00000000	SAMN13634211	INFECT2086_SDSE	Streptococcus dysgalactiae
GCA_009847485.1	WVGQ00000000	SAMN13634612	INFECT6065_SDSE	Streptococcus dysgalactiae
GCA_009847585.1	WVGX00000000	SAMN13634605	INFECT6037_SDSE	Streptococcus dysgalactiae
GCA_008121855.1	SJLT00000000	SAMN10996161	SDES5005	Streptococcus dysgalactiae
GCA_008121785.1	SJLP00000000	SAMN10996165	SDES6020	Streptococcus dysgalactiae
GCA_008121765.1	SJLQ00000000	SAMN10996164	SDES6017	Streptococcus dysgalactiae
GCA_008121795.1	SJLR00000000	SAMN10996163	SDES6007	Streptococcus dysgalactiae
GCA_008121775.1	SJLS00000000	SAMN10996162	SDES6006	Streptococcus dysgalactiae
GCA_009848275.1	WVGT00000000	SAMN13634609	INFECT6047_SEZ	Streptococcus equi subsp. zooepidemicus
GCA_006364895.1	VCID00000000	SAMN10996185	SPY6028	Streptococcus pyogenes
GCA_006364945.1	VCIF00000000	SAMN10996177	SPY5448	Streptococcus pyogenes
GCA_006364905.1	VCIE00000000	SAMN10996178	SPY5626	Streptococcus pyogenes
GCA_006364865.1	VCIB00000000	SAMN10996189	SPY8157	Streptococcus pyogenes
GCA_006364855.1	VCIC00000000	SAMN10996188	SPY8003	Streptococcus pyogenes
GCA_011317345.1	WUCJ00000000	SAMN13671699	INFECT2056_SPY	Streptococcus pyogenes
GCA_011317275.1	WUCI00000000	SAMN13671700	INFECT3037_SPY	Streptococcus pyogenes
GCA_011317265.1	WUCH00000000	SAMN13671701	INFECT5010_SPY	Streptococcus pyogenes
GCA_011317245.1	WUCG00000000	SAMN13671702	INFECT5012_SPY	Streptococcus pyogenes
GCA_011317225.1	WUCF00000000	SAMN13671703	INFECT6057_SPY	Streptococcus pyogenes
GCA_009847565.1	WVGZ00000000	SAMN13634603	INFECT6029_SPY	Streptococcus pyogenes
GCA_009847455.1	WVGL00000000	SAMN13634201	INFECT2060_SPY	Streptococcus pyogenes
GCA_009847505.1	WVGV00000000	SAMN13634607	INFECT6045_SPY	Streptococcus pyogenes
GCA_009847475.1	WVGK00000000	SAMN13634202	INFECT2068_SPY	Streptococcus pyogenes
GCA_009847445.1	WVGJ00000000	SAMN13634203	INFECT2072_SPY	Streptococcus pyogenes
GCA_009847425.1	WVFV00000000	SAMN13634217	INFECT2131_SPY	Streptococcus pyogenes
GCA_009847385.1	WVGH00000000	SAMN13634205	INFECT2075_SPY	Streptococcus pyogenes
GCA_009847355.1	WVFT00000000	SAMN13634219	INFECT2134_SPY	Streptococcus pyogenes
GCA_009847375.1	WVGA00000000	SAMN13634212	INFECT2092_SPY	Streptococcus pyogenes
GCA_009847345.1	WVFU00000000	SAMN13634218	INFECT2132_SPY	Streptococcus pyogenes
GCA_009847315.1	WVFP00000000	SAMN13634223	INFECT2175_SPY	Streptococcus pyogenes
GCA_009847295.1	WVFO00000000	SAMN13634224	INFECT3008_SPY	Streptococcus pyogenes
GCA_009847285.1	WVFR00000000	SAMN13634221	INFECT2154_SPY	Streptococcus pyogenes
GCA_009847185.1	WVFG00000000	SAMN13634232	INFECT3033_SPY	Streptococcus pyogenes
GCA_009847245.1	WVFQ00000000	SAMN13634222	INFECT2174_SPY	Streptococcus pyogenes
GCA_009847225.1	WVFS00000000	SAMN13634220	INFECT2146_SPY	Streptococcus pyogenes
GCA_009847215.1	WVFN00000000	SAMN13634225	INFECT3009_SPY	Streptococcus pyogenes
GCA_009847195.1	WVFH00000000	SAMN13634231	INFECT3032_SPY	Streptococcus pyogenes
GCA_009847115.1	WVFI00000000	SAMN13634230	INFECT3021_SPY	Streptococcus pyogenes
GCA_009847095.1	WVFE00000000	SAMN13634234	INFECT3043_SPY	Streptococcus pyogenes
GCA_009847125.1	WVFF00000000	SAMN13634233	INFECT3041_SPY	Streptococcus pyogenes
GCA_009847645.1	WVEY00000000	SAMN13634240	INFECT4009_SPY	Streptococcus pyogenes
GCA_009847615.1	WVGY00000000	SAMN13634604	INFECT6034_SPY	Streptococcus pyogenes
GCA_009847555.1	WVGW00000000	SAMN13634606	INFECT6039_SPY	Streptococcus pyogenes
GCA_009847515.1	WVGP00000000	SAMN13634197	INFECT2001_SPY	Streptococcus pyogenes
GCA_009847085.1	WVGD00000000	SAMN13634209	INFECT2084_SPY	Streptococcus pyogenes
GCA_009847025.1	WVHJ00000000	SAMN13634593	INFECT5024_SPY	Streptococcus pyogenes
GCA_009848245.1	WVGR00000000	SAMN13634611	INFECT6058_SPY	Streptococcus pyogenes
GCA_009847055.1	WVFD00000000	SAMN13634235	INFECT3046_SPY	Streptococcus pyogenes
GCA_009846945.1	WVHC00000000	SAMN13634600	INFECT5042_SPY	Streptococcus pyogenes
GCA_009846965.1	WVHB00000000	SAMN13634601	INFECT5045_SPY	Streptococcus pyogenes
GCA_009846955.1	WVHA00000000	SAMN13634602	INFECT5048_SPY	Streptococcus pyogenes
GCA_009846925.1	WVHH00000000	SAMN13634595	INFECT5031_SPY	Streptococcus pyogenes
GCA_009848195.1	WVGM00000000	SAMN13634200	INFECT2058_SPY	Streptococcus pyogenes
GCA_009848235.1	WVGU00000000	SAMN13634608	INFECT6046_SPY	Streptococcus pyogenes
GCA_009848175.1	WVFZ00000000	SAMN13634213	INFECT2094_SPY	Streptococcus pyogenes
GCA_009848135.1	WVFY00000000	SAMN13634214	INFECT2096_SPY	Streptococcus pyogenes
GCA_009848075.1	WVEW00000000	SAMN13634242	INFECT5013_SPY	Streptococcus pyogenes
GCA_009847735.1	WVFA00000000	SAMN13634238	INFECT3061_SPY	Streptococcus pyogenes
GCA_009847715.1	WVFB00000000	SAMN13634237	INFECT3057_SPY	Streptococcus pyogenes
GCA_009847685.1	WVEZ00000000	SAMN13634239	INFECT4008_SPY	Streptococcus pyogenes
GCA_009848225.1	WVGO00000000	SAMN13634198	INFECT2002_SPY	Streptococcus pyogenes
GCA_009848035.1	WVEV00000000	SAMN13634243	INFECT5014_SPY	Streptococcus pyogenes
GCA_009848015.1	WVEU00000000	SAMN13634244	INFECT5020_SPY	Streptococcus pyogenes
GCA_009848105.1	WVFX00000000	SAMN13634215	INFECT2106_SPY	Streptococcus pyogenes
GCA_009848085.1	WVFW00000000	SAMN13634216	INFECT2118_SPY	Streptococcus pyogenes
GCA_009847925.1	WVFM00000000	SAMN13634226	INFECT3010_SPY	Streptococcus pyogenes
GCA_009848045.1	WVEX00000000	SAMN13634241	INFECT5011_SPY	Streptococcus pyogenes
GCA_009847905.1	WVHG00000000	SAMN13634596	INFECT5032_SPY	Streptococcus pyogenes
GCA_009847995.1	WVET00000000	SAMN13634245	INFECT5022_SPY	Streptococcus pyogenes
GCA_009847855.1	WVGG00000000	SAMN13634206	INFECT2076_SPY	Streptococcus pyogenes
GCA_009847955.1	WVHF00000000	SAMN13634597	INFECT5033_SPY	Streptococcus pyogenes
GCA_009847935.1	WVHE00000000	SAMN13634598	INFECT5034_SPY	Streptococcus pyogenes
GCA_009847865.1	WVFK00000000	SAMN13634228	INFECT3017_SPY	Streptococcus pyogenes
GCA_009847875.1	WVGF00000000	SAMN13634207	INFECT2077_SPY	Streptococcus pyogenes
GCA_009847785.1	WVGI00000000	SAMN13634204	INFECT2073_SPY	Streptococcus pyogenes
GCA_009847775.1	WVFC00000000	SAMN13634236	INFECT3054_SPY	Streptococcus pyogenes
GCA_009847815.1	WVFJ00000000	SAMN13634229	INFECT3019_SPY	Streptococcus pyogenes
GCA_009847805.1	WVFL00000000	SAMN13634227	INFECT3016_SPY	Streptococcus pyogenes
GCA_009847675.1	WVGE00000000	SAMN13634208	INFECT2080_SPY	Streptococcus pyogenes
GCA_009847665.1	WVGC00000000	SAMN13634210	INFECT2085_SPY	Streptococcus pyogenes
GCA_008121715.1	SJLL00000000	SAMN10996169	SPY2028	Streptococcus pyogenes
GCA_008121695.1	SJLK00000000	SAMN10996170	SPY3005	Streptococcus pyogenes
GCA_008121685.1	SJLJ00000000	SAMN10996171	SPY3012	Streptococcus pyogenes
GCA_008121625.1	SJLI00000000	SAMN10996172	SPY5003	Streptococcus pyogenes
GCA_008121705.1	SJLM00000000	SAMN10996168	SPY2017	Streptococcus pyogenes
GCA_008121655.1	SJKX00000000	SAMN10996186	SPY6033	Streptococcus pyogenes
GCA_008121615.1	SJLD00000000	SAMN10996179	SPY6004	Streptococcus pyogenes
GCA_008121605.1	SJKW00000000	SAMN10996187	SPY6040	Streptococcus pyogenes
GCA_008121595.1	SJLH00000000	SAMN10996173	SPY5004	Streptococcus pyogenes
GCA_008122125.1	SJLN00000000	SAMN10996167	SPY2015	Streptococcus pyogenes
GCA_008122095.1	SJLO00000000	SAMN10996166	SPY2006	Streptococcus pyogenes
GCA_008122065.1	SJLE00000000	SAMN10996176	SPY5006C	Streptococcus pyogenes
GCA_008122075.1	SJLG00000000	SAMN10996174	SPY5006A	Streptococcus pyogenes
GCA_008122055.1	SJLF00000000	SAMN10996175	SPY5006B	Streptococcus pyogenes
GCA_008121985.1	SJLB00000000	SAMN10996181	SPY6016	Streptococcus pyogenes
GCA_008122015.1	SJLA00000000	SAMN10996182	SPY6018	Streptococcus pyogenes
GCA_008121975.1	SJLC00000000	SAMN10996180	SPY6013	Streptococcus pyogenes
GCA_008121965.1	SJKY00000000	SAMN10996184	SPY6026	Streptococcus pyogenes
GCA_008121955.1	SJKZ00000000	SAMN10996183	SPY6025	Streptococcus pyogenes

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Novel genomic isolates of S.pyogenes and S.dysgalactiae subsp. equisimilis associated to necrotising fasciitis

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