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Accession: PRJNA512070 ID: 512070

Pseudoliparis sp. Yap Trench

Pseudoliparis sp. Yap Trench Genome sequencing and assembly

As a good example for studies on hadal adaptation, yap trench snailfish (Pseudoliparis yapensis) lives at a ~7,000-m depth of Yap Trench, western Pacific. More...
AccessionPRJNA512070
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismPseudoliparis sp. Yap Trench[Taxonomy ID: 2499240]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Cottales; Liparidae; Pseudoliparis; Pseudoliparis sp. Yap Trench
PublicationsMu Y et al., "Whole genome sequencing of a snailfish from the Yap Trench (~7,000 m) clarifies the molecular mechanisms underlying adaptation to the deep sea.", PLoS Genet, 2021 May;17(5):e1009530
SubmissionRegistration date: 8-Mar-2019
BGI-SZ
Locus Tag PrefixEMA06
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)1
SRA Experiments26
Publications
PubMed1
PMC1
Other datasets
BioSample1
Assembly1
SRA Data Details
ParameterValue
Data volume, Gbases207
Data volume, Mbytes62327

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