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Accession: PRJNA510104 ID: 510104

Marine sediment metagenome

Marine sediment metagenome Metagenome

Metagenomic analysis of DNA-degrading microbial populations in marine sediments of the Baffin Bay, Greenland.

Accession	PRJNA510104
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	marine sediment metagenome[Taxonomy ID: 412755] unclassified sequences; metagenomes; ecological metagenomes; marine sediment metagenome
Submission	Registration date: 15-Feb-2019 University of Vienna
Relevance	Environmental
Locus Tag Prefix	QZT11

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	2950
WGS master	16
SRA Experiments	274
Other datasets
BioSample	291
Assembly	16

Assembly details:

Assembly level

Number of Assemblies

Scaffold

Contig

4
12
16

Assembly	Level	WGS	BioSample	Isolate	Taxonomy
GCA_004195325.1		SDWO00000000	SAMN10805732	MAG-BB-5	Candidatus Izemoplasma acidinucleici
GCA_012974305.1		JAAXQN000000000	SAMN12272029	MAG-BB-18	Candidatus Methylomirabilis sp.
GCA_004195345.1		SDWM00000000	SAMN10805733	MAG-BB-3	Clostridiales bacterium MAG-BB-3
GCA_012974385.1		JAAXQJ000000000	SAMN12272025	MAG-BB-13	Colwellia sp.
GCA_012974295.1		JAAXQM000000000	SAMN12272028	MAG-BB-17	Dehalococcoidales bacterium
GCA_012974325.1		JAAXQL000000000	SAMN12272027	MAG-BB-15	Deltaproteobacteria bacterium
GCA_012974315.1		JAAXQI000000000	SAMN12272024	MAG-BB-11	Desulfobacterales bacterium
GCA_012974475.1		JAAXQD000000000	SAMN12272019	MAG-BB-01-B	Desulfobacterales bacterium
GCA_012974445.1		JAAXQG000000000	SAMN12272022	MAG-BB-08	Desulfuromonadales bacterium
GCA_012974435.1		JAAXQF000000000	SAMN12272021	MAG-BB-04-B	Desulfuromonadales bacterium
GCA_012974425.1		JAAXQE000000000	SAMN12272020	MAG-BB-03-B	Geopsychrobacter sp.
GCA_004195315.1		SDWL00000000	SAMN10805734	MAG-BB-2	Lutibacter sp.
GCA_012974265.1		JAAXQK000000000	SAMN12272026	MAG-BB-14	Motiliproteus sp.
GCA_004195305.1		SDWN00000000	SAMN10805736	MAG-BB-4	Neptunomonas sp.
GCA_004195335.1		SDWK00000000	SAMN10805735	MAG-BB-1	Shewanella sp.
GCA_012974415.1		JAAXQH000000000	SAMN12272023	MAG-BB-10	Syntrophobacteraceae bacterium

SRA Data Details

Parameter	Value
Data volume, Gbases	66
Data volume, Mbytes	27342

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WGS master
Link to WGS master record(s)

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PRJNA510104 (1)
BioProject
Marine sediment metagenome
Marine sediment metagenome
Marine sediment metagenome Metagenome

BioProject
Homo sapiens doublecortin like kinase 3 (DCLK3), transcript variant 1, mRNA
Homo sapiens doublecortin like kinase 3 (DCLK3), transcript variant 1, mRNA
gi|2030823529|ref|NM_001394672.2|

Nucleotide
Gene neighbors for Gene (Select 474344) (8)
Gene

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