See
Genome Information for Mammarenavirus lassaense
Lassa virus genomic sequencing and assembly from febrile patients in Nigeria and Sierra Leone.
| Accession | PRJNA436552 |
| Data Type | Genome sequencing |
| Scope | Multiisolate |
| Organism | Mammarenavirus lassaense[Taxonomy ID: 3052310] Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Arenaviridae; Mammarenavirus; Mammarenavirus lassaense |
| Publications | Siddle KJ et al., "Genomic Analysis of Lassa Virus during an Increase in Cases in Nigeria in 2018.", N Engl J Med, 2018 Nov 1;379(18):1745-1753 |
| Grants | - "Elucidating Genetic Determinants of Resistance to Lassa Hemorrhagic Fever" (Grant ID R01 AI114855, National Institute of Allergy and Infectious Diseases Extramural Activities)
- "Genomic Center for Infectious Disease" (Grant ID U19 AI110818, National Institute of Allergy and Infectious Diseases Extramural Activities)
- "Host and Microbial Genetic Determinants of Febrile Illness in West Africa" (Grant ID U01 HG007480, National Human Genome Research Institute)
- "Genomic Characterization and Surveillance of Microbial Threats in West Africa" (Grant ID U54 HG007480, National Human Genome Research Institute)
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| Submission | Registration date: 1-Mar-2018
Broad Institute of Harvard and MIT |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 446 |
| Genomic DNA | 1 |
| Genomic RNA | 445 |
| SRA Experiments | 258 |
| Protein Sequences | 844 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 567 |