Pseudomonas aeruginosa (ID 253624) - BioProject

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Accession: PRJNA253624 ID: 253624

Pseudomonas aeruginosa

Pseudomonas aeruginosa Genome sequencing and assembly

See Genome Information for Pseudomonas aeruginosa

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2152 additional projects are related by organism.

29 Pseudomonas aeruginosa clinical isolates for GWAS study

Accession	PRJNA253624
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Pseudomonas aeruginosa[Taxonomy ID: 287] Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Publications	Yan J et al., "Bow-tie signaling in c-di-GMP: Machine learning in a simple biochemical network.", PLoS Comput Biol, 2017 Aug;13(8):e1005677
Submission	Registration date: 26-Oct-2017 MSKCC
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	70
WGS master	9
Genomic DNA	19
SRA Experiments	33
Protein Sequences	171425
Publications
PubMed	1
PMC	1
Other datasets
BioSample	32
Assembly	28

Assembly details:

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Assembly level

Number of Assemblies

Complete genome

Contig

Total

19
9
28

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_002724095.1	JPEA00000000		SAMN02887035	X9820	Pseudomonas aeruginosa
GCA_002927095.1	JPFA00000000		SAMN02887042	M74707	Pseudomonas aeruginosa
GCA_002927035.1	JPFE00000000		SAMN02887038	W25637	Pseudomonas aeruginosa
GCA_002927235.1	JPEY00000000		SAMN02887045	M55212	Pseudomonas aeruginosa
GCA_002927215.1	JPFF00000000		SAMN02887037	W70322	Pseudomonas aeruginosa
GCA_002927195.1	JPFB00000000		SAMN02887041	RM1	Pseudomonas aeruginosa
GCA_002927165.1	JPFC00000000		SAMN02887039	T36994	Pseudomonas aeruginosa
GCA_002927155.1	JPFD00000000		SAMN02887040	T6313	Pseudomonas aeruginosa
GCA_002927135.1	JPFG00000000		SAMN02887036	W91453	Pseudomonas aeruginosa
GCA_002946935.1		1	SAMN02887043	F5677	Pseudomonas aeruginosa
GCA_001594325.2		1	SAMN02894356	F63912	Pseudomonas aeruginosa
GCA_001542795.2		1	SAMN02894342	X78812	Pseudomonas aeruginosa
GCA_001516365.2		1	SAMN02894352	M1608	Pseudomonas aeruginosa
GCA_001516325.2		1	SAMN02894354	H27930	Pseudomonas aeruginosa
GCA_001516225.2		1	SAMN02894343	W60856	Pseudomonas aeruginosa
GCA_001516205.2		1	SAMN02894344	W45909	Pseudomonas aeruginosa
GCA_001516185.2		1	SAMN02894345	W36662	Pseudomonas aeruginosa
GCA_001516165.2		1	SAMN02894346	W16407	Pseudomonas aeruginosa
GCA_001515915.2		1	SAMN02894349	T38079	Pseudomonas aeruginosa
GCA_001515845.2		1	SAMN02894350	S86968	Pseudomonas aeruginosa
GCA_001516305.2		1	SAMN02894355	H5708	Pseudomonas aeruginosa
GCA_001516245.2		1	SAMN02894358	F23197	Pseudomonas aeruginosa
GCA_001516265.1		1	SAMN02894357	F30658	Pseudomonas aeruginosa
GCA_001516105.1		1	SAMN02894347	T63266	Pseudomonas aeruginosa
GCA_001516005.1		1	SAMN02894348	T52373	Pseudomonas aeruginosa
GCA_001516385.1		1	SAMN02894351	M37351	Pseudomonas aeruginosa
GCA_001516345.1		1	SAMN02894353	H47921	Pseudomonas aeruginosa
GCA_001542835.1		1	SAMN02894359	F9670	Pseudomonas aeruginosa

SRA Data Details

Parameter	Value
Data volume, Gbases	153
Data volume, Mbytes	63948

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Pseudomonas aeruginosa

Pseudomonas aeruginosa Genome sequencing and assembly

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