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Accession: PRJNA1069023 ID: 1069023

Seed-borne bacteria in Maize

Seed-borne bacteria in Maize Genome sequencing and assembly

Bacterial raw-date from the seed-borne microbiome of "Santa Helena 5050" and "Sol da Manha" maize varieties

Accession	PRJNA1069023
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	plant metagenome[Taxonomy ID: 1297885] unclassified sequences; metagenomes; organismal metagenomes; plant metagenome
Submission	Registration date: 9-Apr-2024 Universidade Estadual do Norte Fluminense
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	18
SRA Experiments	7
Other datasets
BioSample	25
Assembly	18

Assembly details:

Assembly level

Number of Assemblies

Scaffold

18
18

Assembly	Level	WGS	BioSample	Isolate	Taxonomy
GCA_038040165.1		JAZKKC000000000	SAMN39746998	SH1_2	Burkholderia cenocepacia
GCA_038040065.1		JAZKKE000000000	SAMN39747000	SH2_1	Burkholderia cenocepacia
GCA_038040085.1		JAZKKG000000000	SAMN39747002	SH3_1	Burkholderia cenocepacia
GCA_038039965.1		JAZKKK000000000	SAMN39747006	SOL1_7	Burkholderia gladioli
GCA_038040145.1		JAZKKD000000000	SAMN39746999	SH1_3	Burkholderia gladioli
GCA_038040095.1		JAZKKH000000000	SAMN39747003	SH3_3	Burkholderia gladioli
GCA_038040075.1		JAZKKF000000000	SAMN39747001	SH2_2	Burkholderia gladioli
GCA_038039925.1		JAZKKP000000000	SAMN39747011	SOL2_4	Burkholderia gladioli
GCA_038039785.1		JAZKKT000000000	SAMN39747015	SOL3_ 8	Burkholderia gladioli
GCA_038039995.1		JAZKKN000000000	SAMN39747009	SOL1_11	Burkholderia sp.
GCA_038039985.1		JAZKKJ000000000	SAMN39747005	SOL1_2	Curtobacterium sp.
GCA_038039845.1		JAZKKR000000000	SAMN39747013	SOL3_4	Curtobacterium sp.
GCA_038039955.1		JAZKKL000000000	SAMN39747007	SOL1_9	Pantoea dispersa
GCA_038039885.1		JAZKKO000000000	SAMN39747010	SOL2_3	Pantoea dispersa
GCA_038039865.1		JAZKKQ000000000	SAMN39747012	SOL3_3	Pantoea dispersa
GCA_038039875.1		JAZKKS000000000	SAMN39747014	SOL3_6	Paraburkholderia tropica
GCA_038039945.1		JAZKKM000000000	SAMN39747008	SOL1_10	Paraburkholderia tropica
GCA_038040045.1		JAZKKI000000000	SAMN39747004	SOL1_1	Terriglobus sp.

SRA Data Details

Parameter	Value
Data volume, Gbases	27
Data volume, Mbytes	9468

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Nucleotide
Related Nucleotide entry
SRA
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Taxonomy
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WGS master
Link to WGS master record(s)

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Seed-borne bacteria in Maize
Seed-borne bacteria in Maize
Seed-borne bacteria in Maize Genome sequencing and assembly

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