Enterobacteriaceae (ID 787361) - BioProject

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Accession: PRJNA787361 ID: 787361

Enterobacteriaceae

Bacteria Genome sequencing and assembly

Whole genome sequencing identified common MCR-1 positive E. coli and K. pneumoniae in patients, providing direct evidence of colistin resistant Enterobacteriaceae prevalence and transmission.

Accession	PRJNA787361
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Enterobacteriaceae[Taxonomy ID: 543] Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae
Publications	Zhao Q et al., "Clinical Impact of Colistin Banning in Food Animal on mcr-1-Positive Enterobacteriaceae in Patients From Beijing, China, 2009-2019: A Long-Term Longitudinal Observational Study.", Front Microbiol, 2022;13:826624
Submission	Registration date: 12-Sep-2022 China Agricultural University

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	178
Publications
PubMed	1
PMC	1
Other datasets
BioSample	178
Assembly	178

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

169
9
178

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_025157675.1	JAJREI000000000	SAMN24061040	MCR003	Acinetobacter baumannii
GCA_025157655.1	JAJRGJ000000000	SAMN24061042	MCR016	Escherichia coli
GCA_025157635.1	JAJRGK000000000	SAMN24061041	MCR015	Escherichia coli
GCA_025157605.1	JAJRGH000000000	SAMN24061044	MCR021	Escherichia coli
GCA_025157595.1	JAJRGI000000000	SAMN24061043	MCR020	Escherichia coli
GCA_025157575.1	JAJRGG000000000	SAMN24061045	MCR022	Escherichia coli
GCA_025157555.1	JAJRGE000000000	SAMN24061047	MCR027	Escherichia coli
GCA_025157535.1	JAJRGF000000000	SAMN24061046	MCR024	Escherichia coli
GCA_025157515.1	JAJRGD000000000	SAMN24061049	MCR029	Escherichia coli
GCA_025157475.1	JAJRFR000000000	SAMN24061048	MCR028	Escherichia coli
GCA_025157485.1	JAJRGC000000000	SAMN24061050	MCR067	Escherichia coli
GCA_025157455.1	JAJRFZ000000000	SAMN24061053	MCR123	Escherichia coli
GCA_025157435.1	JAJRGB000000000	SAMN24061051	MCR082	Escherichia coli
GCA_025157415.1	JAJRGA000000000	SAMN24061052	MCR104	Escherichia coli
GCA_025157395.1	JAJRFY000000000	SAMN24061054	MCR132	Escherichia coli
GCA_025157375.1	JAJRFX000000000	SAMN24061055	MCR201	Escherichia coli
GCA_025157345.1	JAJRFW000000000	SAMN24061056	MCR206	Escherichia coli
GCA_025157335.1	JAJRFU000000000	SAMN24061058	MCR212	Escherichia coli
GCA_025157315.1	JAJRFV000000000	SAMN24061057	MCR209	Escherichia coli
GCA_025157295.1	JAJRFT000000000	SAMN24061059	MCR219	Escherichia coli
GCA_025157275.1	JAJRFS000000000	SAMN24061060	MCR229	Escherichia coli
GCA_025157255.1	JAJRFQ000000000	SAMN24061061	MCR233	Escherichia coli
GCA_025157235.1	JAJRFN000000000	SAMN24046364	MCR213	Escherichia coli
GCA_025157215.1	JAJRFM000000000	SAMN24046365	MCR214	Escherichia coli
GCA_025157195.1	JAJRFK000000000	SAMN24046367	MCR216	Escherichia coli
GCA_025157175.1	JAJRFL000000000	SAMN24046366	MCR215	Escherichia coli
GCA_025157155.1	JAJRFJ000000000	SAMN24046368	MCR217	Escherichia coli
GCA_025157135.1	JAJRFI000000000	SAMN24046369	MCR220	Escherichia coli
GCA_025157105.1	JAJRFF000000000	SAMN24046372	MCR223	Escherichia coli
GCA_025157095.1	JAJRFH000000000	SAMN24046370	MCR221	Escherichia coli
GCA_025157075.1	JAJRFG000000000	SAMN24046371	MCR222	Escherichia coli
GCA_025157055.1	JAJRFE000000000	SAMN24046373	MCR224	Escherichia coli
GCA_025157035.1	JAJRFD000000000	SAMN24046374	MCR225	Escherichia coli
GCA_025157015.1	JAJRFC000000000	SAMN24046375	MCR226	Escherichia coli
GCA_025156995.1	JAJRFB000000000	SAMN24046376	MCR227	Escherichia coli
GCA_025156975.1	JAJREZ000000000	SAMN24046378	MCR230	Escherichia coli
GCA_025156955.1	JAJRFA000000000	SAMN24046377	MCR228	Escherichia coli
GCA_025156935.1	JAJREY000000000	SAMN24046379	MCR231	Escherichia coli
GCA_025156915.1	JAJREX000000000	SAMN24046380	MCR232	Escherichia coli
GCA_025156885.1	JAJREW000000000	SAMN24046381	MCR234	Escherichia coli
GCA_025156875.1	JAJREU000000000	SAMN24046383	MCR236	Escherichia coli
GCA_025156855.1	JAJREV000000000	SAMN24046382	MCR235	Escherichia coli
GCA_025156825.1	JAJRET000000000	SAMN24046384	MCR237	Escherichia coli
GCA_025156815.1	JAJRES000000000	SAMN24046385	MCR238	Escherichia coli
GCA_025156795.1	JAJRER000000000	SAMN24046386	MCR239	Escherichia coli
GCA_025156765.1	JAJREP000000000	SAMN24046388	MCR242	Escherichia coli
GCA_025156755.1	JAJREQ000000000	SAMN24046387	MCR241	Escherichia coli
GCA_025156735.1	JAJREN000000000	SAMN24046390	MCR244	Escherichia coli
GCA_025156715.1	JAJREO000000000	SAMN24046389	MCR243	Escherichia coli
GCA_025156535.1	JAJQZM000000000	SAMN24044983	MCR101	Escherichia coli
GCA_025156505.1	JAJQZK000000000	SAMN24044985	MCR103	Escherichia coli
GCA_025156495.1	JAJQZL000000000	SAMN24044984	MCR102	Escherichia coli
GCA_025156465.1	JAJQZJ000000000	SAMN24044986	MCR106	Escherichia coli
GCA_025156455.1	JAJQZG000000000	SAMN24044989	MCR119	Escherichia coli
GCA_025156435.1	JAJQZI000000000	SAMN24044987	MCR115	Escherichia coli
GCA_025156415.1	JAJQZH000000000	SAMN24044988	MCR116	Escherichia coli
GCA_025156385.1	JAJQZD000000000	SAMN24044992	MCR124	Escherichia coli
GCA_025156375.1	JAJQZF000000000	SAMN24044990	MCR120	Escherichia coli
GCA_025156355.1	JAJQZE000000000	SAMN24044991	MCR122	Escherichia coli
GCA_025156325.1	JAJQZC000000000	SAMN24044993	MCR126	Escherichia coli
GCA_025156305.1	JAJQYW000000000	SAMN24044999	MCR133	Escherichia coli
GCA_025156295.1	JAJQYZ000000000	SAMN24044996	MCR129	Escherichia coli
GCA_025156265.1	JAJQYU000000000	SAMN24045001	MCR136	Escherichia coli
GCA_025156255.1	JAJQYV000000000	SAMN24045000	MCR134	Escherichia coli
GCA_025156235.1	JAJQYT000000000	SAMN24045002	MCR137	Escherichia coli
GCA_025156205.1	JAJQYS000000000	SAMN24045003	MCR138	Escherichia coli
GCA_025156195.1	JAJQYQ000000000	SAMN24045005	MCR140	Escherichia coli
GCA_025156165.1	JAJQYP000000000	SAMN24045006	MCR142	Escherichia coli
GCA_025156155.1	JAJQYO000000000	SAMN24045007	MCR144	Escherichia coli
GCA_025156135.1	JAJQZA000000000	SAMN24044995	MCR128	Escherichia coli
GCA_025156615.1	JAJRFO000000000	SAMN24046394	MCR111	Escherichia coli
GCA_025156605.1	JAJQZO000000000	SAMN24044981	MCR090	Escherichia coli
GCA_025156595.1	JAJQZN000000000	SAMN24044982	MCR100	Escherichia coli
GCA_025156675.1	JAJRFP000000000	SAMN24046392	MCR077	Escherichia coli
GCA_025156065.1	JAJQYY000000000	SAMN24044997	MCR130	Escherichia coli
GCA_025156075.1	JAJQZB000000000	SAMN24044994	MCR127	Escherichia coli
GCA_025156055.1	JAJQYX000000000	SAMN24044998	MCR131	Escherichia coli
GCA_025156035.1	JAJQYR000000000	SAMN24045004	MCR139	Escherichia coli
GCA_025156005.1	JAJQYI000000000	SAMN24045013	MCR156	Escherichia coli
GCA_025155995.1	JAJQYN000000000	SAMN24045008	MCR148	Escherichia coli
GCA_025155965.1	JAJQYM000000000	SAMN24045009	MCR149	Escherichia coli
GCA_025155955.1	JAJQYL000000000	SAMN24045010	MCR150	Escherichia coli
GCA_025155935.1	JAJQYK000000000	SAMN24045011	MCR152	Escherichia coli
GCA_025155915.1	JAJQYJ000000000	SAMN24045012	MCR154	Escherichia coli
GCA_025155895.1	JAJQYH000000000	SAMN24045014	MCR157	Escherichia coli
GCA_025155875.1	JAJQYG000000000	SAMN24045015	MCR204	Escherichia coli
GCA_025155805.1	JAJQYD000000000	SAMN24045018	MCR208	Escherichia coli
GCA_025155825.1	JAJQYE000000000	SAMN24045017	MCR207	Escherichia coli
GCA_025155795.1	JAJQYC000000000	SAMN24045019	MCR210	Escherichia coli
GCA_025155815.1	JAJQYF000000000	SAMN24045016	MCR205	Escherichia coli
GCA_025155765.1	JAJRPC000000000	SAMN24012598	MCR034	Escherichia coli
GCA_025155755.1	JAJQYB000000000	SAMN24045020	MCR211	Escherichia coli
GCA_025155725.1	JAJRPD000000000	SAMN24012597	MCR033	Escherichia coli
GCA_025155715.1	JAJRPA000000000	SAMN24012600	MCR036	Escherichia coli
GCA_025155695.1	JAJRPB000000000	SAMN24012599	MCR035	Escherichia coli
GCA_025155675.1	JAJROZ000000000	SAMN24012601	MCR037	Escherichia coli
GCA_025155655.1	JAJROY000000000	SAMN24012602	MCR039	Escherichia coli
GCA_025155625.1	JAJROW000000000	SAMN24012604	MCR041	Escherichia coli
GCA_025155615.1	JAJROV000000000	SAMN24012605	MCR042	Escherichia coli
GCA_025155595.1	JAJROX000000000	SAMN24012603	MCR040	Escherichia coli
GCA_025155575.1	JAJROU000000000	SAMN24012606	MCR043	Escherichia coli
GCA_025155555.1	JAJROT000000000	SAMN24012607	MCR045	Escherichia coli
GCA_025155535.1	JAJROS000000000	SAMN24012608	MCR046	Escherichia coli
GCA_025155515.1	JAJROR000000000	SAMN24012609	MCR047	Escherichia coli
GCA_025155495.1	JAJROP000000000	SAMN24012611	MCR051	Escherichia coli
GCA_025155475.1	JAJROQ000000000	SAMN24012610	MCR048	Escherichia coli
GCA_025155455.1	JAJROO000000000	SAMN24012612	MCR052	Escherichia coli
GCA_025155425.1	JAJRON000000000	SAMN24012613	MCR056	Escherichia coli
GCA_025155415.1	JAJROM000000000	SAMN24012614	MCR057	Escherichia coli
GCA_025155395.1	JAJROL000000000	SAMN24012615	MCR058	Escherichia coli
GCA_025155375.1	JAJROI000000000	SAMN24012618	MCR062	Escherichia coli
GCA_025155345.1	JAJROK000000000	SAMN24012616	MCR059	Escherichia coli
GCA_025155325.1	JAJROH000000000	SAMN24012619	MCR063	Escherichia coli
GCA_025155315.1	JAJROJ000000000	SAMN24012617	MCR061	Escherichia coli
GCA_025155295.1	JAJROG000000000	SAMN24012620	MCR064	Escherichia coli
GCA_025155275.1	JAJROF000000000	SAMN24012621	MCR065	Escherichia coli
GCA_025155235.1	JAJROC000000000	SAMN24012624	MCR069	Escherichia coli
GCA_025155245.1	JAJROD000000000	SAMN24012623	MCR068	Escherichia coli
GCA_025155215.1	JAJROE000000000	SAMN24012622	MCR066	Escherichia coli
GCA_025155195.1	JAJROB000000000	SAMN24012625	MCR070	Escherichia coli
GCA_025155135.1	JAJRNY000000000	SAMN24012628	MCR073	Escherichia coli
GCA_025155155.1	JAJRNZ000000000	SAMN24012627	MCR072	Escherichia coli
GCA_025155125.1	JAJROA000000000	SAMN24012626	MCR071	Escherichia coli
GCA_025155115.1	JAJRNT000000000	SAMN24012633	MCR084	Escherichia coli
GCA_025155095.1	JAJRNX000000000	SAMN24012629	MCR079	Escherichia coli
GCA_025155055.1	JAJRNU000000000	SAMN24012632	MCR083	Escherichia coli
GCA_025155045.1	JAJRNW000000000	SAMN24012630	MCR080	Escherichia coli
GCA_025155035.1	JAJRNV000000000	SAMN24012631	MCR081	Escherichia coli
GCA_025155015.1	JAJRNS000000000	SAMN24012634	MCR085	Escherichia coli
GCA_025154985.1	JAJRNQ000000000	SAMN24012636	MCR087	Escherichia coli
GCA_025154975.1	JAJRNR000000000	SAMN24012635	MCR086	Escherichia coli
GCA_025154955.1	JAJQNE000000000	SAMN23961558	MCR001	Escherichia coli
GCA_025154935.1	JAJQNG000000000	SAMN23961560	MCR004	Escherichia coli
GCA_025154915.1	JAJQNF000000000	SAMN23961559	MCR002	Escherichia coli
GCA_025154835.1	JAJQNK000000000	SAMN23961564	MCR013	Escherichia coli
GCA_025154865.1	JAJQNH000000000	SAMN23961561	MCR005	Escherichia coli
GCA_025154845.1	JAJQNL000000000	SAMN23961565	MCR014	Escherichia coli
GCA_025154825.1	JAJQNI000000000	SAMN23961562	MCR010	Escherichia coli
GCA_025154815.1	JAJQNJ000000000	SAMN23961563	MCR012	Escherichia coli
GCA_025154735.1	JAJQNN000000000	SAMN23961567	MCR019	Escherichia coli
GCA_025154725.1	JAJQNQ000000000	SAMN23961570	MCR049	Escherichia coli
GCA_025154745.1	JAJQNP000000000	SAMN23961569	MCR026	Escherichia coli
GCA_025154755.1	JAJQNM000000000	SAMN23961566	MCR017	Escherichia coli
GCA_025154715.1	JAJQNO000000000	SAMN23961568	MCR025	Escherichia coli
GCA_025154675.1	JAJQNS000000000	SAMN23961572	MCR055	Escherichia coli
GCA_025154685.1	JAJQNU000000000	SAMN23961574	MCR074	Escherichia coli
GCA_025154655.1	JAJQNR000000000	SAMN23961571	MCR053	Escherichia coli
GCA_025154615.1	JAJQNT000000000	SAMN23961573	MCR060	Escherichia coli
GCA_025154625.1	JAJQNV000000000	SAMN23961575	MCR076	Escherichia coli
GCA_025154595.1	JAJQNW000000000	SAMN23961576	MCR088	Escherichia coli
GCA_025154565.1	JAJQOB000000000	SAMN23961581	MCR096	Escherichia coli
GCA_025154555.1	JAJQNY000000000	SAMN23961578	MCR092	Escherichia coli
GCA_025154525.1	JAJQNX000000000	SAMN23961577	MCR089	Escherichia coli
GCA_025154515.1	JAJQNZ000000000	SAMN23961579	MCR093	Escherichia coli
GCA_025154495.1	JAJQOA000000000	SAMN23961580	MCR095	Escherichia coli
GCA_025154475.1	JAJQOC000000000	SAMN23961582	MCR097	Escherichia coli
GCA_025154455.1	JAJQOD000000000	SAMN23961583	MCR098	Escherichia coli
GCA_025154435.1	JAJQOE000000000	SAMN23961584	MCR099	Escherichia coli
GCA_025154415.1	JAJQOF000000000	SAMN23961585	MCR105	Escherichia coli
GCA_025154395.1	JAJQOG000000000	SAMN23961586	MCR108	Escherichia coli
GCA_025154375.1	JAJQOH000000000	SAMN23961587	MCR109	Escherichia coli
GCA_025154335.1	JAJQOK000000000	SAMN23961590	MCR114	Escherichia coli
GCA_025154345.1	JAJQOI000000000	SAMN23961588	MCR110	Escherichia coli
GCA_025154315.1	JAJQOJ000000000	SAMN23961589	MCR113	Escherichia coli
GCA_025154275.1	JAJQOM000000000	SAMN23961592	MCR143	Escherichia coli
GCA_025154295.1	JAJQOL000000000	SAMN23961591	MCR121	Escherichia coli
GCA_025154215.1	JAJQOP000000000	SAMN23961595	MCR153	Escherichia coli
GCA_025154255.1	JAJQOO000000000	SAMN23961594	MCR151	Escherichia coli
GCA_025154185.1	JAJQOQ000000000	SAMN23961596	MCR158	Escherichia coli
GCA_025154225.1	JAJQON000000000	SAMN23961593	MCR147	Escherichia coli
GCA_025154175.1	JAJQOS000000000	SAMN23961598	MCR161	Escherichia coli
GCA_025154155.1	JAJQOR000000000	SAMN23961597	MCR159	Escherichia coli
GCA_025154135.1	JAJQOT000000000	SAMN23961599	MCR218	Escherichia coli
GCA_025156695.1	JAJREM000000000	SAMN24046391	MCR050	Klebsiella pneumoniae
GCA_025154115.1	JAJQOU000000000	SAMN23961600	MCR160	Klebsiella pneumoniae
GCA_025156655.1	JAJREL000000000	SAMN24046393	MCR107	Klebsiella pneumoniae
GCA_025156565.1	JAJREJ000000000	SAMN24046396	MCR117	Klebsiella pneumoniae
GCA_025156555.1	JAJREK000000000	SAMN24046395	MCR112	Klebsiella pneumoniae

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Bacteria Genome sequencing and assembly

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