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1.

Discovery and Validation of a 15-Gene Prognostic Signature for Clear Cell Renal Cell Carcinoma

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Urology, University of Michigan
Accession:
PRJNA1071056
ID:
1071056
2.

Single-cell transcriptional profiling of clear cell renal cell carcinoma reveals a tumor-associated endothelial tip cell phenotype

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Single Cell Analytics, Life Sciences Center, Institute of Biotechnology, Vilnius University
Accession:
PRJNA1013059
ID:
1013059
3.

Morc2a variants cause hydroxyl radical-mediated neuropathy and are rescued by GHKL ATPase gene therapy

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Systems Biology and Medicine Laboratory, School of Biological Sciences, Seoul National University
Accession:
PRJNA988036
ID:
988036
4.

Fungal metabolism and free amino acid content may predict nitrogen transfer to the host plant in the ectomycorrhizal relationship between Pisolithus spp. and Eucalyptus grandis

Project data type: Transcriptome or Gene expression
Scope:
Multispecies
Hawkesbury Institute for the Environment, Western Sydney University
Accession:
PRJNA986873
ID:
986873
5.

The Validation set of the genomic nodal index (GNI) in 2014

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Shinzaburo Noguchi, Breast and Endocrine Surgery, Osaka University
Accession:
PRJNA980140
ID:
980140
6.

The second Validation set of the 95GC in 2013.

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Shinzaburo Noguchi, Breast and Endocrine Surgery, Osaka University
Accession:
PRJNA978565
ID:
978565
7.

The Validation Set for the initial development of the 95GC in 2011.

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Shinzaburo Noguchi, Breast and Endocrine Surgery, Osaka University
Accession:
PRJNA975564
ID:
975564
8.
9.

A549 transcriptomic response to nanomaterials, intact and degraded Mn3O4-functionalized graphene, Mn3O4 nanoparticles

Project data type: Other
Scope:
Monoisolate
iccram-university of burgos
Accession:
PRJEB34526
ID:
917880
10.

Glutathione dynamics is a potential diagnostic and therapeutic trait determining the neoadjuvant chemotherapy response to bladder cancer

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Department of Biomedical Sciences, University of Ulsan College of Medicine
Accession:
PRJNA877454
ID:
877454
11.

Redox Imbalance in COVID-19 Pathophysiology

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
2072A, HSC North, Floor 2, MicroBiology, Immunology, and Cell Biology, West Virginia University
Accession:
PRJNA873078
ID:
873078
12.

The protective effect of edaravone on TDP-43 plus oxidative stress-induced neurotoxicity in neuronal cells: Analysis of its neuroprotective mechanisms using RNA sequencing

Organism:
Rattus norvegicus
Taxonomy:
Rattus norvegicus (Norway rat)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Mitsubishi Tanabe Pharma Corporation
Accession:
PRJNA856268
ID:
856268
13.

Insight into the pulmonary molecular toxicity of heated tobacco products using human bronchial and alveolar mucosa models at air-liquid interface

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Institute of Experimental Genetics, Helmholtz Zentrum Muenchen
Accession:
PRJNA813572
ID:
813572
14.

Nitrogen fertilization disrupts the temporal dynamics of arbuscular mycorrhizal fungal hyphae but not spore density and community composition in a wheat field

Project data type: Other
Scope:
Monoisolate
INSTITUTE OF MICROBIOLOGY, CHINESE ACADEMY OF SCIENCES
Accession:
PRJEB37887
ID:
808939
15.

lncRNA transcriptome of cancer tissues, adjacent normal tissues and plasma exosomes of patients with intrahepatic cholangiocarcinoma

Project data type: Raw sequence reads
Scope:
Multispecies
Peking Union Medical College
Accession:
PRJNA777408
ID:
777408
16.

Rapid Acceleration of Diagnostics - Radical (RADx-rad): Direct Bioelectronic Detection of SARS-Cov-2 From Saliva Using Singlemolecule Field-effect Transistor Array

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Phenotype or Genotype
Scope:
Multiisolate
QUICKSILVER BIOSCIENCES, INC.
Accession:
PRJNA753194
ID:
753194
17.
18.

Irrigation and fertilization effects on arbuscular mycorrhizal fungi depend on growing season in a dryland maize agroecosystem

Project data type: Other
Scope:
Monoisolate
CHINESE ACADEMIC OF SCIENCE
Accession:
PRJEB38513
ID:
675803
19.

Plasma cells are enriched in localized prostate cancer in black men and are associated with improved outcomes [Validation Cohort]

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Decipher Biosciences, Inc.
Accession:
PRJNA661756
ID:
661756
20.

A Nine-gene Signature for Predicting the Response to Preoperative Chemoradiotherapy in Patients with Locally Advanced Rectal Cancer

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
CbsBioscience
Accession:
PRJNA578915
ID:
578915

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