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1.

Specific CD4+ T cell phenotypes associate with bacterial control in people who ‘resist’ infection with Mycobacterium tuberculosis

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Stanford University
Accession:
PRJNA1112843
ID:
1112843

2.

MR1-restricted T cell clonotypes are associated with “resistance” to Mycobacterium tuberculosis infection

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
University of Washington
Accession:
PRJNA1103202
ID:
1103202

3.

The mRNA-binding protein KSRP limits the inflammatory response of macrophages

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Dermatology, University Medical Center Mainz
Accession:
PRJNA1086955
ID:
1086955

4.

Effect of human recombinent Annexin A5 on gene expression of bone marrow derived macrophages polarizaionn with LPS and IFN-gama

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Shanghai 9th People’s Hospital, Shanghai Jiao Tong University School of Medicine
Accession:
PRJNA1070312
ID:
1070312

5.

Mining the Methylome for New Insights into Bovine Tuberculosis.

Project data type: Other
Scope:
Monoisolate
European Bioinformatics Institute
Accession:
PRJEB67806
ID:
1032390

6.

In vitro human H9 ESC-derived microglia scRNA seq

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Laboratory for the Research of Neurodegenerative Diseases, VIB-KU Leuven Center for Brain & Disease Research, KULeuven
Accession:
PRJNA1027828
ID:
1027828

7.

Mus musculus

RNA and ATAC sequencing of BMDCs after stimulation via FcRgamma

Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Monoisolate
Genome Information Research Center, Osaka University
Accession:
PRJDB12454
ID:
1022605

8.

The immunopathological landscape of human pre-TCRα deficiency: from rare to common variants

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Other
Scope:
Multiisolate
Genome Analysis Core, Vaccine Research Center, NIAID, NIH
Accession:
PRJNA1020588
ID:
1020588

9.

Analysis of bacterial communities between Arabian Sea OMZ and non-OMZ regions using 16S rRNA gene metabarcoding

Project data type: Raw sequence reads
Scope:
Multispecies
University of Easttern Finland
Accession:
PRJNA1019226
ID:
1019226

10.

Leukotriene B4 receptor 2 governs macrophage migration during tissue inflammation

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Medicine, University of Chicago
Accession:
PRJNA1014419
ID:
1014419

11.

Depletion of tet2 results in age-dependent changes in DNA methylation and gene expression in a zebrafish model of myelodysplastic syndrome [RNAseq]

Organism:
Danio rerio
Taxonomy:
Danio rerio (zebrafish)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Garrett-Bakelman Lab, Department of Biochemistry and Molecular Genetics, University of Virginia
Accession:
PRJNA998264
ID:
998264

12.

Depletion of tet2 results in age-dependent changes in DNA methylation and gene expression in a zebrafish model of myelodysplastic syndrome [DNAmethylation]

Organism:
Danio rerio
Taxonomy:
Danio rerio (zebrafish)
Project data type: Epigenomics
Scope:
Multiisolate
Garrett-Bakelman Lab, Department of Biochemistry and Molecular Genetics, University of Virginia
Accession:
PRJNA998262
ID:
998262

13.

Differential gene expression analysis of trisomy 21 and euploid hematopoietic progenitor cells derived from human pluripotent stem cells.

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
BCH
Accession:
PRJNA997982
ID:
997982

14.

Transcriptome analysis of longissimus dorsi muscle treated with melatonin in weaned piglets

Organism:
Sus scrofa
Taxonomy:
Sus scrofa (pig)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Zhejiang University
Accession:
PRJNA994569
ID:
994569

15.

Pre-existing interferon gamma conditions the lung to mediate early control of SARS-CoV-2

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
NIAID, NIH
Accession:
PRJNA991639
ID:
991639

16.

Preferential differential gene expression in the WC1.1+ γδ T cell compartment in cattle naturally infected with Mycobacterium bovis.

Project data type: Other
Scope:
Monoisolate
European Bioinformatics Institute
Accession:
PRJEB63562
ID:
989979

17.

Impaired age-associated mitochondrial translation is mitigated by exercise and PGC-1α

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Biozentrum, University of Basel
Accession:
PRJNA976340
ID:
976340

18.

Landscape of TFs binding in mouse early embryos [HiCuT]

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Epigenomics
Scope:
Monoisolate
Tongji University
Accession:
PRJNA949561
ID:
949561

19.

Monocyte-derived Macrophages

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Boehringer Ingelheim Pharma GmbH & Co KG
Accession:
PRJNA948022
ID:
948022

20.

CoMVseq

Genomic epidemiology of SARS-CoV-2 variants circulating in a German federal state, Mecklenburg-Western Pomerania, in 2020-2022

Project data type: Other
Scope:
Monoisolate
university medicine greifswald
Accession:
PRJEB59319
ID:
944032

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