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Organizing biological data
Nested PCR strategy for rpoB metabarcoding studies
Optimizing rpoB metabarcoding for low-concentration bacterial DNA in eukaryotic matrices using nested PCR: application to insect microbiota
Differential contributions of the gut microbiota and metabolome to pathomechanisms in Ulcerative Colitis: an in vitro analysis
Gut microbiota and metabolome in UC
Unraveling sex-specific transcript dynamics: insights from embryonic development of Apis cerana worker and drone bees
Metabarcoding with Illumina and Oxford Nanopore Technologies Provides Unique Insight into the Mycobiota of Tree Seeds
Metabarcoding for Tree Seeds - ONT data
Metabarcoding for Tree Seeds
Timing matters: Late, but not early, exercise training ameliorates MASLD in part by modulating the gut-liver axis in mice
While exercise is generally beneficial for the amelioration of Metabolic dysfunction-associated steatotic liver disease (MASLD), little is known about the best timing of exercise. Here we demonstrate in APOE*3-Leiden.CETP mice, an MASLD model, that specifically late, but not early, active period aerobic exercise leads to fat loss, amelioration of MASLD development and lower liver lipids. These changes coincide with a change in the gut microbiota composition of only late exercising mice towards a short-chain fatty acids producing profile. A fecal microbiota transplantation from late exercising mice to sedentary mice has partially reproduced MASLD-ameliorating effects of late exercise, depending on the success of the transplantation. These findings demonstrate the importance of the timing when conducting lifestyle interventions and lay a foundation for future clinical trials which can be used to adapt clinical guidelines for MASLD treatment.
Unlocking Enzyme Potential: A Versatile Pathway for Nanocellulose Synthesis through Enzymatic Hydrolysis
Chlorella sp. UMT-B8
Chlorella sp. UMT-B8 Genome sequencing
16S rRNA Salda Lake Oxford Nanopore MinION Analyses
GHT-SELEX data for transcription factors analyzed by the Codebook Consortium
Genomic HT-SELEX data for: GHT-SELEX demonstrates unexpectedly high intrinsic sequence specificity of human transcription factors
Supplementation with the short-chain fatty acid acetate for improving age-associated arterial dysfunction in mice
HIGH-FREQUENCY BLANES BAY MICROBIAL OBSERVATORY WINTER 18S RNA
High-frequency sampling of winter and summer microbial communities winter 18S RNA
HT-SELEX data for transcription factors analyzed by the Codebook Consortium
HT-SELEX data for: GHT-SELEX demonstrates unexpectedly high intrinsic sequence specificity of human transcription factors
Metagenomic sequencing of endophyte communities in the stem of Dracaena cambodiana at different injury stages
Microbiota associated with spiders species from the genus Pardosa (Arachnida, Araneae)
Transcriptional response of the cacao pathogen Moniliophthora perniciosa to a strobilurin fungicide
Impact of Ketogenic and Mediterranean Diets on Gut Microbiota Profile and Clinical Status in Drug-Naïve Patients with Diabesity: a 12-Month Follow-up
NAFLD
Energy metabolism function and gene expression reprogramming of hepatic steatosis by using high fat load NAFLD cell model
Sourdough isolate genome sequencing
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