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Organizing biological data
Microbiome of Brassica oleracea leaves
Shotgun metagenomic analysis of Brassica oleracea leaves
CNSI
Metagenomic sequencing of cerebral spinal fluid (CSF)
Bacterial membrane vesicles
Bacterial membrane vesicles restore gut anaerobiosis
Care Home 3410
Resident and bacterial genomic features associated with clinical E. coli isolates from care homes
Impact of substrate digestibility on microbial community
substrate digestibility
shk-1 KO C.elegans with and without infection of vibrio cholerae
Interplay between antipredator behavior, parasitism, and gut microbiome in wild stickleback populations
E.coli sequencing
Bulk RNA-seq on mock and HCMV-infected cholangiocyte organoids
Escherichia coli
Escherichia coli Genome sequencing and assembly
Genomic Insights into Cefiderocol Resistance: A Detailed Whole Genome Analysis
Multi-resistant Escherichia coli from Egypt
Whole genome sequencing, E. coli
Novel zoonotic cases of Plasmodium simium from Sao Paulo with the first reference genome of the Brazilian strain.
By sequencing P. simium DNA from Brazil using both Oxford Nanopore and Illumina platforms, we assembled the first reference genome (Ps_SaoPaulo; 21.8 Mb).
CIRCLES-POULTRY
Impact of Nutritional Interventions on Chicken Gut Microbiome
Larotrectinib for NTRK- fusion-positive Glioblastoma (GBM): tracing in parallel the salivary and gut microbiota profiles to assist targeted anticancer treatment in a case study
Salivary and Gut Microbiota Profiles Upon Larotrectinib for NTRK- fusion-positive Glioblastoma
CIRCLES-PIG
Impact of Diverse Farming Conditions and Nutritional Interventions on Swine Gut Microbiota
Uncommon_potential_pathogens
Discovering putative pathogens in animals
Hybrid sequencing of Chromosome and Plasmids from Multidrug Resistant Escherichia coli from Cambodia: Are Megaplasmids driving antibiotic resistance genes?
Hybrid sequencing of ESBL and carbapenemase-producing E. coli isolated from patients in Cambodia
Escherichia coli str. K-12 substr. MDS42
Genomic DNA of gene-deficient strains of E. coli after evolutionary experiments against antibiotics.
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