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Items: 1 to 20 of 1092

  • The following terms were not found in BioProject: Lop.opsmall, Cyrillicopopt.
1.

Deciphering the role of RNA in regulating CTCF’s DNA binding affinity in leukemia cells [CTCF-ChIP]

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Epigenomics
Scope:
Multiisolate
Center for Applied Bioinformatics, St Jude Children's Research Hosipital
Accession:
PRJNA1184930
ID:
1184930

2.

TE-Seq: A Transposable Element Annotation and RNA-Seq Pipeline

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Brown University
Accession:
PRJNA1178097
ID:
1178097

3.

Gene expression profile (targeted mouse immune response panel) and V(D)J sequences at single cell level of day 10 post-IAV infected splenic T cells in WT mice and LCKFREE mice

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Monoisolate
Monash University
Accession:
PRJNA1177772
ID:
1177772

4.

Haplotype-resolved genome sequence of Cassava (Manihot esculenta) cultivar COL40

Organism:
Manihot esculenta
Taxonomy:
Manihot esculenta (cassava)
Umbrella project
TU Brausnchweig
Accession:
PRJNA1176113
ID:
1176113

5.

Manihot esculenta cultivar:COL40

Haplotype-resolved genome sequence of Cassava (Manihot esculenta) cultivar COL40 HapB

Organism:
Manihot esculenta
Taxonomy:
Manihot esculenta (cassava)
Project data type: Assembly
Scope:
Monoisolate
TU Braunschweig
Accession:
PRJNA1172198
ID:
1172198

6.

Manihot esculenta cultivar:COL40

Haplotype-resolved genome sequence of Cassava (Manihot esculenta) cultivar COL40 HapA

Organism:
Manihot esculenta
Taxonomy:
Manihot esculenta (cassava)
Project data type: Assembly
Scope:
Monoisolate
TU Brausnchweig
Accession:
PRJNA1172196
ID:
1172196

7.

Mode, tempo and functional consequences of transposable element mobilization in relation to mating systems

Umbrella project
Genoscope
Accession:
PRJEB80540
ID:
1166553

8.

Investigating CLSY proteins and Pol-IV complex interaction in controlling DNA methylation patterns in Arabidopsis thaliana

Organism:
Arabidopsis thaliana
Taxonomy:
Arabidopsis thaliana (thale cress)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Salk Institute for Biological Studies
Accession:
PRJNA1165818
ID:
1165818

9.

First isolation of Vibrio cidicii at te Denmark shores of the Baltic Sea

Project data type: Genome sequencing
Scope:
Monoisolate
University of Copenhagen, Faculty of Health and Medical Sciences
Accession:
PRJEB80374
ID:
1163844

10.

First multiomics association study of trace element concentration and RNA sequencing profiles in human cancers

Project data type: Raw sequence reads
Scope:
Multispecies
Laboratory of Translational Genomic Bioinformatics
Accession:
PRJNA1160473
ID:
1160473

11.

Rio-seq Analysis on SETD2-Deficient and Control Intestinal Epithelial Cells

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Shanghai Jiao Tong University
Accession:
PRJNA1159806
ID:
1159806

12.

TE impacts recombination

Project data type: Raw sequence reads
Scope:
Multispecies
University of California-Irvine
Accession:
PRJNA1159377
ID:
1159377

13.

Ultra-Sensitive Detection of Transposon Insertions Across Multiple Families by Transposable Element Display Sequencing

Transponsable Element Display Sequencing

Project data type: Other
Scope:
Monoisolate
Institut des Sciences des Plantes - Paris-Saclay (France)
Accession:
PRJEB79758
ID:
1158131

14.

Culicoides imicola isolate:2023.TE.13242.1.1-4

Culicoides imicola isolate:2023.TE.13242.1.1-4 Genome sequencing and assembly

Taxonomy:
Culicoides imicola
Project data type: Genome sequencing and assembly
Scope:
Monoisolate
CSIRO Applied Genomics Initiative
Accession:
PRJNA1155864
ID:
1155864

15.

Identifying crossover locations from leaves of Arabidopsis thaliana Col x Ler F1 plants (WT and recq4) using Nanopore-seq and COmapper

Project data type: Other
Scope:
Monoisolate
European Bioinformatics Institute
Accession:
PRJEB79145
ID:
1151488

16.

Identifying crossover locations from bulked seedlings of Arabidopsis thaliana Col x Ler F2 plants (WT and recq4) using Nanopore-seq and COmapper

Project data type: Other
Scope:
Monoisolate
European Bioinformatics Institute
Accession:
PRJEB79133
ID:
1151484

17.

Temporal and spatial niche partitioning in the retrotransposon community of the Drosophila genome

Project data type: Other
Scope:
Monoisolate
CNRS - CENTRE NATIONAL DE LA RECHERCHE SCIENTIFIQUE
Accession:
PRJEB75331
ID:
1151377

18.

Transcriptomic changes in bronchoalovelar derived macrophages after expsoure to whole body cigarette smoke exposure (8 weeks)

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Carpenter lab, MCD Biology, University of California Santa Crtuzz
Accession:
PRJNA1150258
ID:
1150258

19.

A transposon-induced epigenetic change controls EFR-mediated pathogen susceptibility

Project data type: Other
Scope:
Monoisolate
Insituto de Agrobiotecnologia del Litoral
Accession:
PRJEB65271
ID:
1147083

20.

HPV induced R-loop formation represses innate immune gene expression while activating DNA damage repair pathways [H3K9me3 ChIP seq]

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Epigenomics
Scope:
Multiisolate
Northwestern University
Accession:
PRJNA1144988
ID:
1144988

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