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Organizing biological data

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The following terms were not found in BioProject: I9op.opoptrade, existsop.

Select item 11279491.

Whole-genome characterization of Escherichia coli isolates from patients with bacteraemia presentating with sepsis or septic shock: the PROBAC-EC multicentre study

PROBAC-EC multicentre study

: Project data type: Other

Scope:: Monoisolate

probac ec

Accession:: PRJEB62601
ID:: 1127949

Select item 11261072.

Resolving the three-dimensional interactome of Human Accelerated Regions during human and chimpanzee neurodevelopment

: Project data type: Other

Scope:: Multispecies

Noonan, Genetics, Yale University

Accession:: PRJNA1126107
ID:: 1126107

Select item 11234863.

Oryza sativa strain:Nipponbare, Kasalath, 93-11

Allele-specific CUT&RUN analysis of H3K27me3 in F1 endosperm and embryo from the reciprocal cross

Organism:: Oryza sativa

Taxonomy:: Oryza sativa (Asian cultivated rice)

: Project data type: Targeted Locus (Loci)

Scope:: Monoisolate

Epigenome division, Kihara Institute for Biological Research, Yokohama City University

Accession:: PRJDB14903
ID:: 1123486

Select item 11207904.

Mitochondrial respiration in microglia is essential for response to demyelinating injury but not proliferation

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Chandel Laboratory, Pulmonary and Critical Care Medicine, Northwestern University

Accession:: PRJNA1120790
ID:: 1120790

Select item 11203365.

Notch induces transcription by stimulating release of paused RNA Pol II without increasing chromatin accessibility [ChIP-seq]

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Epigenomics

Scope:: Multiisolate

Blacklow Lab, BCMP, Harvard Medical School

Accession:: PRJNA1120336
ID:: 1120336

Select item 11185786.

CAGE-Seq of EHV-1 transcriptome of a mixed infection

CAGE-Seq of EHV-1 transcriptome of a mixed infection. The virus isolate is the Mc13, which was propgataed on Rk-13 cells.

: Project data type: Other

Scope:: Monoisolate

UNIVERSITY OF SZEGED

Accession:: PRJEB60060
ID:: 1118578

Select item 11181827.

H3K36me3 enrichemnt on the genome of Komagataella phaffii GS115

: Project data type: Raw sequence reads

Scope:: Multispecies

East China university of Science and Technology

Accession:: PRJNA1118182
ID:: 1118182

Select item 11147918.

A two-step regulatory mechanism dynamically controls histone H3 acetylation by SAGA complex at growth-related promoters

Organism:: Saccharomyces cerevisiae

Taxonomy:: Saccharomyces cerevisiae (brewer's yeast)

: Project data type: Epigenomics

Scope:: Multiisolate

Francoise Stutz, Department of Molecular and Cellular Biology, University of Geneva

Accession:: PRJNA1114791
ID:: 1114791

Select item 11128439.

T cell phenotypes in M. tuberculosis ‘resisters’ are associated with bacterial control

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Stanford University

Accession:: PRJNA1112843
ID:: 1112843

Select item 111136610.

Transcriptomic analysis of human vascular endothelial cell line (EA.hy926) exposed to okadaic acid

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Incheon National University

Accession:: PRJNA1111366
ID:: 1111366

Select item 111050411.

Tonsil Atlas FASTQ files

: Project data type: Other

Scope:: Monoisolate

European Bioinformatics Institute

Accession:: PRJEB75429
ID:: 1110504

Select item 110978212.

DPF2 reads histone lactylation to drive transcription and tumorigenesis [CUT&TAG]

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Epigenomics

Scope:: Multiisolate

The Province and Ministry Co-sponsored Collaborative Innovation Center for Medical Epigenetics, Department of Biochemistry and Molecular Biology, TianjinMedical University

Accession:: PRJNA1109782
ID:: 1109782

Select item 110977213.

DPF2 reads histone lactylation to drive transcription and tumorigenesis [RNA-seq]

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

The Province and Ministry Co-sponsored Collaborative Innovation Center for Medical Epigenetics, Department of Biochemistry and Molecular Biology, TianjinMedical University