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1.

ScRNA-seq and scATAC-seq reveal that sertoli cells mediate spermatogenesis disorders through stage-specific communications in non-obstructive azoospermia

Project data type: Raw sequence reads
Scope:
Multispecies
The Eighth Affiliated Hospital, Sun Yat-sen University
Accession:
PRJNA1177103
ID:
1177103
2.

Transcriptional profile of the rat cardiovascular system at single cell resolution

Organism:
Rattus norvegicus
Taxonomy:
Rattus norvegicus (Norway rat)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Lab of Patrick Ellinor, Broad Institute
Accession:
PRJNA1176479
ID:
1176479
3.

Vasculogenic Skin Reprogramming Requires TET-mediated Gene Demethylation in Fibroblasts for Rescuing Impaired Perfusion in Diabetes

Project data type: Raw sequence reads
Scope:
Multispecies
McGowan Institute for Regenerative Medicine
Accession:
PRJNA1175408
ID:
1175408
4.

Mapping cells thorugh time and space - pancreatic endocrinogenesis multiome

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Other
Scope:
Multiisolate
Institute of Diabetes and Regeneration Research, Helmholtz Zentrum München German Research Center for Environmental Health
Accession:
PRJNA1151677
ID:
1151677
5.

Complement and microglia activation mediates stress-induced synapse loss in layer 2/3 of the medial prefrontal cortex

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
University of Texas Health at San Antonio
Accession:
PRJNA1138783
ID:
1138783
6.

Methylglyoxal activates the NRF2 pathway and impairs immune responses controlling the growth control of Mycobacterium tuberculosis (Mtb) in macrophages.

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Karolinska Institutet
Accession:
PRJNA1129523
ID:
1129523
7.

Analytical performance of OncoPrism-HNSCC, an RNA-based assay to inform immune checkpoint inhibitor treatment decisions for recurrent/metastatic head and neck squamous cell carcinoma

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Cofactor Genomics
Accession:
PRJNA1124904
ID:
1124904
8.

Synthetic trimeric Interleukin-6 receptor complexes with a STAT3 phosphorylation dominated activation profile

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Heinrich-Heine-Universität
Accession:
PRJNA1110777
ID:
1110777
9.

Mus musculus

RNA-Seq analysis of kidney from female 5/6Nx B6 mice and female sham B6 mice

Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Monoisolate
Nephrology and Laboratory Medicine, Kanazawa university
Accession:
PRJDB15715
ID:
1104013
10.

The role of Akt1/2/3 in pancreatic cancer progression

Project data type: Raw sequence reads
Scope:
Multispecies
Stony Brook University
Accession:
PRJNA1077997
ID:
1077997
11.

Effect of knockdown Tbl1xr1 on gene expression after 2/3 hepatectomy

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Miguel, South China Institute for Stem Cell Biology and Regenerative Medicine Key Laboratory of Regenerative Biology, CAS, Guangzhou Institutes of Biomedicine and Health,Chinese Academy of Sciences
Accession:
PRJNA1070645
ID:
1070645
12.

Genomic context-dependent histone H3K36 methylation by Drosophila methyltransferases

Organism:
Drosophila melanogaster
Taxonomy:
Drosophila melanogaster (fruit fly)
Project data type: Epigenomics
Scope:
Multiisolate
Becker lab, Molecular Biology, Biomedical Center, Ludwig Maximilians University Munich
Accession:
PRJNA1065448
ID:
1065448
13.

Clinically used broad-spectrum antibiotics compromise inflammatory monocyte-dependent antibacterial defense in the lung

Project data type: Raw sequence reads
Scope:
Multispecies
Charite
Accession:
PRJNA1064467
ID:
1064467
14.

RNA-binding protein TRA2A promotes glioblastoma by mediating m6A RNA modification of IFITs to recycle p-EGFR

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Other
Scope:
Multiisolate
Shenyang Pharmaceutical University
Accession:
PRJNA1060727
ID:
1060727
15.

Triticum aestivum

Evolutionary dynamics of wheat D epigenome

Taxonomy:
Triticum aestivum (bread wheat)
Project data type: Other
Scope:
Multispecies
Beijing Institute of Genomics Chinese Acad of Sci - Key Lab
Accession:
PRJNA1058569
ID:
1058569
16.

Mus musculus

Transcriptomic study of mouse liver after 2/3 PHx

Taxonomy:
Mus musculus (house mouse)
Project data type: Other
Scope:
Multiisolate
Beijing Institute of Genomics Chinese Acad of Sci - Key Lab
Accession:
PRJNA1057702
ID:
1057702
17.

Nucleophosmin sustains WNT-driven cell proliferation and tumor initiation in vivo

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Other
Scope:
Multiisolate
CRUK Scotland Institute
Accession:
PRJNA1051495
ID:
1051495
18.

Split application of phosphorus fertilizer in Chinese milk vetch-rice rotation system reshapes soil diazotrophic community structure

Project data type: Raw sequence reads
Scope:
Multispecies
Huazhong Agricultural University
Accession:
PRJNA1025149
ID:
1025149
19.

Defining Spatiotemporal Gene Modules in Liver Regeneration Using Analytical Dynamic Visual Spatial -Omics Representation (ADViSOR)

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Other
Scope:
Multiisolate
Pathology, University of Pittsburgh
Accession:
PRJNA1021671
ID:
1021671
20.

ChIP-seq to test histone methylation in Bd21-3 and the jmj1-1 mutant.

Organism:
Brachypodium distachyon
Taxonomy:
Brachypodium distachyon (stiff brome)
Project data type: Epigenomics
Scope:
Multiisolate
School of Life Science, Fudan University
Accession:
PRJNA1017412
ID:
1017412

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