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Organizing biological data

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The following term was not found in BioProject: @JYP24op.

Select item 10351071.

Comparative transcriptome analysis reveals molecular damage associated with cryopreservation in Crassostrea angulata D-larvae rather than to cryoprotectant exposure

Taxonomy:: Magallana angulata

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

1.8, Aquaculture research group (Aquagroup), Centre of Marine Sciences (CCMAR)

Accession:: PRJNA1035107
ID:: 1035107

Select item 9714922.

Non-pathogenic and pathogenic leaf-colonising bacteria elicit qualitatively similar responses

Organism:: Arabidopsis thaliana

Taxonomy:: Arabidopsis thaliana (thale cress)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

School of Biological Sciences, University of Canterbury

Accession:: PRJNA971492
ID:: 971492

Select item 9714893.

Non-pathogenic leaf-colonising bacteria elicit plant immune responses in a colonisation density-dependent manner

Organism:: Arabidopsis thaliana

Taxonomy:: Arabidopsis thaliana (thale cress)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

School of Biological Sciences, University of Canterbury

Accession:: PRJNA971489
ID:: 971489

Select item 9297824.

Divergent gut microbiota in two closely related house mouse subspecies under common garden conditions

: Project data type: Other

Scope:: Monoisolate

Department of Zoology

Accession:: PRJEB51786
ID:: 929782

Select item 8014075.

Spatial Transcriptomics of Joint-Draining Popliteal Lymph Nodes from Wild-type and TNF-Tg Mice with Early and Advanced Inflammatory-Erosive Arthritis

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Edward Schwarz, Center for Musculoskeletal Research, University of Rochester Medical Center

Accession:: PRJNA801407
ID:: 801407

Select item 7483786.

ARID1A loss derepresses human endogenous retrovirus-H to modulate BRD4-dependent transcription

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Human Key Laboratory of Medical Genetics, Central South University

Accession:: PRJNA748378
ID:: 748378

Select item 7385377.

Depletion of m6A writers and readers impair 3'-end formation in Toxoplasma

Taxonomy:: Toxoplasma gondii

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Pharmacology & Toxicology, Indiana University School of Medicine

Accession:: PRJNA738537
ID:: 738537

Select item 6009228.

Regulation of the RNAPII Pool Is Integral to the DNA Damage Response [RNA-seq]

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Bioinformatics & Biostatistics, The Francis Crick Institute

Accession:: PRJNA600922
ID:: 600922

Select item 5779439.

Caveolin1 Deficiency: A Type I Endothelial Interferonopathy Associated with Pulmonary Arterial Hypertension

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

CCMD, Clinical Center

Accession:: PRJNA577943
ID:: 577943

Select item 57447710.

Comparative analysis of global transcriptional profile of Escherichia coli and Schizosaccharomyces pombe in respiratory and fermentative growth: Inferring the evolution of analog circuits of post-transcriptional regulation

: Project data type: Transcriptome or Gene expression

Scope:: Multispecies

Unidad Universitaria de Secuenciación Masiva y Bioinformática, Universidad Nacional Autonoma de Mexico

Accession:: PRJNA574477
ID:: 574477

Select item 56443411.

Helicase-like transcription factor (Hltf)-deletion activates Hmgb1-Rage axis and granzyme A-mediated killing of pancreatic β cells resulting in neonatal lethality

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

5B136 & 137, Cell Biology & Biochemistry, Texas Tech University HSC

Accession:: PRJNA564434
ID:: 564434

Select item 55258512.

Galleria mellonella gut microbiome

Galleria mellonella gut microbiome Metagenome

Taxonomy:: insect gut metagenome

: Project data type: Metagenome

Scope:: Environment

Brandon University

Accession:: PRJNA552585
ID:: 552585

Select item 51217413.

Integrated Analysis of Chemical and Transcriptome Reveals the Comprehensive Characteristics of Different Medicinal Parts of Angelica sinensis Radix

: Project data type: Raw sequence reads

Scope:: Multispecies

Wuhan Polytechnic University

Accession:: PRJNA512174
ID:: 512174

Select item 48134014.

An extracellular Argonaute protein mediates export of repeat-associated small RNAs into vesicles in parasitic nematodes

: Project data type: Transcriptome or Gene expression

Scope:: Multispecies

Langebio - Cinvestav

Accession:: PRJNA481340
ID:: 481340

Select item 39207915.

Neurospora crassa

Comparative transcriptome of Neurospora crassa strains

Taxonomy:: Neurospora crassa

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Molecular Biology and Genetics of fungi, Genetics, University of São Paulo

Accession:: PRJNA392079
ID:: 392079

Select item 33806016.

Candida albicans

Genome-wide expression profiling of Candida albicans transcription factor Skn7p

Taxonomy:: Candida albicans

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Fungal Biology and Pathogenicity, Mycology Department, Institut Pasteur

Accession:: PRJNA338060
ID:: 338060

Select item 28475717.

Mus musculus

1,25-Dihydroxyvitamin D3 Controls a Cohort of Vitamin D Receptor Target Genes in the Proximal Intestine That Is Enriched for Calcium Regulating Components (ChIP-seq)

Taxonomy:: Mus musculus (house mouse)

: Project data type: Epigenomics

Scope:: Multiisolate

Pike Lab, Biochemistry, University of Wisconsin at Madison

Accession:: PRJNA284757
ID:: 284757

Select item 28475418.

Mus musculus

1,25-Dihydroxyvitamin D3 Controls a Cohort of Vitamin D Receptor Target Genes in the Proximal Intestine That Is Enriched for Calcium Regulating Components (RNA-seq)