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Organizing biological data

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Select item 11495201.

Acinetobacter piscicola p38

Acinetobacter piscicola p38 Genome sequencing

Taxonomy:: Acinetobacter piscicola

: Project data type: Genome sequencing

Scope:: Monoisolate

Shanxi Agricultural University

Accession:: PRJNA1149520
ID:: 1149520

Select item 11493522.

Bos taurus strain:Japanese Black Cow

Bovine granulosa cells and oocytes cultured on plastic plate or Xanthan and Locust Bean Gum gel

Organism:: Bos taurus

Taxonomy:: Bos taurus (domestic cattle)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

NODAI Genome Research Center, Tokyo University of Agriculture

Accession:: PRJDB14229
ID:: 1149352

Select item 11491603.

Evaluating Pulmonary Toxicity of PFOS and its Alternative OBS Using Spheroids of A549 Cells

: Project data type: Raw sequence reads

Scope:: Multispecies

south china normal university

Accession:: PRJNA1149160
ID:: 1149160

Select item 11488344.

Asparagopsis taxiformis dramatically reduces methane emissions in ruminants by affecting rumen microbial composition and inhibiting methyl-coenzyme M activity

: Project data type: Raw sequence reads

Scope:: Multispecies

Guangdong academy of agricultural sciences

Accession:: PRJNA1148834
ID:: 1148834

Select item 11482235.

Suc-treated rice transcriptome sequencing

: Project data type: Raw sequence reads

Scope:: Multispecies

Zhejiang Academy of Agricultural Sciences

Accession:: PRJNA1148223
ID:: 1148223

Select item 11481166.

Colias eurytheme

Colias eurytheme Bab ChIP-seq pupal wings at 40% and 60% development

Taxonomy:: Colias eurytheme (orange sulphur)

: Project data type: Epigenomics

Scope:: Monoisolate

The George Washington University

Accession:: PRJNA1148116
ID:: 1148116

Select item 11478927.

MdSVWC1 regulates the expression of antimicrobial peptide genes in the Musca domestica

: Project data type: Raw sequence reads

Scope:: Multispecies

Hebei University

Accession:: PRJNA1147892
ID:: 1147892

Select item 11475728.

Haemophilus influenzae

Haemophilus influenzae Genome sequencing and assembly

Taxonomy:: Haemophilus influenzae

: Project data type: Genome sequencing and assembly

Scope:: Multiisolate

Hunan Provincial Maternal and Child Health Care Hospital

Accession:: PRJNA1147572
ID:: 1147572

Select item 11472739.

Time-course scRNA-seq of definitive endoderm directed differentiation

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Diabetes Center of Excellence, Program in Molecular Medicine, UMass Medical School

Accession:: PRJNA1147273
ID:: 1147273

Select item 114715910.

Gene expression profile of olive oil- and ozonated olive oil-treated A375 human melanoma cell lines

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Immunology, Graduate School of Pharmaceutical Sciences, Hokkaido university

Accession:: PRJNA1147159
ID:: 1147159

Select item 114715811.

Gene expression profile of olive oil- and ozonated olive oil-treated B16F10 murine melanoma cell lines

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Immunology, Graduate School of Pharmaceutical Sciences, Hokkaido university

Accession:: PRJNA1147158
ID:: 1147158

Select item 114708812.

827

Effect of farrowing pen hygiene (standard vs. optimal) and creep feeding regime (dry pelleted starter diet vs. liquid mixture of milk replacer and starter diet) on post-weaning intestinal parameters and growth to slaughter in pigs

: Project data type: Other

Scope:: Monoisolate

Teagasc

Accession:: PRJEB78943
ID:: 1147088

Select item 114676013.

Time-course transcriptome data in Streptomyces atratus SCSIO ZH16 deltailaR

: Project data type: Raw sequence reads

Scope:: Multispecies

East China University of Science and Technology

Accession:: PRJNA1146760
ID:: 1146760

Select item 114632714.

Recording morphogen signals reveals mechanisms underlying gastruloid symmetry breaking

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Lewis-Sigler Institute, Princeton University

Accession:: PRJNA1146327
ID:: 1146327

Select item 114628615.

RNA-Seq data from N. benthamiana expressing WT and DV mutant of NbRoq1

RNA-Seq data from wild-type N. benthamiana transiently expressing WT and autoactive DV mutant of NbRoq1

: Project data type: Other

Scope:: Monoisolate

The John Innes Centre

Accession:: PRJEB47081
ID:: 1146286

Select item 114628516.

RNA-Seq data from NRC2/3/4 KO N. benthamiana expressing activated NLRs

RNA-Seq data from NRC2/3/4 KO N. benthamiana expressing activated NLRs without cell death due to absence of helper NLRs

: Project data type: Other

Scope:: Monoisolate

The John Innes Centre

Accession:: PRJEB47080
ID:: 1146285

Select item 114628417.

RNA-Seq data from N. benthamiana expressing WT and DV mutant M. polymorpha CNL

RNA-Seq data from N. benthamiana expressing WT and autoactive DV mutant of a CNL from Marchantia polymorpha

: Project data type: Other

Scope:: Monoisolate

The John Innes Centre

Accession:: PRJEB47072
ID:: 1146284

Select item 114588318.

Helicobacter pylori

Helicobacter pylori Genome sequencing and assembly

Taxonomy:: Helicobacter pylori

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

University of Science and Technology of Hanoi (USTH)

Accession:: PRJNA1145883
ID:: 1145883

Select item 114574919.

Phylogenomic Surveillance of Drug Resistant Mycobacterium tuberculosis in Jalisco Mexico

Results showed that L4 sublineages of MTB, such as L4.1.1 (X), L4.1.2 (H) and L4.3 (LAM), were the most prevalent. Furthermore, we found exclusive mutations and gene clusters in a particular virulent sublineage L4.1.1.3 (X3).