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1.

Novel zoonotic cases of Plasmodium simium from Sao Paulo with the first reference genome of the Brazilian strain.

By sequencing P. simium DNA from Brazil using both Oxford Nanopore and Illumina platforms, we assembled the first reference genome (Ps_SaoPaulo; 21.8 Mb).

Project data type: Other
Scope:
Monoisolate
London School of Hygiene and Tropical Medicine
Accession:
PRJEB81719
ID:
1180436
2.
3.

The Application of The Microbiome in Forensic Investigations

Soil microbiome using 16sRNA sequencing

Project data type: Other
Scope:
Monoisolate
UCL
Accession:
PRJEB77421
ID:
1180399
4.

Genomic and ecological insights into phylogeography: the complex history of the widespread herb Carex nigra (Cyperaceae) revisited

Project data type: Raw sequence reads
Scope:
Multispecies
University of Seville
Accession:
PRJNA1179962
ID:
1179962
5.

human metagenome

USE OF A NOVEL PASSIVE E-NOSE TO MONITOR ADHERENCE TO A HIGH SOLUBLE FIBER DIET

Taxonomy:
human metagenome
Project data type: Raw sequence reads
Scope:
Environment
Rush University Medical Center
Accession:
PRJNA1179953
ID:
1179953
6.

A GPR126 single nucleotide polymorphism (rs536714306) is not associated with periodontitis: A study in a Greek cohort

GPR126 SNP rs536714306 association analysis with periodontitis in Greek population

Project data type: Other
Scope:
Monoisolate
National and Kapodistrian University of Athens
Accession:
PRJEB81680
ID:
1179280
7.

Comparison of IL-10 gene promoter polymorphisms and haplotypes between high-grade squamous intraepithelial lesions or cervical cancer and negative cervical cytology

Comparison of IL10 promoter variants between positive and negative cervical cancer

Project data type: Other
Scope:
Monoisolate
Oswaldo Cruz Foundation
Accession:
PRJEB81668
ID:
1179277
8.

Microbial community at low temperature

Microbial ecology in long-term up-flow anaerobic reactor operation treating municipal wastewater at low temperatures and variable loadings

Project data type: Other
Scope:
Monoisolate
Department of Chemistry, Bioscience and Environmental Engineering
Accession:
PRJEB81546
ID:
1179185
9.

scRNAseq_of_the_adult_immun_system

Project data type: Other
Scope:
Monoisolate
Wellcome Sanger Institute
Accession:
PRJEB81425
ID:
1179145
10.

Novel zoonotic cases of Plasmodium simium from Sao Paulo with the first reference genome of the Brazilian strain.

By sequencing P. simium DNA from Brazil using both Oxford Nanopore and Illumina platforms, we assembled the first reference genome (Ps_SaoPaulo; 21.8 Mb).

Project data type: Other
Scope:
Monoisolate
London School of Hygiene and Tropical Medicine
Accession:
PRJEB81302
ID:
1179102
11.

Archaeal 16S rRNA community of protein amended anaerobic marine sediment slurries of the Helgoland mud area

Project data type: Other
Scope:
Monoisolate
German Federation for Biological Data
Accession:
PRJEB80318
ID:
1179032
12.

Effect of fit-for-purpose biochars on rumen fermentation, microbial communities and methane production in cattle

Biochar effects on rumen fermentation and methane emissions

Project data type: Other
Scope:
Monoisolate
csiro agriculture and food
Accession:
PRJEB80312
ID:
1179031
13.

Profiling trace organic chemical biotransformation genes, enzymes and associated bacteria in microbial model communities

Project data type: Other
Scope:
Monoisolate
TECHNICAL UNIVERSITY MUNICH
Accession:
PRJEB74141
ID:
1179008
14.

B.g. f.sp. tritici CHVD042201 genome assembly

A chromosome-scale assembly of the wheat powdery mildew (B.g. f.sp. tritici) isolate CHVD042201

Project data type: Other
Scope:
Monoisolate
UNIVERSITY OF ZURICH
Accession:
PRJEB73510
ID:
1179006
15.

New Insights into the Biosynthetic Mechanism Differences in the Health and Nutritional Functions of Different Fruiting Body Parts of Helvella leucopus

Project data type: Raw sequence reads
Scope:
Multispecies
Kashgar University
Accession:
PRJNA1178727
ID:
1178727
16.

16S rRNA gene amplicon sequencing

Project data type: Raw sequence reads
Scope:
Multispecies
Nanjing Agriculture University
Accession:
PRJNA1178134
ID:
1178134
17.

Rhynchocyon petersi (black and rufous elephant shrew) genome, mRhyPet1, sequence data

Project data type: Raw sequence reads
Scope:
Multispecies
Vertebrate Genomes Project
Accession:
PRJNA1178120
ID:
1178120
18.

Predicting synthetic mRNA stability using massively parallel kinetic measurements, biophysical modeling, and machine learning

Project data type: Raw sequence reads
Scope:
Multispecies
Pennsylvania State University
Accession:
PRJNA1177892
ID:
1177892
19.

Large scale analysis of leaf gene expression upon treatment of apple grafted scions with acibenzolar-S-methyl or water at 20 or 35°C

Organism:
Malus domestica
Taxonomy:
Malus domestica (apple)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Agrocampus Ouest
Accession:
PRJNA1177424
ID:
1177424
20.

Ganoderma lingzhi strain:GL0102

The golden genome annotation of Ganoderma lingzhi reveals a more complex scenario of eukaryotic gene structure and transcription activity

Taxonomy:
Ganoderma lingzhi
Project data type: Genome sequencing and assembly
Scope:
Monoisolate
Guangdong Academy of Sciences
Accession:
PRJNA1177388
ID:
1177388

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