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Accession: PRJNA293225 ID: 293225

Escherichia coli

GenomeTrakr Project: Thakur Molecular Epidemiology Laboratory, NC State University

See Genome Information for Escherichia coli
Whole genome sequencing of cultured E. coli as part of the US Food and Drug Administration surveillance project for the rapid detection of outbreaks of foodborne illnesses.
AccessionPRJNA293225
Data TypeGenome sequencing and assembly
ScopeMultispecies
OrganismEscherichia coli[Taxonomy ID: 562]
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
PublicationsEl Zowalaty ME et al., "Genome sequences of two multidrug-resistant Escherichia coli strains MEZEC8 and MEZEC10 isolated from livestock in South Africa.", J Glob Antimicrob Resist, 2020 Dec;23:445-449
SubmissionRegistration date: 2-Jun-2019
US Food and Drug Administration
Related Resources
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)1658
WGS master1359
SRA Experiments1652
Protein Sequences13512
Publications
PubMed1
Other datasets
BioSample1640
Assembly1359
Assembly details:
Assembly levelNumber of Assemblies
43
1316
1359
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_025667245.1ScaffoldJAOBYC000000000SAMN29270128
NC_Ent1
GCA_025667195.1ContigJAOBYA000000000SAMN28608651
NC_LB-4778
GCA_025667185.1ScaffoldJAOBYB000000000SAMN29270129
NC_Ent2
GCA_025667075.1ScaffoldJAOBXZ000000000SAMN28608652
NC_LB-4782
GCA_025667065.1ScaffoldJAOBXY000000000SAMN29270130
NC_Ent6
GCA_025667025.1ScaffoldJAOBXX000000000SAMN29270131
NC_Ent8
GCA_025667005.1ScaffoldJAOBXW000000000SAMN28608653
NC_LB-5140
GCA_025666965.1ScaffoldJAOBXV000000000SAMN28608654
NC_LB-5143
GCA_025666925.1ScaffoldJAOBXS000000000SAMN29270134
NC_Ent13
GCA_025666845.1ScaffoldJAOBXU000000000SAMN29270132
NC_Ent11
GCA_025666825.1ScaffoldJAOBXQ000000000SAMN29270136
NC_Ent21
GCA_025666805.1ScaffoldJAOBXT000000000SAMN29270133
NC_Ent12
GCA_025666765.1ScaffoldJAOBXR000000000SAMN29270135
NC_Ent16
GCA_025666645.1ContigJAOBXO000000000SAMN28608656
NC_LB-4790
GCA_025666625.1ContigJAOBXL000000000SAMN28608659
NC_LB-5329
GCA_025666615.1ContigJAOBXN000000000SAMN28608657
NC_LB-4803
GCA_025666595.1ContigJAOBXP000000000SAMN28608655
NC_LB-3185
GCA_025666585.1ScaffoldJAOBXM000000000SAMN28608658
NC_LB-5327
GCA_040171145.1ContigABSXSI000000000SAMN41788527
MC041B
GCA_040172165.1ContigABSXUL000000000SAMN41788528
WW159C
GCA_040209805.1ContigABSZDU000000000SAMN41693150
TBXC202
GCA_040252855.1ContigABTAHG000000000SAMN41913058
8bF_EC
GCA_040078615.1ContigABSUDZ000000000SAMN41693155
TBXC262
GCA_040078375.1ContigABSUDJ000000000SAMN41693154
TBXC239
GCA_040078295.1ContigABSUDI000000000SAMN41693152
TBXC220
GCA_040077975.1ContigABSUCQ000000000SAMN41693149
TBXC58B
GCA_040077955.1ContigABSUCR000000000SAMN41693156
TBXC264
GCA_040077935.1ContigABSUCS000000000SAMN41693151
TBXC210B
GCA_040136145.1ContigABSWQV000000000SAMN37517039
TBXC106
GCA_040134825.1ContigABSWOO000000000SAMN37797074
TBXC172C
GCA_040045675.1ContigABSSMV000000000SAMN41658112
NCSU-17-46
GCA_040045495.1ContigABSSMM000000000SAMN41658113
NCSU-17-47
GCA_040045475.1ContigABSSML000000000SAMN41658110
NCSU-17-44
GCA_040045425.1ContigABSSMJ000000000SAMN41658108
NCSU-17-07
GCA_040044315.1ContigABSSKJ000000000SAMN41658111
NCSU-17-45
GCA_040044835.1ContigABSSLL000000000SAMN41658115
NCSU-18-17
GCA_040044815.1ContigABSSLH000000000SAMN41658114
NCSU-18-04
GCA_040044795.1ContigABSSLI000000000SAMN41658109
NCSU-17-10
GCA_040047445.1ContigABSSQC000000000SAMN41658117
NCSU-18-23
GCA_040047425.1ContigABSSQF000000000SAMN41658116
NCSU-18-21
GCA_038031325.1ContigABRQCJ000000000SAMN40897187
TBXC226C
GCA_038031385.1ContigABRQCK000000000SAMN40897178
TBXC275B
GCA_038037345.1ContigABRQNX000000000SAMN40897201
TBXC245
GCA_038037325.1ContigABRQNV000000000SAMN40897181
TBXC281
GCA_038037305.1ContigABRQNT000000000SAMN40897168
TBXC208
GCA_038037285.1ContigABRQNM000000000SAMN40897164
TBXC191
GCA_038037265.1ContigABRQNU000000000SAMN40897177
TBXC274
GCA_038037145.1ContigABRQNF000000000SAMN40897183
TBXC286
GCA_038033405.1ContigABRQDG000000000SAMN40897146
TBXC29
GCA_038035865.1ContigABRQLC000000000SAMN40897147
TBXC046
GCA_038035925.1ContigABRQLE000000000SAMN40897157
TBXC174
GCA_038035905.1ContigABRQLD000000000SAMN40897156
TBXC124
GCA_038036005.1ContigABRQLI000000000SAMN40897170
TBXC216
GCA_038035985.1ContigABRQLH000000000SAMN40897169
TBXC214
GCA_038035965.1ContigABRQLG000000000SAMN40897148
TBXC048
GCA_038035945.1ContigABRQLF000000000SAMN40897160
TBXC180B
GCA_038036025.1ContigABRQLL000000000SAMN40897196
TBXC256
GCA_038036425.1ContigABRQMB000000000SAMN40897173
TBXC263
GCA_038036405.1ContigABRQME000000000SAMN40897172
TBXC233
GCA_038036385.1ContigABRQLY000000000SAMN40897162
TBXC185C
GCA_038036345.1ContigABRQMC000000000SAMN40897171
TBXC221D
GCA_038036325.1ContigABRQLX000000000SAMN40897158
TBXC178
GCA_038036305.1ContigABRQLW000000000SAMN40897159
TBXC179C
GCA_038036845.1ContigABRQMX000000000SAMN40897205
TBXC258
GCA_038036765.1ContigABRQMW000000000SAMN40897197
TBXC252
GCA_038036745.1ContigABRQMS000000000SAMN40897195
TBXC257
GCA_038036725.1ContigABRQMT000000000SAMN40897193
TBXC203
GCA_038036705.1ContigABRQMR000000000SAMN40897192
TBXC232
GCA_038036685.1ContigABRQMQ000000000SAMN40897191
TBXC204
GCA_038036665.1ContigABRQMO000000000SAMN40897190
TBXC209
GCA_038036645.1ContigABRQMN000000000SAMN40897189
TBXC215
GCA_038036625.1ContigABRQMP000000000SAMN40897188
TBXC222
GCA_038036605.1ContigABRQML000000000SAMN40897186
TBXC228B
GCA_038036585.1ContigABRQMK000000000SAMN40897184
TBXC287
GCA_038036545.1ContigABRQMJ000000000SAMN40897182
TBXC282
GCA_038036525.1ContigABRQMH000000000SAMN40897179
TBXC276D
GCA_038036505.1ContigABRQMF000000000SAMN40897180
TBXC280
GCA_038036485.1ContigABRQMD000000000SAMN40897149
TBXC52
GCA_038036465.1ContigABRQMG000000000SAMN40897176
TBXC270
GCA_038036565.1ContigABRQMM000000000SAMN40897185
TBXC288
GCA_038036445.1ContigABRQMI000000000SAMN40897174
TBXC268
GCA_038037065.1ContigABRQNW000000000SAMN40897151
TBXC54
GCA_038037045.1ContigABRQNS000000000SAMN40897166
TBXC196
GCA_038036965.1ContigABRQNI000000000SAMN40897202
TBXC244
GCA_038036945.1ContigABRQNH000000000SAMN40897150
TBXC053
GCA_038036925.1ContigABRQNE000000000SAMN40897167
TBXC197
GCA_038036885.1ContigABRQMZ000000000SAMN40897155
TBXC64
GCA_038036825.1ContigABRQMU000000000SAMN40897200
TBXC246
GCA_038036805.1ContigABRQMY000000000SAMN40897199
TBXC250
GCA_038036785.1ContigABRQMV000000000SAMN40897198
TBXC251
GCA_038037805.1ContigABRQOT000000000SAMN40897204
TBXC238
GCA_038037785.1ContigABRQOQ000000000SAMN40897165
TBXC192
GCA_038037745.1ContigABRQOP000000000SAMN40897161
TBXC184
GCA_038037725.1ContigABRQOS000000000SAMN40897163
TBXC190
GCA_038038285.1ContigABRQPS000000000SAMN40897203
TBXC240
GCA_038038265.1ContigABRQPQ000000000SAMN40897175
TBXC269
GCA_038038465.1ContigABRQQB000000000SAMN40897153
TBXC71
GCA_038038445.1ContigABRQQC000000000SAMN40897152
TBXC065
GCA_038038405.1ContigABRQPW000000000SAMN40897194
TBXC198
GCA_038037905.1ContigABRQOW000000000SAMN40897154
TBXC58
GCA_038430535.1ContigABRWDQ000000000SAMN41055341
NCSU-17-26
GCA_038430485.1ContigABRWDN000000000SAMN41055351
NCSU-18-30
GCA_038430475.1ContigABRWDO000000000SAMN41055336
NCSU-17-12
GCA_038430515.1ContigABRWDP000000000SAMN41055340
NCSU-17-24
GCA_038431285.1ContigABRWEQ000000000SAMN41055353
NCSU-18-32
GCA_038431265.1ContigABRWER000000000SAMN41055343
NCSU-17-33
GCA_038431245.1ContigABRWES000000000SAMN41055360
NCSU-19-03
GCA_038431025.1ContigABRWEE000000000SAMN41055357
NCSU-18-45
GCA_038431035.1ContigABRWEG000000000SAMN41055344
NCSU-17-34
GCA_038430975.1ContigABRWED000000000SAMN41055356
NCSU-18-42
GCA_038430985.1ContigABRWEF000000000SAMN41055359
NCSU-18-48
GCA_038430935.1ContigABRWEA000000000SAMN41055355
NCSU-18-36
GCA_038430905.1ContigABRWDZ000000000SAMN41055352
NCSU-18-31
GCA_038430885.1ContigABRWDY000000000SAMN41055348
NCSU-17-39
GCA_038430865.1ContigABRWEC000000000SAMN41055354
NCSU-18-35
GCA_038430835.1ContigABRWEB000000000SAMN41055350
NCSU-18-27
GCA_038430815.1ContigABRWDX000000000SAMN41055349
NCSU-17-41
GCA_038431475.1ContigABRWFD000000000SAMN41055339
NCSU-17-23
GCA_038431435.1ContigABRWEX000000000SAMN41055345
NCSU-17-35
GCA_038431415.1ContigABRWEW000000000SAMN41055362
NCSU-19-06
GCA_038431395.1ContigABRWET000000000SAMN41055346
NCSU-17-36
GCA_038431375.1ContigABRWEY000000000SAMN41055342
NCSU-17-32
GCA_038431355.1ContigABRWEV000000000SAMN41055361
NCSU-19-04
GCA_038431335.1ContigABRWEU000000000SAMN41055347
NCSU-17-38
GCA_038431605.1ContigABRWFG000000000SAMN41055337
NCSU-17-14
GCA_038431585.1ContigABRWFE000000000SAMN41055338
NCSU-17-17
GCA_038431645.1ContigABRWFF000000000SAMN41055358
NCSU-18-47
GCA_031094205.1ContigABLYFF000000000SAMN37231916
PF8V3-F2_EC
GCA_031094185.1ContigABLYFG000000000SAMN37231917
PF8V3-F3_EC
GCA_031094165.1ContigABLYFB000000000SAMN37231965
LB_5929
GCA_031094145.1ContigABLYFC000000000SAMN37231957
LB_5656
GCA_031094125.1ContigABLYFD000000000SAMN37231913
PF8V2-L4_EC
GCA_031094105.1ContigABLYFA000000000SAMN37231952
CF7V3-L3_EC
GCA_031094085.1ContigABLYEZ000000000SAMN37231951
CF7V3-L2_EC
GCA_031094065.1ContigABLYEY000000000SAMN37231949
CF7V3-F10_EC
GCA_031094045.1ContigABLYEW000000000SAMN37231912
PF8V2-F9_EC
GCA_031094025.1ContigABLYEX000000000SAMN37231918
PF8V3-F4_EC
GCA_031094005.1ContigABLYEV000000000SAMN37231946
CF6V3-L2_EC
GCA_031093985.1ContigABLYET000000000SAMN37231936
CF3V2-F1_EC
GCA_031093965.1ContigABLYEU000000000SAMN37231937
CF3V2-L1_EC
GCA_031093945.1ContigABLYER000000000SAMN37231915
PF8V3-F1_EC
GCA_031093925.1ContigABLYEQ000000000SAMN37231921
PF8V3-F9_EC
GCA_031093905.1ContigABLYEP000000000SAMN37231964
LB_5928
GCA_031093885.1ContigABLYES000000000SAMN37231933
PF10V1-F9_EC
GCA_031093865.1ContigABLYEO000000000SAMN37231914
PF8V2-S2_EC
GCA_031093845.1ContigABLYEM000000000SAMN37231963
LB_5738
GCA_031093825.1ContigABLYEK000000000SAMN37231961
LB_5726
GCA_031093805.1ContigABLYEL000000000SAMN37231962
LB_5727
GCA_031093785.1ContigABLYEN000000000SAMN37231960
LB_5713
GCA_031093765.1ContigABLYEJ000000000SAMN37231959
LB_5712
GCA_031093745.1ContigABLYEH000000000SAMN37231958
LB_5689
GCA_031093725.1ContigABLYEI000000000SAMN37231956
PF8V1-F8_EC
GCA_031093705.1ContigABLYEF000000000SAMN37231954
PF8V1-L3_EC
GCA_031093685.1ContigABLYEG000000000SAMN37231955
PF8V1-F7_EC
GCA_031093665.1ContigABLYEE000000000SAMN37231950
CF7V3-L1_EC
GCA_031093645.1ContigABLYEC000000000SAMN37231953
CF8V1-F1_EC
GCA_031093625.1ContigABLYEB000000000SAMN37231909
PF8V2-F3_EC
GCA_031093605.1ContigABLYED000000000SAMN37231919
PF8V3-F7_EC
GCA_031093585.1ContigABLYDZ000000000SAMN37231908
PF8V2-F2_EC
GCA_031093565.1ContigABLYEA000000000SAMN37231948
CF7V3-F5_EC
GCA_031093545.1ContigABLYDY000000000SAMN37231947
CF7V3-F4_EC
GCA_031093525.1ContigABLYDV000000000SAMN37231944
CF6V3-F4_EC
GCA_031093505.1ContigABLYDX000000000SAMN37231943
CF5V3-L5_EC
GCA_031093485.1ContigABLYDW000000000SAMN37231945
CF6V3-F6_EC
GCA_031093465.1ContigABLYDU000000000SAMN37231942
CF5V3-F2_EC
GCA_031093445.1ContigABLYDS000000000SAMN37231941
CF4V1-L4_EC
GCA_031093425.1ContigABLYDR000000000SAMN37231940
CF4V1-F3_EC
GCA_031093405.1ContigABLYDT000000000SAMN37231939
CF3V3-F9_EC
GCA_031093385.1ContigABLYDQ000000000SAMN37231938
CF3V2-L3_EC
GCA_031093365.1ContigABLYDP000000000SAMN37231911
PF8V2-F7_EC
GCA_031093345.1ContigABLYDO000000000SAMN37231935
PF10V1-L1_EC
GCA_031093325.1ContigABLYDL000000000SAMN37231934
PF10V1-F10_EC
GCA_031093305.1ContigABLYDN000000000SAMN37231932
PF10V1-F7_EC
GCA_031093285.1ContigABLYDK000000000SAMN37231931
PF10V1-F6_EC
GCA_031093265.1ContigABLYDI000000000SAMN37231929
PF10V1-F4_EC
GCA_031093245.1ContigABLYDM000000000SAMN37231930
PF10V1-F5_EC
GCA_031093225.1ContigABLYDJ000000000SAMN37231928
PF10V1-F3_EC
GCA_031093205.1ContigABLYDG000000000SAMN37231910
PF8V2-F4_EC
GCA_031093185.1ContigABLYDB000000000SAMN37231923
PF8V3-L3_EC
GCA_031093165.1ContigABLYDC000000000SAMN37231922
PF8V3-L2_EC
GCA_031093145.1ContigABLYDD000000000SAMN37231924
PF8V3-S1_EC
GCA_031093125.1ContigABLYDH000000000SAMN37231927
PF10V1-F2_EC
GCA_031093105.1ContigABLYDF000000000SAMN37231920
PF8V3-F8_EC
GCA_031093085.1ContigABLYDE000000000SAMN37231926
PF9V3-WW5_EC
GCA_031093065.1ContigABLYDA000000000SAMN37231925
PF8V3-S2_EC
GCA_030894315.1ContigABLQYP000000000SAMN34266195
PF4V1-WW5A_EC
GCA_030894205.1ContigABLQYQ000000000SAMN34266179
PF1V3-F1A_EC
GCA_030894185.1ContigABLQYO000000000SAMN34266176
PF1V1-F5A_EC
GCA_030894125.1ContigABLQYL000000000SAMN34266182
PF4V1-F4A_EC
GCA_030894085.1ContigABLQYK000000000SAMN34266181
PF4V1-F2A_EC
GCA_030894055.1ContigABLQYJ000000000SAMN34266180
PF4V1-F1A_EC
GCA_030894045.1ContigABLQYI000000000SAMN34266200
PF4V3-F9B_EC
GCA_030893985.1ContigABLQYF000000000SAMN34266198
PF4V3-F3A_EC
GCA_030893965.1ContigABLQYD000000000SAMN34266178
PF1V2-F7B_EC
GCA_030893945.1ContigABLQYE000000000SAMN34266196
PF4V2-L1A_EC
GCA_030893925.1ContigABLQYC000000000SAMN34266194
PF4V2-F10A_EC
GCA_030893905.1ContigABLQYA000000000SAMN34266191
PF4V2-F4A_EC
GCA_030893885.1ContigABLQYB000000000SAMN34266192
PF4V2-F5A_EC
GCA_030894025.1ContigABLQYH000000000SAMN34266199
PF4V3-F7A_EC
GCA_030894005.1ContigABLQYG000000000SAMN34266197
PF4V3-F1B_EC
GCA_030893865.1ContigABLQXZ000000000SAMN34266190
PF4V2-F1A_EC
GCA_030893845.1ContigABLQXY000000000SAMN34266189
PF4V2-F3A_EC
GCA_030893825.1ContigABLQXX000000000SAMN34266186
PF4V1-F9A_EC
GCA_030893805.1ContigABLQXW000000000SAMN34266187
PF4V1-L3A_EC
GCA_013071645.2ContigAATQYY000000000SAMN09259738
NC_CF152
GCA_032690325.1ContigABNVFR000000000SAMN35989877
LB_5196
GCA_032690535.1ContigABNVFZ000000000SAMN35989895
LB_5282
GCA_032690485.1ContigABNVFY000000000SAMN35989893
LB_5278
GCA_032690465.1ContigABNVFW000000000SAMN35989891
LB_5238
GCA_032690445.1ContigABNVFX000000000SAMN35989892
LB_5239
GCA_032690425.1ContigABNVFV000000000SAMN35989890
LB_5237
GCA_032690405.1ContigABNVFU000000000SAMN35989888
LB_5234
GCA_032690385.1ContigABNVFT000000000SAMN35989887
LB_5221
GCA_032690365.1ContigABNVFS000000000SAMN35989886
LB_5220
GCA_032690345.1ContigABNVFQ000000000SAMN35989876
LB_5193
GCA_032691045.1ContigABNVGF000000000SAMN35989900
LB_5634
GCA_032691025.1ContigABNVGE000000000SAMN35989899
LB_5632
GCA_032691005.1ContigABNVGD000000000SAMN35989898
LB_5629
GCA_032690985.1ContigABNVGC000000000SAMN35989897
LB_5334
GCA_032690965.1ContigABNVGB000000000SAMN35989896
LB_5299
GCA_032690925.1ContigABNVGA000000000SAMN35989878
LB_5202
GCA_032693465.1ContigABNVHS000000000SAMN35990758
TBXC022
GCA_032691525.1ContigABNVHD000000000SAMN35990765
TBXC036
GCA_032691505.1ContigABNVHC000000000SAMN35990764
TBXC035
GCA_032691485.1ContigABNVHB000000000SAMN35990762
TBXC030C
GCA_032691465.1ContigABNVHA000000000SAMN35990761
TBXC028
GCA_032691445.1ContigABNVGZ000000000SAMN35990760
TBXC024
GCA_032691425.1ContigABNVGY000000000SAMN35990759
TBXC023B
GCA_032691405.1ContigABNVGW000000000SAMN35990749
TBXC004
GCA_032691385.1ContigABNVGX000000000SAMN35990750
TBXC005
GCA_032691305.1ContigABNVGS000000000SAMN35989884
LB_5218
GCA_032691285.1ContigABNVGR000000000SAMN35989883
LB_5217
GCA_032691265.1ContigABNVGP000000000SAMN35989882
LB_5207
GCA_032691245.1ContigABNVGQ000000000SAMN35989881
LB_5206
GCA_032691225.1ContigABNVGO000000000SAMN35989880
LB_5204
GCA_032691205.1ContigABNVGM000000000SAMN35989906
LB_5651
GCA_032691185.1ContigABNVGN000000000SAMN35989907
LB_5654
GCA_032691165.1ContigABNVGL000000000SAMN35989879
LB_5203
GCA_032691145.1ContigABNVGK000000000SAMN35989905
LB_5648
GCA_032691125.1ContigABNVGJ000000000SAMN35989904
LB_5646
GCA_032691105.1ContigABNVGI000000000SAMN35989903
LB_5644
GCA_032691085.1ContigABNVGH000000000SAMN35989902
LB_5642
GCA_032691065.1ContigABNVGG000000000SAMN35989901
LB_5637
GCA_032693405.1ContigABNVHP000000000SAMN35990756
TBXC018
GCA_032693385.1ContigABNVHN000000000SAMN35990755
TBXC016
GCA_032693365.1ContigABNVHQ000000000SAMN35990757
TBXC017B
GCA_032693345.1ContigABNVHO000000000SAMN35990754
TBXC012
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NC_STEC149
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NC_STEC237
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NC_P08-20
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NC_STEC215
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NC_STEC235
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NC_LB-4774
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NC_LB-4804
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NC_LB-4828
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NC_LB-4779
GCA_020262745.1ContigABCVQP000000000SAMN21898602
PF4V2-WW6A_EC
GCA_020260645.1ContigABCVMM000000000SAMN16266494
USEC517
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PF3V2-F2C_EC
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LB_5200
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LB_5598
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LB_5191
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PF1V1-L1A_EC
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USECESBL629
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USECESBL929
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USECESBL1212
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USECESBL955
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USECESBL220
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USECESBL278
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USECESBL129
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USECESBL318
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USECESBL090
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USECESBL081
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PF2V1-S4A_EC
GCA_020236835.1ContigABCUOR000000000SAMN21898596
PF4V1-L1A_EC
GCA_020222695.1ContigABCTQC000000000SAMN21898601
PF4V2-L3A_EC
GCA_020222655.1ContigABCTQE000000000SAMN21898589
PF2V1-F1B_EC
GCA_020222775.1ContigABCTQH000000000SAMN21898585
PF1V1-F7A_EC
GCA_020229315.1ContigABCUBD000000000SAMN21898595
PF4V1-F3C_EC
GCA_020229355.1ContigABCUBB000000000SAMN21898587
PF1V2-F8B_EC
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PF3V2-S5A_EC
GCA_021465425.1ContigABEQJP000000000SAMN24961942
PF4V1-F6A_EC
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PF4V1-WF1A_EC
GCA_021465385.1ContigABEQJV000000000SAMN24961945
PF4V2-F6A_EC
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PF4V1-L2B_EC
GCA_021465345.1ContigABEQJR000000000SAMN24961941
PF3V1-F3A_EC
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PF2V2-S2B_EC
GCA_021465305.1ContigABEQEH000000000SAMN24961939
PF2V2-F1A_EC
GCA_021465285.1ContigABEQEG000000000SAMN24961938
PF1V1-S4A_EC
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NC_STEC203
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NC_STEC160
GCA_014347595.1ContigAAVQAB000000000SAMN06645935
NC_STEC206
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NC_STEC157
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NC_STEC204
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NC_STEC177
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NC_STEC178
GCA_014347335.1ContigAAVQAV000000000SAMN06645885
NC_STEC168
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NC_STEC172
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NC_P20-09
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NC_C18-16
GCA_014347245.1ContigAAVQAL000000000SAMN06645886
NC_STEC167
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NC_P19-13
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NC_STEC211
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NC_STEC164
GCA_014345755.1ContigAAVPWT000000000SAMN12822672
MA_121
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NHA044
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USEC894
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USEC981
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USEC1029
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USEC415
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USEC297
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USEC142
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USEC179
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USEC799
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USEC780
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USEC050
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USEC857
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USEC021
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USEC024
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USEC523
GCA_015079155.1ContigAAWTSF000000000SAMN16266496
USEC587
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USEC500
GCA_015079125.1ContigAAWTSB000000000SAMN16266492
USEC468
GCA_015284105.1ContigAAXCPA000000000SAMN16663551
NHA079
GCA_015284085.1ContigAAXCOU000000000SAMN16663540
NHA067
GCA_015284045.1ContigAAXCOR000000000SAMN16663541
NHA068
GCA_015284025.1ContigAAXCOQ000000000SAMN16663534
NHA061
GCA_015284005.1ContigAAXCOV000000000SAMN16663538
NHA065
GCA_015283985.1ContigAAXCOS000000000SAMN16663537
NHA064
GCA_015283965.1ContigAAXCON000000000SAMN16663528
NHA055
GCA_015283925.1ContigAAXCOP000000000SAMN16663527
NHA054
GCA_015283945.1ContigAAXCOL000000000SAMN16663533
NHA060
GCA_015283895.1ContigAAXCOM000000000SAMN16663525
NHA052
GCA_015283865.1ContigAAXCOO000000000SAMN16663526
NHA053
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NHA090
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NHA088
GCA_015283825.1ContigAAXCOK000000000SAMN16663514
NHA041
GCA_015283785.1ContigAAXCOI000000000SAMN16663524
NHA051
GCA_015283765.1ContigAAXCOJ000000000SAMN16663515
NHA042
GCA_015283745.1ContigAAXCOD000000000SAMN16663559
NHA087
GCA_015283725.1ContigAAXCOA000000000SAMN16663579
NHA107
GCA_015283675.1ContigAAXCOG000000000SAMN16663561
NHA089
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NHA108
GCA_015283645.1ContigAAXCOC000000000SAMN16663558
NHA086
GCA_015283625.1ContigAAXCOE000000000SAMN16663556
NHA084
GCA_015283605.1ContigAAXCNQ000000000SAMN16663566
NHA094
GCA_015283585.1ContigAAXCNW000000000SAMN16663577
NHA105
GCA_015283545.1ContigAAXCNU000000000SAMN16663565
NHA093
GCA_015283565.1ContigAAXCNZ000000000SAMN16663578
NHA106
GCA_015283525.1ContigAAXCNN000000000SAMN16663563
NHA091
GCA_015284285.1ContigAAXCPM000000000SAMN16663535
NHA062
GCA_015284265.1ContigAAXCPB000000000SAMN16663519
NHA046
GCA_015284245.1ContigAAXCPI000000000SAMN16663529
NHA056
GCA_015284205.1ContigAAXCOT000000000SAMN16663546
NHA073
GCA_015284215.1ContigAAXCPD000000000SAMN16663520
NHA047
GCA_015284165.1ContigAAXCPC000000000SAMN16663552
NHA080
GCA_015284145.1ContigAAXCPE000000000SAMN16663518
NHA045
GCA_015284325.1ContigAAXCPN000000000SAMN16663536
NHA063
GCA_015283425.1ContigAAXCNP000000000SAMN16663554
NHA082
GCA_015283385.1ContigAAXCNO000000000SAMN16663564
NHA092
GCA_015283365.1ContigAAXCNM000000000SAMN16663553
NHA081
GCA_015283285.1ContigAAXCNR000000000SAMN16663571
NHA099
GCA_015283265.1ContigAAXCNT000000000SAMN16663555
NHA083
GCA_015283245.1ContigAAXCNF000000000SAMN16663572
NHA100
GCA_015283225.1ContigAAXCNX000000000SAMN16663576
NHA104
GCA_015283185.1ContigAAXCNY000000000SAMN16663573
NHA101
GCA_015283145.1ContigAAXCNS000000000SAMN16663570
NHA098
GCA_015283065.1ContigAAXCPL000000000SAMN16663532
NHA059
GCA_015283075.1ContigAAXCPO000000000SAMN16663522
NHA049
GCA_015283025.1ContigAAXCNV000000000SAMN16663574
NHA102
GCA_015285285.1ContigAAXCQZ000000000SAMN16663496
NHA023
GCA_015285305.1ContigAAXCRA000000000SAMN16663498
NHA025
GCA_015285265.1ContigAAXCQY000000000SAMN16663499
NHA026
GCA_015285245.1ContigAAXCRC000000000SAMN16663500
NHA027
GCA_015285205.1ContigAAXCQT000000000SAMN16663491
NHA018
GCA_015285225.1ContigAAXCQU000000000SAMN16663493
NHA020
GCA_015285185.1ContigAAXCRB000000000SAMN16663497
NHA024
GCA_015285155.1ContigAAXCQS000000000SAMN16663490
NHA017
GCA_015285125.1ContigAAXCQX000000000SAMN16663494
NHA021
GCA_015285105.1ContigAAXCQV000000000SAMN16663476
NHA003
GCA_015285085.1ContigAAXCQQ000000000SAMN16663487
NHA014
GCA_015285045.1ContigAAXCQO000000000SAMN16663486
NHA013
GCA_015285005.1ContigAAXCQR000000000SAMN16663489
NHA016
GCA_015284595.1ContigAAXCQA000000000SAMN16663543
NHA070
GCA_015284515.1ContigAAXCOY000000000SAMN16663547
NHA074
GCA_015284495.1ContigAAXCOZ000000000SAMN16663545
NHA072
GCA_015284385.1ContigAAXCPJ000000000SAMN16663516
NHA043
GCA_015284365.1ContigAAXCPK000000000SAMN16663521
NHA048
GCA_015285965.1ContigAAXCQP000000000SAMN16663488
NHA015
GCA_015285945.1ContigAAXCRY000000000SAMN16663474
NHA001
GCA_015285885.1ContigAAXCRQ000000000SAMN16663478
NHA005
GCA_015285905.1ContigAAXCRV000000000SAMN16663475
NHA002
GCA_015285855.1ContigAAXCRU000000000SAMN16663481
NHA008
GCA_015285835.1ContigAAXCRW000000000SAMN16663483
NHA010
GCA_015285805.1ContigAAXCRK000000000SAMN16663509
NHA036
GCA_015285785.1ContigAAXCRP000000000SAMN16663512
NHA039
GCA_015285765.1ContigAAXCRT000000000SAMN16663480
NHA007
GCA_015285745.1ContigAAXCRR000000000SAMN16663479
NHA006
GCA_015285725.1ContigAAXCRN000000000SAMN16663510
NHA037
GCA_015285705.1ContigAAXCRS000000000SAMN16663513
NHA040
GCA_015285685.1ContigAAXCRI000000000SAMN16663508
NHA035
GCA_015285665.1ContigAAXCRO000000000SAMN16663511
NHA038
GCA_015285625.1ContigAAXCRM000000000SAMN16663506
NHA033
GCA_015285465.1ContigAAXCRG000000000SAMN16663504
NHA031
GCA_015285455.1ContigAAXCRJ000000000SAMN16663507
NHA034
GCA_015285435.1ContigAAXCRL000000000SAMN16663505
NHA032
GCA_015285405.1ContigAAXCRE000000000SAMN16663502
NHA029
GCA_015285385.1ContigAAXCRH000000000SAMN16663477
NHA004
GCA_015285365.1ContigAAXCRD000000000SAMN16663501
NHA028
GCA_015285345.1ContigAAXCQW000000000SAMN16663495
NHA022
GCA_015285325.1ContigAAXCRF000000000SAMN16663503
NHA030
GCA_015339825.1ContigAAXEUZ000000000SAMN06848989
NC_P17-17
GCA_015325385.1ContigAAXDXD000000000SAMN13087315
MA_233
GCA_015338625.1ContigAAXETB000000000SAMN06645739
NC_STEC56
GCA_015328525.1ContigAAXEAL000000000SAMN12056374
US_ESBL132
GCA_014985305.1ContigAAWRAS000000000SAMN16422571
NCCPS_166
GCA_014985065.1ContigAAWRAU000000000SAMN16422567
NCCPS_162
GCA_014985045.1ContigAAWRAR000000000SAMN16422553
NCCPS_148
GCA_014985145.1ContigAAWRAZ000000000SAMN16422561
NCCPS_156
GCA_014985105.1ContigAAWRAX000000000SAMN16422558
NCCPS_153
GCA_014985125.1ContigAAWRAV000000000SAMN16422574
NCCPS_169
GCA_014966175.1ContigAAWQWS000000000SAMN16422564
NCCPS_159
GCA_014936145.1ContigAAWRCD000000000SAMN16422565
NCCPS_160
GCA_014936125.1ContigAAWRBY000000000SAMN16422573
NCCPS_168
GCA_014941705.1ContigAAWRCN000000000SAMN16422575
NCCPS_170
GCA_014966295.1ContigAAWQWT000000000SAMN16422570
NCCPS_165
GCA_014966235.1ContigAAWQWQ000000000SAMN16422554
NCCPS_149
GCA_014966335.1ContigAAWQWU000000000SAMN16422562
NCCPS_157
GCA_014966115.1ContigAAWQWV000000000SAMN16422572
NCCPS_167
GCA_014940405.1ContigAAWQNI000000000SAMN16422555
NCCPS_150
GCA_014939925.1ContigAAWQNA000000000SAMN16422557
NCCPS_152
GCA_014940005.1ContigAAWQNK000000000SAMN16422560
NCCPS_155
GCA_014941945.1ContigAAWRCQ000000000SAMN16422566
NCCPS_161
GCA_014967505.1ContigAAWQZU000000000SAMN16422568
NCCPS_163
GCA_014967485.1ContigAAWQZW000000000SAMN16422556
NCCPS_151
GCA_014975265.1ContigAAWRAT000000000SAMN16422563
NCCPS_158
GCA_014975365.1ContigAAWRAY000000000SAMN16422559
NCCPS_154
GCA_014892015.1ContigAAWLMU000000000SAMN16422302
NCCPS_109
GCA_014891955.1ContigAAWLMR000000000SAMN16422291
NCCPS_97
GCA_014891735.1ContigAAWLMQ000000000SAMN16422308
NCCPS_115
GCA_014891715.1ContigAAWLMS000000000SAMN16422287
NCCPS_93
GCA_014891855.1ContigAAWLNG000000000SAMN16422167
NCCPS_90
GCA_014891665.1ContigAAWLND000000000SAMN16422148
NCCPS_71
GCA_014891655.1ContigAAWLNC000000000SAMN16422164
NCCPS_87
GCA_014891635.1ContigAAWLNE000000000SAMN16422165
NCCPS_88
GCA_014891615.1ContigAAWLMV000000000SAMN16422289
NCCPS_95
GCA_014891595.1ContigAAWLNF000000000SAMN16422147
NCCPS_70
GCA_014891575.1ContigAAWLMZ000000000SAMN16422306
NCCPS_113
GCA_014891555.1ContigAAWLMY000000000SAMN16422145
NCCPS_68
GCA_014891535.1ContigAAWLNA000000000SAMN16422163
NCCPS_86
GCA_014891515.1ContigAAWLNB000000000SAMN16422309
NCCPS_116
GCA_014891475.1ContigAAWLMW000000000SAMN16422303
NCCPS_110
GCA_014891455.1ContigAAWLMX000000000SAMN16422305
NCCPS_112
GCA_014891815.1ContigAAWLMO000000000SAMN16422307
NCCPS_114
GCA_014891795.1ContigAAWLNI000000000SAMN16422168
NCCPS_91
GCA_014891435.1ContigAAWLMT000000000SAMN16422301
NCCPS_107
GCA_014890015.1ContigAAWLKE000000000SAMN16422456
NCCPS_121
GCA_014890035.1ContigAAWLKA000000000SAMN16422454
NCCPS_119
GCA_014889955.1ContigAAWLKB000000000SAMN16422472
NC_CPS 144
GCA_014889915.1ContigAAWLKD000000000SAMN16422468
NC_CPS 136
GCA_014889935.1ContigAAWLKC000000000SAMN16422455
NCCPS_120
GCA_014889795.1ContigAAWLJX000000000SAMN16422464
NC_CPS 132
GCA_014889335.1ContigAAWLIX000000000SAMN16422474
NC_CPS 146
GCA_014889295.1ContigAAWLJI000000000SAMN16422463
NCCPS_131
GCA_014889275.1ContigAAWLIU000000000SAMN16422465
NC_CPS 133
GCA_014889255.1ContigAAWLIV000000000SAMN16422475
NC_CPS 147
GCA_014889225.1ContigAAWLJC000000000SAMN16422459
NCCPS_124
GCA_014889215.1ContigAAWLJF000000000SAMN16422462
NCCPS_129
GCA_014889195.1ContigAAWLIW000000000SAMN16422467
NC_CPS 135
GCA_014889175.1ContigAAWLJH000000000SAMN16422461
NCCPS_126
GCA_014889155.1ContigAAWLJD000000000SAMN16422452
NCCPS_117
GCA_014889135.1ContigAAWLJG000000000SAMN16422453
NCCPS_118
GCA_014889095.1ContigAAWLJA000000000SAMN16422470
NC_CPS 138
GCA_014889075.1ContigAAWLIY000000000SAMN16422469
NC_CPS 137
GCA_014889055.1ContigAAWLJB000000000SAMN16422457
NCCPS_122
GCA_014888895.1ContigAAWLIP000000000SAMN16422471
NC_CPS 139
GCA_014888935.1ContigAAWLIN000000000SAMN16422458
NCCPS_123
GCA_014889375.1ContigAAWLJE000000000SAMN16422460
NCCPS_125
GCA_014888795.1ContigAAWLII000000000SAMN16422473
NC_CPS 145
GCA_014912265.1ContigAAWLZO000000000SAMN16422151
NCCPS_74
GCA_014912245.1ContigAAWLZJ000000000SAMN16422162
NCCPS_85
GCA_014912225.1ContigAAWLZG000000000SAMN16422149
NCCPS_72
GCA_014912205.1ContigAAWLZM000000000SAMN16422153
NCCPS_76
GCA_014912185.1ContigAAWLZL000000000SAMN16422152
NCCPS_75
GCA_014912525.1ContigAAWMAJ000000000SAMN16403707
NCCPS_66
GCA_014912545.1ContigAAWMAF000000000SAMN16403704
NCCPS_63
GCA_014912085.1ContigAAWLZD000000000SAMN16422155
NCCPS_78
GCA_014912065.1ContigAAWLZC000000000SAMN16422295
NCCPS_101
GCA_014911985.1ContigAAWLZE000000000SAMN16422146
NCCPS_69
GCA_014911965.1ContigAAWLZI000000000SAMN16422157
NCCPS_80
GCA_014913105.1ContigAAWMAL000000000SAMN16403690
NCCPS_49
GCA_014913205.1ContigAAWLZW000000000SAMN16403695
NCCPS_54
GCA_014913145.1ContigAAWLZV000000000SAMN16403686
NCCPS_45
GCA_014912985.1ContigAAWLZU000000000SAMN16403685
NCCPS_44
GCA_014912965.1ContigAAWMAC000000000SAMN16403702
NCCPS_61
GCA_014912945.1ContigAAWLZX000000000SAMN16403697
NCCPS_56
GCA_014912905.1ContigAAWMAE000000000SAMN16403703
NCCPS_62
GCA_014912885.1ContigAAWLZP000000000SAMN16422154
NCCPS_77
GCA_014912865.1ContigAAWMAK000000000SAMN16403708
NCCPS_67
GCA_014912805.1ContigAAWMAH000000000SAMN16403705
NCCPS_64
GCA_014912745.1ContigAAWMAM000000000SAMN16403688
NCCPS_47
GCA_014912625.1ContigAAWMAS000000000SAMN16403691
NCCPS_50
GCA_014912665.1ContigAAWMAN000000000SAMN16403689
NCCPS_48
GCA_014912585.1ContigAAWMAA000000000SAMN16403700
NCCPS_59
GCA_014912645.1ContigAAWLZY000000000SAMN16403696
NCCPS_55
GCA_014912505.1ContigAAWMAB000000000SAMN16403699
NCCPS_58
GCA_014912485.1ContigAAWLZZ000000000SAMN16403698
NCCPS_57
GCA_014912425.1ContigAAWMAG000000000SAMN16403687
NCCPS_46
GCA_014912345.1ContigAAWLZK000000000SAMN16422166
NCCPS_89
GCA_014912285.1ContigAAWLZH000000000SAMN16422161
NCCPS_84
GCA_014912365.1ContigAAWLZF000000000SAMN16422156
NCCPS_79
GCA_014912325.1ContigAAWLZN000000000SAMN16422150
NCCPS_73
GCA_014913285.1ContigAAWMAR000000000SAMN16403694
NCCPS_53
GCA_014913265.1ContigAAWMAD000000000SAMN16403701
NCCPS_60
GCA_014913245.1ContigAAWMAP000000000SAMN16403692
NCCPS_51
GCA_014913225.1ContigAAWMAQ000000000SAMN16403693
NCCPS_52
GCA_014913985.1ContigAAWLZA000000000SAMN16422288
NCCPS_94
GCA_014914015.1ContigAAWLYY000000000SAMN16422290
NCCPS_96
GCA_014913965.1ContigAAWMAI000000000SAMN16403706
NCCPS_65
GCA_014911565.1ContigAAWLYV000000000SAMN16422297
NCCPS_103
GCA_014911865.1ContigAAWLYZ000000000SAMN16422299
NCCPS_105
GCA_014911405.1ContigAAWLZB000000000SAMN16422293
NCCPS_99
GCA_014911285.1ContigAAWLYX000000000SAMN16422300
NCCPS_106
GCA_014911265.1ContigAAWLYW000000000SAMN16422292
NCCPS_98
GCA_014744455.1ContigAAWHZG000000000SAMN15668967
NC_CPS23
GCA_014744435.1ContigAAWHZE000000000SAMN15668985
NC_CPS41
GCA_014744415.1ContigAAWHZF000000000SAMN15668980
NC_CPS36
GCA_014744395.1ContigAAWHZB000000000SAMN15668966
NC_CPS22
GCA_014744355.1ContigAAWHZA000000000SAMN15668978
NC_CPS34
GCA_014744375.1ContigAAWHZD000000000SAMN15668984
NC_CPS40
GCA_014744335.1ContigAAWHYV000000000SAMN15668975
NC_CPS31
GCA_014744315.1ContigAAWHZC000000000SAMN15668979
NC_CPS35
GCA_014744295.1ContigAAWHYZ000000000SAMN15668977
NC_CPS33
GCA_014744275.1ContigAAWHYS000000000SAMN15668965
NC_CPS21
GCA_014744255.1ContigAAWHYX000000000SAMN15668974
NC_CPS30
GCA_014744235.1ContigAAWHYY000000000SAMN15668976
NC_CPS32
GCA_014744215.1ContigAAWHYU000000000SAMN15668964
NC_CPS20
GCA_014745295.1ContigAAWHZM000000000SAMN15668972
NC_CPS28
GCA_014745275.1ContigAAWHZK000000000SAMN15668971
NC_CPS27
GCA_014741375.1ContigAAWHRZ000000000SAMN16260365
USECESBL470
GCA_014741335.1ContigAAWHRO000000000SAMN16260375
USECESBL1228
GCA_014741355.1ContigAAWHSE000000000SAMN16260369
USECESBL1075
GCA_014741315.1ContigAAWHSB000000000SAMN16260384
USECESBL1340
GCA_014741295.1ContigAAWHSF000000000SAMN16260370
USECESBL1077
GCA_014741275.1ContigAAWHRX000000000SAMN16260380
USECESBL1280
GCA_014741255.1ContigAAWHSD000000000SAMN16260367
USECESBL678
GCA_014741235.1ContigAAWHRV000000000SAMN16260378
USECESBL1248
GCA_014741215.1ContigAAWHRN000000000SAMN16260372
USECESBL1145
GCA_014740995.1ContigAAWHRL000000000SAMN16260362
USECESBL042
GCA_014740975.1ContigAAWHRM000000000SAMN16260363
USECESBL203
GCA_014740555.1ContigAAWHRS000000000SAMN16260377
USECESBL1240
GCA_014740535.1ContigAAWHRU000000000SAMN16260379
USECESBL1256
GCA_014740515.1ContigAAWHRT000000000SAMN16260376
USECESBL1237
GCA_014740495.1ContigAAWHSA000000000SAMN16260381
USECESBL1310
GCA_014741435.1ContigAAWHSG000000000SAMN16260371
USECESBL1142
GCA_014741415.1ContigAAWHSC000000000SAMN16260368
USECESBL819
GCA_014740435.1ContigAAWHRR000000000SAMN16260374
USECESBL1222
GCA_014740395.1ContigAAWHRY000000000SAMN16260382
USECESBL1319
GCA_014740375.1ContigAAWHRQ000000000SAMN16260373
USECESBL1178
GCA_014745245.1ContigAAWHZJ000000000SAMN15668969
NC_CPS25
GCA_014745215.1ContigAAWHZI000000000SAMN15668987
NC_CPS43
GCA_014745195.1ContigAAWHZH000000000SAMN15668986
NC_CPS42
GCA_014745155.1ContigAAWHZL000000000SAMN15668973
NC_CPS29
GCA_014765005.1ContigAAWIUF000000000SAMN16260675
USECESBL1360
GCA_014765715.1ContigAAWIUG000000000SAMN16260674
USECESBL1351
GCA_014765735.1ContigAAWIUK000000000SAMN16260679
USECESBL1414
GCA_014765855.1ContigAAWIUN000000000SAMN16260680
USECESBL1417
GCA_014765785.1ContigAAWIUJ000000000SAMN16260678
USECESBL1390
GCA_014765275.1ContigAAWIUB000000000SAMN16260673
USECESBL1349
GCA_014766295.1ContigAAWIUC000000000SAMN16260671
USECESBL1344
GCA_014766275.1ContigAAWIUH000000000SAMN16260672
USECESBL1346
GCA_014766235.1ContigAAWIUI000000000SAMN16260676
USECESBL1372
SRA Data Details
ParameterValue
Data volume, Gbases732
Data volume, Tbytes0.40

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