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Organizing biological data
Novel zoonotic cases of Plasmodium simium from Sao Paulo with the first reference genome of the Brazilian strain.
By sequencing P. simium DNA from Brazil using both Oxford Nanopore and Illumina platforms, we assembled the first reference genome (Ps_SaoPaulo; 21.8 Mb).
CIRCLES-POULTRY
Impact of Nutritional Interventions on Chicken Gut Microbiome
Larotrectinib for NTRK- fusion-positive Glioblastoma (GBM): tracing in parallel the salivary and gut microbiota profiles to assist targeted anticancer treatment in a case study
Salivary and Gut Microbiota Profiles Upon Larotrectinib for NTRK- fusion-positive Glioblastoma
CIRCLES-PIG
Impact of Diverse Farming Conditions and Nutritional Interventions on Swine Gut Microbiota
Uncommon_potential_pathogens
Discovering putative pathogens in animals
Hybrid sequencing of Chromosome and Plasmids from Multidrug Resistant Escherichia coli from Cambodia: Are Megaplasmids driving antibiotic resistance genes?
Hybrid sequencing of ESBL and carbapenemase-producing E. coli isolated from patients in Cambodia
Escherichia coli str. K-12 substr. MDS42
Genomic DNA of gene-deficient strains of E. coli after evolutionary experiments against antibiotics.
human metagenome
USE OF A NOVEL PASSIVE E-NOSE TO MONITOR ADHERENCE TO A HIGH SOLUBLE FIBER DIET
Increasing Prevalence of Artemisinin-Resistant HRP2-Negative Malaria in Eritrea
AKN
Oxygen-dependent dynamics of metformin dissipation at the sediment-water interface and their effects on prokaryotic communities
E. muscae Drosophila RNAseq samples
Mixed culture cathodic xylose electro-fermentation for VFAs production
Salmonella Pathogenicity Island 1 undergoes decay in serovars adapted to swine and poultry
Cluster of Salmonella Napoli in a dairy cattle farm in Piacenza (North Italy)
Investigation of E. coli protection mechanisms against phage infections
scRNAseq_of_the_adult_immun_system
Metagenomic insights into the faecal microbiota of roe deer in Western Pomerania
A new molecular marker for phylogenetic studies in insects including parts of conservative histone H3 and H4 genes and spacer between them, as exemplified with Odonata
A.V. Mglinets, V.S. Bulgakova, O.E. Kosterin
Wastewater-Based Genomic Surveillance key to population-level monitoring of AmpC/ESBL-Producing Escherichia coli
AmpC/ESBL-E.coli Wastewater Finland
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