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BioProject

Organizing biological data

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The following terms were not found in BioProject: opop, variantop.

Select item 10648691.

Phytochrome C and Low Temperature Promote the Expression and Red Light Signaling of Phytochrome D

Organism:: Arabidopsis thaliana

Taxonomy:: Arabidopsis thaliana (thale cress)

: Project data type: Epigenomics

Scope:: Multiisolate

Balázs Papp Laboratory, Institute of Biochemistry, Biological Research Centre

Accession:: PRJNA1064869
ID:: 1064869

Select item 10636952.

Phytochrome C And Low Temperature Promote The Expression And Red Light Signaling Of Phytochrome D

Organism:: Arabidopsis thaliana

Taxonomy:: Arabidopsis thaliana (thale cress)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Balázs Papp Laboratory, Institute of Biochemistry, Biological Research Centre

Accession:: PRJNA1063695
ID:: 1063695

Select item 9805523.

The Sequence Basis for Selectivity of Ephrin-B2 for Eph Receptors and Pathogenic Henipavirus G Glycoproteins [EFNB2 DEEP MUTAGENESIS]

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Other

Scope:: Multiisolate

Biochemistry, University of Illinois, Urbana-Champaign

Accession:: PRJNA980552
ID:: 980552

Select item 9805514.

The Sequence Basis for Selectivity of Ephrin-B2 for Eph Receptors and Pathogenic Henipavirus G Glycoproteins [EFNB2-D62Q DEEP MUTAGENESIS]

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Other

Scope:: Multiisolate

Biochemistry, University of Illinois, Urbana-Champaign

Accession:: PRJNA980551
ID:: 980551

Select item 9379855.

LINE-1 methylation as survival predictive factor in patients with stage III-IV oropharyngeal squamous cell carcinoma

: Project data type: Other

Scope:: Monoisolate

European Bioinformatics Institute

Accession:: PRJEB55179
ID:: 937985

Select item 9046996.

Signals from the reproductive system regulate somatic regeneration and vertebrate lifespan

Organism:: Nothobranchius furzeri

Taxonomy:: Nothobranchius furzeri (turquoise killifish)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Harel, Genetics, The Hebrew University of Jerusalem

Accession:: PRJNA904699
ID:: 904699

Select item 8108657.

Cell division drives DNA methylation loss in late-replicating domains in primary human cells [methylation array]

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Epigenomics

Scope:: Multiisolate

Peter W Laird, Epigenetics, Van Andel Institute

Accession:: PRJNA810865
ID:: 810865

Select item 7244428.

A phased genome assembly for allele-specific analysis in Trypanosoma brucei

: Project data type: Other

Scope:: Monoisolate

Department of Veterinary Sciences, Ludwig-Maximilians-Universitat Munchen

Accession:: PRJEB43606
ID:: 724442

Select item 6331639.

Prognosis prediction model for Alzheimer’s disease conversion from mild cognitive impairment by integrative analysis of multi-omics data

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

National Center for Geriatrics and Gerontology

Accession:: PRJNA633163
ID:: 633163

Select item 61329710.

The sequence of human ACE2 is suboptimal for binding the S spike protein of SARS coronavirus 2

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Other

Scope:: Multiisolate

RAL 318G, Biochemistry, University of Illinois

Accession:: PRJNA613297
ID:: 613297

Select item 57496511.

Engineered receptors for human cytomegalovirus that are orthogonal to normal human biology

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Other

Scope:: Multiisolate

RAL 318G, Biochemistry, University of Illinois

Accession:: PRJNA574965
ID:: 574965

Select item 55413012.

Transcriptome-wide gene expression analysis of prostate cancer (PCa) tissue specimen I

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Kristin Reiche, Fraunhofer Institute for Cell Therapy and Immunology

Accession:: PRJNA554130
ID:: 554130

Select item 55412513.

Transcriptome-wide gene expression analysis of prostate cancer (PCa) tissue specimen on a custom expression microarray

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Kristin Reiche, Fraunhofer Institute for Cell Therapy and Immunology

Accession:: PRJNA554125
ID:: 554125

Select item 55206214.

Reduction of alternative electron acceptors drives biofilm formation in Shewanella algae

Taxonomy:: Shewanella algae

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Dept. Microbiology, University of La Laguna

Accession:: PRJNA552062
ID:: 552062

Select item 54238115.

Circular RNA expression profiling and selection of key circular RNAs in the hypothalamus of heat-acclimated rats

Organism:: Rattus norvegicus

Taxonomy:: Rattus norvegicus (Norway rat)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Human factors and ergonomics, Academy of Military Medical Sciences, Academy of Military Medical Sciences, Institute of Environmental and Operational Medicine

Accession:: PRJNA542381
ID:: 542381

Select item 51670316.

Subtle changes in chromatin loop contact propensity are associated with differential gene regulation and expression

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Other

Scope:: Multiisolate

Frazer, Pediatrics, UC San Diego

Accession:: PRJNA516703
ID:: 516703

Select item 45486117.

Gene expression profile of Huh7 cells with long and short telomeres

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Seoul National University

Accession:: PRJNA454861
ID:: 454861

Select item 38759418.

Clostridium perfringens

Large-scale differences in gene expression, including genes encoding type IV pili-associated proteins, are seen when Clostridium perfringens is grown in liquid or on surfaces

Taxonomy:: Clostridium perfringens

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Biological Sciences, Virginia Tech

Accession:: PRJNA387594
ID:: 387594

Select item 38725919.

Impact of bio-based residue amendments on soil functioning.

Effects of bio-based residue amendments on greenhouse gas emission from agricultural soil are stronger than effects of soil type with different microbial community composition.