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Select item 11332591.

Mesocricetus auratus

Transcriptome profiling of lungs of hamsters infected with various SARS-CoV-2 variants

Taxonomy:: Mesocricetus auratus (golden hamster)

: Project data type: Transcriptome or Gene expression

Scope:: Monoisolate

The Sato Lab Division of Systems Virology Department of Microbiology and Immunology, The Institute of Medical Science, The University of Tokyo

Accession:: PRJDB14143
ID:: 1133259

Select item 10979442.

RNA-seq in imprinted vs naive Omicron-positive volunteers

: Project data type: Other

Scope:: Monoisolate

Sissy T Sonnleitner

Accession:: PRJEB74628
ID:: 1097944

Select item 10743943.

AS03 adjuvant enhances the magnitude, persistence, and clonal breadth of memory B cell responses to a plant-based COVID-19 vaccine in humans

: Project data type: Raw sequence reads

Scope:: Multispecies

Stanford University

Accession:: PRJNA1074394
ID:: 1074394

Select item 10465394.

Host immune responses associated with SARS-CoV-2 Omicron infection result in protection or pathology during reinfection depending on mouse genetic background

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Sanford Burnham Prebys Medical Discovery Institute

Accession:: PRJNA1046539
ID:: 1046539

Select item 10306205.

An In-Depth Analysis of the Pathogenicity of the SARS-CoV-2 Delta and Omicron Variants in Golden Syrian Hamsters

: Project data type: Other

Scope:: Monoisolate

MRC-University of Glasgow Centre for Virus Research

Accession:: PRJEB55782
ID:: 1030620

Select item 10270926.

Mucosal Boosting Enhances Vaccine Protection Against SARS-CoV-2 in Rhesus Macaques

Organism:: Macaca mulatta

Taxonomy:: Macaca mulatta (Rhesus monkey)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Barouch Lab, CVVR, BIDMC

Accession:: PRJNA1027092
ID:: 1027092

Select item 10144847.

Determinants of de novo B cell responses to drifted epitopes in post-vaccination SARS-CoV-2 infections data

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Bhattacharya Lab, Immunobiology, University of Arizona

Accession:: PRJNA1014484
ID:: 1014484

Select item 10009708.

Systems biological assessment of the temporal dynamics of immunity to a viral infection in the first weeks and months of life

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Bali Pulendran, Institute for Immunity, Transplantation and Infection, Stanford University

Accession:: PRJNA1000970
ID:: 1000970

Select item 9455129.

An ancestral vaccine induces anti-Omicron antibodies by hypermutation

: Project data type: Raw sequence reads

Scope:: Multispecies

Seoul National University

Accession:: PRJNA945512
ID:: 945512

Select item 92431710.

SARS-CoV-2 sequence in Norway rats (Rattus norvegicus) from New York City

: Project data type: Raw sequence reads

Scope:: Multispecies

Walter Reed Army Institute of Research

Accession:: PRJNA924317
ID:: 924317

Select item 90569611.

Differential RNA editing landscapes in host cell versus the SARS-CoV-2 genome

: Project data type: Raw sequence reads

Scope:: Multispecies

University of Gdansk

Accession:: PRJNA905696
ID:: 905696

Select item 88315312.

SARS-CoV-2 monitoring in mink farms in Poland

: Project data type: Other

Scope:: Monoisolate

national veterinary research institute

Accession:: PRJEB56174
ID:: 883153

Select item 88003513.

Severe acute respiratory syndrome coronavirus 2

Preparation of viral stacks for SARS-CoV-2 clinical isolates

Taxonomy:: Severe acute respiratory syndrome coronavirus 2

: Project data type: Transcriptome or Gene expression

Scope:: Monoisolate

The Sato Lab Division of Systems Virology Department of Microbiology and Immunology, The Institute of Medical Science, The University of Tokyo

Accession:: PRJDB14324
ID:: 880035

Select item 85829114.

Severe acute respiratory syndrome coronavirus 2

Preparation of viral stocks for clinical isolates of the SARS-CoV-2 Omicron variants

Taxonomy:: Severe acute respiratory syndrome coronavirus 2

: Project data type: Transcriptome or Gene expression

Scope:: Synthetic

The Sato Lab Division of Systems Virology Department of Microbiology and Immunology, The Institute of Medical Science, The University of Tokyo

Accession:: PRJDB13906
ID:: 858291

Select item 84034315.

Rapid hypermutation B cell trajectory recruits previously primed B cells upon third SARS-CoV-2 mRNA vaccination

B cell maturation trajectories after SARS-CoV-2 booster vaccination

: Project data type: Other

Scope:: Monoisolate

MARTIN-LUTHER-UNIVERSITY HALLE-WITTENBERG, INSTITU

Accession:: PRJEB50803
ID:: 840343

Select item 83820516.

Profiling of human monoclonal antibodies targeting SARS-CoV-2 Omicron variant

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Other

Scope:: Multiisolate

Yale University

Accession:: PRJNA838205
ID:: 838205

Select item 83290317.

Primary exposure to SARS-CoV-2 variants elicits convergent epitope specificities, immunoglobulin V gene usage and public B cell clones

: Project data type: Raw sequence reads

Scope:: Multispecies

NIAID

Accession:: PRJNA832903
ID:: 832903

Select item 83213918.

Heterologous ChAdOx1-BNT162b2 vaccination in a Korean cohort induces a robust genetic immune and antibody response that includes Omicron [RNA_seq]

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Laboratory of Genetics and Physiology, National Institute of Diabetes and Digestive and Kidney (NIDDK), National Institutes of Health (NIH)

Accession:: PRJNA832139
ID:: 832139

Select item 83213819.

Heterologous ChAdOx1-BNT162b2 vaccination in a Korean cohort induces a robust genetic immune and antibody response that includes Omicron [scRNA-seq]

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Laboratory of Genetics and Physiology, National Institute of Diabetes and Digestive and Kidney (NIDDK), National Institutes of Health (NIH)

Accession:: PRJNA832138
ID:: 832138

Select item 83213120.

Heterologous ChAdOx1-BNT162b2 vaccination in Korean cohort induces robust immune and antibody responses that includes Omicron

: Umbrella project

Laboratory of Genetics and Physiology, National Institute of Diabetes and Digestive and Kidney (NIDDK), National Institutes of Health (NIH)

Accession:: PRJNA832131
ID:: 832131

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