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BioProject

Organizing biological data

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Items: 15

Select item 10138871.

A pan-European study of Escherichia coli shows differences in profile and transmission of critical resistances between One-Health compartments

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

NORWEGIAN VETERINARY INSTITUTE

Accession:: PRJEB64161
ID:: 1013887

Select item 9884672.

Microglia-derived TGF-β1 ligand maintains microglia homeostasis via autocrine mechanism and is critical for normal cognitive function in adult mouse brain

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

University of Cincinnati

Accession:: PRJNA988467
ID:: 988467

Select item 8200303.

Dynamic control of metabolic zonation and liver repair by endothelial cell Wnt2 and Wnt9b revealed by single cell spatial transcriptomics using Molecular Cartography

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Other

Scope:: Multiisolate

Pathology, University of Pittsburgh

Accession:: PRJNA820030
ID:: 820030

Select item 7819424.

Vibrio vulnificus MARTX toxin effector domains differentially remodel the transcriptional response of intestinal epithelial cells

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Satchell Lab Ward 6-225, Microbiology-Immunology, Northwestern University

Accession:: PRJNA781942
ID:: 781942

Select item 6432035.

Prolat

A comprehensive evaluation of the impact of cow’s milk containing different beta-casein profiles on gut health of aging mice

: Project data type: Other

Scope:: Monoisolate

CREA-NUT (Food and Nutrition Research Centre)

Accession:: PRJEB37293
ID:: 643203

Select item 5999836.

Zebrafish Retina thrb-/- RNA-seq

Organism:: Danio rerio

Taxonomy:: Danio rerio (zebrafish)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Pathology and Immunology, Washington University School of Medicine

Accession:: PRJNA599983
ID:: 599983

Select item 5755617.

Enhancers predominantly control transcription initiation [Capture-C]

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Other

Scope:: Multiisolate

Hughes, MRC Weatherall Institute of Molecular Medicine, University of Oxford

Accession:: PRJNA575561
ID:: 575561

Select item 5618308.

RNAseq of souble factors in RPE cells from Cryba1 conditional knockout (cKO) mice

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Glia Lab, Ophthalmology, University of Pittsburgh

Accession:: PRJNA561830
ID:: 561830

Select item 5054779.

RNA-seq of HBBP1 suppression during HPCs erythroid differentiation

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Peking Union Medical College

Accession:: PRJNA505477
ID:: 505477

Select item 49018110.

Transcriptomic Signature of Right Ventricular Failure in Experimental Pulmonary Arterial Hypertension: Deep Sequencing Demonstrates Mitochondrial, Fibrotic, Inflammatory and Angiogenic Abnormalities

Organism:: Rattus norvegicus

Taxonomy:: Rattus norvegicus (Norway rat)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Medicine, Queen's University

Accession:: PRJNA490181
ID:: 490181

Select item 48456011.

Homo sapiens

Gene expression profiles in human breast tumor cell line MCF7

Taxonomy:: Homo sapiens (human)

: Project data type: Other

Scope:: Other

Laboratory of Molecular Cell Biology, Graduate School of Pharmaceutical Sciences, Chiba University

Accession:: PRJDB6489
ID:: 484560

Select item 35312812.

Ribosomal proteins Rpl22 and Rpl22l1 control morphogenesis by regulating pre-mRNA splicing

: Project data type: Raw sequence reads

Scope:: Multispecies

Fox Chase Cancer Center

Accession:: PRJNA353128
ID:: 353128

Select item 10948313.

Mus musculus

Liver X receptor beta is the dominant LXR subtype in skeletal muscle

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Nutrition, Metabolism & Genomics Group, Div. Human Nutrition, Wageningen University

Accession:: PRJNA109483
ID:: 109483

Select item 9640314.

Mus musculus

Expression analysis of Day 0 versus Day 1 involuting mouse mammary gland

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Dr. Yvonne Myal, Pathology, University of Manitoba

Accession:: PRJNA96403
ID:: 96403

Select item 8498315.

Rattus norvegicus

Aging in rat heart

Taxonomy:: Rattus norvegicus (Norway rat)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Medicine, Brigham and Women's Hospital

Accession:: PRJNA84983
ID:: 84983

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A1, Beta (15)
BioProject
Formicidae sp. NZAC 03011515 voucher NZAC:03011515 cytochrome oxidase subunit I ...
Formicidae sp. NZAC 03011515 voucher NZAC:03011515 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial
gi|808155876|gb|KP421509.1|

Nucleotide
Formicidae sp. NZAC 03013677 voucher NZAC:03013677 cytochrome oxidase subunit I ...
Formicidae sp. NZAC 03013677 voucher NZAC:03013677 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial
gi|808154786|gb|KP420964.1|

Nucleotide
Metaperipatus blainvillei voucher NZAC:03005945 28S ribosomal RNA gene, partial ...
Metaperipatus blainvillei voucher NZAC:03005945 28S ribosomal RNA gene, partial sequence
gi|285029456|gb|GQ911160.1|

Nucleotide
LOC110241297 [Exaiptasia diaphana]
LOC110241297 [Exaiptasia diaphana]
Gene ID:110241297

Gene

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