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Accession: PRJEB4477 ID: 230313

Discovery_of_natural_pneumococcal_mutation_rates_during_controlled_colonisation_of_the_human_nasopharynx

http://www.sanger.ac.uk/resources/downloads/bacteria/streptococcus-pneumoniae. More...
AccessionPRJEB4477
Data TypeGenome sequencing and assembly
ScopeMonoisolate
SubmissionRegistration date: 1-Dec-2013
Wellcome Sanger Institute
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)7797
WGS master230
SRA Experiments279
Protein Sequences470313
Other datasets
BioSample274
Assembly230
Assembly details:
Assembly levelNumber of Assemblies
11
219
230
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_001234125.1ContigCTRR00000000SAMEA2167693
A1
GCA_900049095.1ContigFIBP00000000SAMEA2147836
2690STDY5561684
GCA_900056155.1ContigFIED00000000SAMEA2148098
2690STDY5561827
GCA_900054075.1ContigFHXT00000000SAMEA2151986
2690STDY5561918
GCA_900058235.1ContigFIDJ00000000SAMEA2152004
2690STDY5561708
GCA_900054265.1ContigFIBV00000000SAMEA2145996
2690STDY5561751
GCA_900062195.1ContigFHYA00000000SAMEA2145462
2690STDY5561909
GCA_900055825.1ContigFICJ00000000SAMEA2144905
2690STDY5561803
GCA_900057225.1ContigFIAK00000000SAMEA2156939
2690STDY5561820
GCA_900055845.1ContigFIEW00000000SAMEA2163573
2690STDY5561824
GCA_900059385.1ContigFIAG00000000SAMEA2151928
2690STDY5561694
GCA_900061875.1ContigFIBE00000000SAMEA2152036
2690STDY5561685
GCA_900064955.1ContigFHXQ00000000SAMEA2152124
2690STDY5561905
GCA_900058225.1ContigFICW00000000SAMEA1964141
2690STDY5561688
GCA_900061285.1ScaffoldFHXZ00000000SAMEA2150976
2690STDY5561854
GCA_900052805.1ContigFHYG00000000SAMEA2152460
2690STDY5561913
GCA_900064285.1ContigFIDI00000000SAMEA2160852
2690STDY5561722
GCA_900051245.1ContigFIDW00000000SAMEA2156331
2690STDY5561716
GCA_900057965.1ContigFICV00000000SAMEA2158938
2690STDY5561689
GCA_900065665.1ContigFIAB00000000SAMEA2153219
2690STDY5561746
GCA_900052215.1ContigFIES00000000SAMEA2150362
2690STDY5561845
GCA_900052185.1ContigFHYI00000000SAMEA2161329
2690STDY5561862
GCA_900055755.1ContigFHYW00000000SAMEA2160347
2690STDY5561729
GCA_900054275.1ContigFICF00000000SAMEA1967149
2690STDY5561674
GCA_900056455.1ContigFHYZ00000000SAMEA2151298
2690STDY5561916
GCA_900055045.1ContigFHYY00000000SAMEA2158668
2690STDY5561711
GCA_900065645.1ContigFHXB00000000SAMEA2161546
2690STDY5561867
GCA_900054065.1ContigFHXR00000000SAMEA2146305
2690STDY5561847
GCA_900057905.1ContigFHWL00000000SAMEA2158206
2690STDY5561856
GCA_900061335.1ContigFIEL00000000SAMEA1969334
2690STDY5561701
GCA_900055815.1ContigFICH00000000SAMEA2156065
2690STDY5561801
GCA_900053785.1ContigFIEU00000000SAMEA2154429
2690STDY5561741
GCA_900051535.1ContigFIAM00000000SAMEA2143422
2690STDY5561714
GCA_900056065.1ContigFHZK00000000SAMEA2144650
2690STDY5561663
GCA_900053585.1ContigFIBS00000000SAMEA2163206
2690STDY5561778
GCA_900055745.1ContigFHYX00000000SAMEA2162426
2690STDY5561742
GCA_900059715.1ContigFHWE00000000SAMEA1971418
2690STDY5561662
GCA_900055795.1ContigFIBK00000000SAMEA2161004
2690STDY5561749
GCA_900050355.1ContigFHWJ00000000SAMEA2157196
2690STDY5561825
GCA_900065695.1ContigFIEX00000000SAMEA2148396
2690STDY5561671
GCA_900060305.1ContigFHYL00000000SAMEA2144832
2690STDY5561879
GCA_900065375.1ContigFIEP00000000SAMEA1968001
2690STDY5561724
GCA_900059725.1ContigFHWF00000000SAMEA2150198
2690STDY5561859
GCA_900065195.1ContigFHZH00000000SAMEA2156333
2690STDY5561830
GCA_900060095.1ContigFIAW00000000SAMEA2162758
2690STDY5561733
GCA_900051485.1ContigFHYN00000000SAMEA2156940
2690STDY5561906
GCA_900052205.1ContigFIBW00000000SAMEA2160432
2690STDY5561869
GCA_900056785.1ContigFIBN00000000SAMEA2154215
2690STDY5561838
GCA_900055085.1ScaffoldFIAA00000000SAMEA2154019
2690STDY5561837
GCA_900055095.1ContigFICY00000000SAMEA2153227
2690STDY5561843
GCA_900062815.1ContigFHWN00000000SAMEA2144033
2690STDY5561756
GCA_900054245.1ContigFHYU00000000SAMEA2161644
2690STDY5561730
GCA_900055065.1ContigFHZY00000000SAMEA2163628
2690STDY5561763
GCA_900063995.1ContigFIBF00000000SAMEA2151978
2690STDY5561675
GCA_900056055.1ContigFHZJ00000000SAMEA2144474
2690STDY5561805
GCA_900051865.1ContigFHYJ00000000SAMEA2157950
2690STDY5561922
GCA_900051895.1ContigFIAX00000000SAMEA2162760
2690STDY5561682
GCA_900062975.1ContigFHZG00000000SAMEA2155886
2690STDY5561764
GCA_900052495.1ContigFHWG00000000SAMEA2151856
2690STDY5561785
GCA_900052795.1ContigFHXI00000000SAMEA2156071
2690STDY5561903
GCA_900055775.1ContigFIAQ00000000SAMEA2153944
2690STDY5561664
GCA_900060315.1ContigFIAZ00000000SAMEA2147658
2690STDY5561774
GCA_900064965.1ContigFHZD00000000SAMEA2154822
2690STDY5561775
GCA_900060615.1ContigFHZF00000000SAMEA2153357
2690STDY5561769
GCA_900057035.1ContigFICL00000000SAMEA2150767
2690STDY5561698
GCA_900057915.1ContigFHWM00000000SAMEA2153949
2690STDY5561884
GCA_900054095.1ContigFIER00000000SAMEA2161928
2690STDY5561802
GCA_900064005.1ContigFIBH00000000SAMEA2161974
2690STDY5561783
GCA_900063515.1ContigFIAL00000000SAMEA2147526
2690STDY5561761
GCA_900056045.1ScaffoldFHZI00000000SAMEA2143353
2690STDY5561776
GCA_900053775.1ContigFIAR00000000SAMEA2156016
2690STDY5561782
GCA_900049605.1ContigFHZU00000000SAMEA2151360
2690STDY5561752
GCA_900054255.1ContigFIAD00000000SAMEA2148027
2690STDY5561753
GCA_900050365.1ContigFHWP00000000SAMEA2154555
2690STDY5561849
GCA_900051555.1ContigFIDU00000000SAMEA2150160
2690STDY5561929
GCA_900065365.1ContigFHXJ00000000SAMEA1966803
2690STDY5561670
GCA_900049915.1ContigFIDT00000000SAMEA2162967
2690STDY5561804
GCA_900062965.1ContigFHYD00000000SAMEA2149457
2690STDY5561917
GCA_900057215.1ContigFIAJ00000000SAMEA2150962
2690STDY5561754
GCA_900057185.1ContigFHWU00000000SAMEA2161070
2690STDY5561900
GCA_900063255.1ContigFIEZ00000000SAMEA2157058
2690STDY5561691
GCA_900061315.1ContigFIEG00000000SAMEA2148019
2690STDY5561823
GCA_900059745.1ContigFIEK00000000SAMEA2149917
2690STDY5561728
GCA_900056125.1ContigFICB00000000SAMEA2156040
2690STDY5561939
GCA_900051545.1ContigFIBX00000000SAMEA2145380
2690STDY5561781
GCA_900062205.1ContigFIBD00000000SAMEA2153623
2690STDY5561840
GCA_900065185.1ContigFHXL00000000SAMEA2162514
2690STDY5561910
GCA_900049105.1ContigFICC00000000SAMEA2158078
2690STDY5561717
GCA_900058465.1ScaffoldFICS00000000SAMEA2162314
2690STDY5561727
GCA_900051495.1ContigFHYO00000000SAMEA2149827
2690STDY5561880
GCA_900062185.1ContigFHXX00000000SAMEA2146870
2690STDY5561850
GCA_900052505.1ContigFHZB00000000SAMEA2163530
2690STDY5561765
GCA_900062045.1ContigFICP00000000SAMEA2144407
2690STDY5561681
GCA_900052785.1ContigFHWY00000000SAMEA2151247
2690STDY5561842
GCA_900062035.1ContigFIBI00000000SAMEA2151555
2690STDY5561735
GCA_900051915.1ContigFICM00000000SAMEA2154056
2690STDY5561810
GCA_900055455.1ContigFHZX00000000SAMEA2146043
2690STDY5561697
GCA_900056445.1ContigFHWQ00000000SAMEA1965983
2690STDY5561857
GCA_900062055.1ContigFIEO00000000SAMEA2162919
2690STDY5561721
GCA_900059055.1ContigFIAY00000000SAMEA2162750
2690STDY5561921
GCA_900050765.1ContigFIAC00000000SAMEA2153581
2690STDY5561834
GCA_900048815.1ContigFIEH00000000SAMEA2162846
2690STDY5561740
GCA_900056795.1ContigFIEA00000000SAMEA2143929
2690STDY5561699
GCA_900064275.1ContigFIDH00000000SAMEA2144900
2690STDY5561710
GCA_900063985.1ContigFHXF00000000SAMEA2163493
2690STDY5561852
GCA_900059875.1ContigFIAU00000000SAMEA2157648
2690STDY5561709
GCA_900055765.1ContigFHZC00000000SAMEA2159021
2690STDY5561705
GCA_900059405.1ContigFIDB00000000SAMEA2158810
2690STDY5561720
GCA_900054785.1ContigFHXU00000000SAMEA2153934
2690STDY5561897
GCA_900054805.1ContigFIDK00000000SAMEA2147603
2690STDY5561676
GCA_900055835.1ScaffoldFIDO00000000SAMEA2147155
2690STDY5561695
GCA_900057455.1ContigFHZR00000000SAMEA2143673
2690STDY5561806
GCA_900057935.1ContigFHZL00000000SAMEA2148967
2690STDY5561839
GCA_900056105.1ContigFHZT00000000SAMEA2152614
2690STDY5561726
GCA_900065205.1ContigFIAN00000000SAMEA2151113
2690STDY5561885
GCA_900059045.1ContigFHZO00000000SAMEA2149678
2690STDY5561748
GCA_900054085.1ContigFHYV00000000SAMEA1970344
2690STDY5561732
GCA_900049905.1ContigFIDR00000000SAMEA2145279
2690STDY5561696
GCA_900056115.1ContigFIAT00000000SAMEA2146494
2690STDY5561706
GCA_900054525.1ContigFIDG00000000SAMEA2163143
2690STDY5561707
GCA_900055445.1ContigFHYB00000000SAMEA2145081
2690STDY5561679
GCA_900062955.1ContigFHXE00000000SAMEA2149163
2690STDY5561848
GCA_900049585.1ContigFHYH00000000SAMEA2160040
2690STDY5561678
GCA_900060115.1ContigFICZ00000000SAMEA2156679
2690STDY5561723
GCA_900063525.1ContigFICN00000000SAMEA2145941
2690STDY5561687
GCA_900061325.1ContigFIEM00000000SAMEA2146468
2690STDY5561665
GCA_900049925.1ContigFIDV00000000SAMEA2147374
2690STDY5561822
GCA_900058445.1ContigFHXV00000000SAMEA2161978
2690STDY5561907
GCA_900062825.1ContigFHYC00000000SAMEA1967278
2690STDY5561881
GCA_900062225.1ContigFIEN00000000SAMEA2145958
2690STDY5561744
GCA_900063975.1ContigFHXD00000000SAMEA2147597
2690STDY5561886
GCA_900049615.1ContigFIBM00000000SAMEA2147447
2690STDY5561831
GCA_900057665.1ContigFHWW00000000SAMEA2158728
2690STDY5561882
GCA_900055055.1ContigFHZW00000000SAMEA2158764
2690STDY5561821
GCA_900060925.1ScaffoldFHXW00000000SAMEA2153075
2690STDY5561914
GCA_900056815.1ContigFIEV00000000SAMEA2159794
2690STDY5561725
GCA_900059015.1ContigFHWH00000000SAMEA2160782
2690STDY5561912
GCA_900059025.1ContigFHYP00000000SAMEA2144237
2690STDY5561895
GCA_900052195.1ContigFIBU00000000SAMEA2157458
2690STDY5561826
GCA_900063265.1ContigFIFA00000000SAMEA2162950
2690STDY5561686
GCA_900051885.1ContigFHYQ00000000SAMEA1965704
2690STDY5561799
GCA_900060625.1ContigFHZM00000000SAMEA2161954
2690STDY5561755
GCA_900059395.1ContigFICX00000000SAMEA2145978
2690STDY5561719
GCA_900061305.1ScaffoldFIDC00000000SAMEA2150838
2690STDY5561759
GCA_900061265.1ContigFHWK00000000SAMEA2162874
2690STDY5561747
GCA_900049575.1ContigFHYF00000000SAMEA2161407
2690STDY5561851
GCA_900059035.1ContigFHZN00000000SAMEA2146871
2690STDY5561677
GCA_900056145.1ContigFIEI00000000SAMEA2155889
2690STDY5561737
GCA_900051515.1ContigFHYS00000000SAMEA2144426
2690STDY5561797
GCA_900055785.1ContigFIBJ00000000SAMEA2161825
2690STDY5561786
GCA_900063505.1ContigFHYK00000000SAMEA2146228
2690STDY5561858
GCA_900056135.1ContigFIEC00000000SAMEA2157581
2690STDY5561767
GCA_900065225.1ContigFIEQ00000000SAMEA2151371
2690STDY5561925
GCA_900060605.1ContigFHXM00000000SAMEA2147676
2690STDY5561855
GCA_900065215.1ContigFIAO00000000SAMEA2157918
2690STDY5561770
GCA_900050755.1ContigFHYE00000000SAMEA2158965
2690STDY5561888
GCA_900054795.1ContigFIDF00000000SAMEA2153629
2690STDY5561693
GCA_900065655.1ContigFHXC00000000SAMEA2151236
2690STDY5561896
GCA_900064265.1ContigFIDE00000000SAMEA2159369
2690STDY5561836
GCA_900060915.1ContigFHXS00000000SAMEA2153452
2690STDY5561780
GCA_900062215.1ContigFIBC00000000SAMEA2154355
2690STDY5561673
GCA_900049935.1ContigFIDX00000000SAMEA2156514
2690STDY5561734
GCA_900063215.1ScaffoldFHXK00000000SAMEA2147470
2690STDY5561846
GCA_900056075.1ContigFHZP00000000SAMEA2158949
2690STDY5561736
GCA_900051855.1ContigFHWT00000000SAMEA2150817
2690STDY5561863
GCA_900062985.1ContigFICR00000000SAMEA2147855
2690STDY5561666
GCA_900057945.1ContigFIBQ00000000SAMEA1973171
2690STDY5561787
GCA_900059885.1ContigFIDP00000000SAMEA2144032
2690STDY5561833
GCA_900051875.1ContigFHYM00000000SAMEA2153460
2690STDY5561894
GCA_900050375.1ContigFIAF00000000SAMEA2154956
2690STDY5561750
GCA_900049595.1ContigFHZE00000000SAMEA2158198
2690STDY5561718
GCA_900063245.1ContigFIEY00000000SAMEA2147176
2690STDY5561743
GCA_900055465.1ContigFICG00000000SAMEA2149909
2690STDY5561807
GCA_900061295.1ContigFHXY00000000SAMEA2145426
2690STDY5561868
GCA_900056085.1ContigFHZQ00000000SAMEA2162497
2690STDY5561844
GCA_900056755.1ContigFHWX00000000SAMEA2143066
2690STDY5561919
GCA_900056745.1ContigFHWS00000000SAMEA2153628
2690STDY5561891
GCA_900061885.1ContigFIBG00000000SAMEA1965930
2690STDY5561772
GCA_900060935.1ContigFICO00000000SAMEA2160708
2690STDY5561668
GCA_900055475.1ContigFIET00000000SAMEA2144502
2690STDY5561904
GCA_900060905.1ContigFHXO00000000SAMEA2142484
2690STDY5561889
GCA_900056805.1ContigFIEF00000000SAMEA2154143
2690STDY5561892
GCA_900065675.1ContigFIBO00000000SAMEA2154677
2690STDY5561703
GCA_900051525.1ScaffoldFHZV00000000SAMEA2152228
2690STDY5561777
GCA_900063225.1ContigFIDA00000000SAMEA2144268
2690STDY5561923
GCA_900056775.1ContigFIAI00000000SAMEA2146057
2690STDY5561829
GCA_900057955.1ContigFICU00000000SAMEA2159904
2690STDY5561667
GCA_900051235.1ContigFIDS00000000SAMEA2144368
2690STDY5561713
GCA_900056095.1ContigFHZS00000000SAMEA2154989
2690STDY5561766
GCA_900058675.1ContigFICE00000000SAMEA2153095
2690STDY5561692
GCA_900060085.1ContigFHWI00000000SAMEA2146859
2690STDY5561866
GCA_900057465.1ContigFIBT00000000SAMEA2144498
2690STDY5561712
GCA_900063005.1ContigFIEB00000000SAMEA2149883
2690STDY5561700
GCA_900058215.1ContigFICD00000000SAMEA2161720
2690STDY5561672
GCA_900062995.1ContigFICT00000000SAMEA2157195
2690STDY5561924
GCA_900057475.1ContigFIDZ00000000SAMEA2156835
2690STDY5561731
GCA_900060945.1ContigFICQ00000000SAMEA2161694
2690STDY5561809
GCA_900058205.1ContigFHYT00000000SAMEA2161668
2690STDY5561798
GCA_900057435.1ContigFHXA00000000SAMEA2157728
2690STDY5561864
GCA_900050775.1ContigFIBR00000000SAMEA2157277
2690STDY5561796
GCA_900057925.1ContigFHWO00000000SAMEA2142457
2690STDY5561893
GCA_900056475.1ContigFIDN00000000SAMEA2144041
2690STDY5561927
GCA_900063535.1ContigFIDY00000000SAMEA2150764
2690STDY5561768
GCA_900053115.1ContigFIBY00000000SAMEA2152755
2690STDY5561928
GCA_900055075.1ContigFHZZ00000000SAMEA2153339
2690STDY5561828
GCA_900055805.1ContigFIBL00000000SAMEA2162901
2690STDY5561898
GCA_900059735.1ContigFIDL00000000SAMEA2145391
2690STDY5561690
GCA_900065685.1ContigFIEJ00000000SAMEA2156104
2690STDY5561835
GCA_900056765.1ContigFHZA00000000SAMEA2156154
2690STDY5561841
GCA_900058455.1ContigFIAS00000000SAMEA1969957
2690STDY5561915
GCA_900056465.1ContigFIAE00000000SAMEA2148573
2690STDY5561832
GCA_900060105.1ContigFIBB00000000SAMEA2155176
2690STDY5561745
GCA_900061865.1ContigFIAV00000000SAMEA2155718
2690STDY5561739
GCA_900057195.1ContigFHWV00000000SAMEA2156552
2690STDY5561911
GCA_900051905.1ContigFICI00000000SAMEA2157783
2690STDY5561926
GCA_900050385.1ContigFIAH00000000SAMEA2145007
2690STDY5561762
GCA_900060595.1ScaffoldFHWR00000000SAMEA2160399
2690STDY5561860
GCA_900057205.1ContigFHWZ00000000SAMEA2157262
2690STDY5561887
GCA_900059065.1ContigFIBA00000000SAMEA2143237
2690STDY5561773
GCA_900063495.1ContigFHXP00000000SAMEA2161031
2690STDY5561890
GCA_900055035.1ContigFHXH00000000SAMEA2154880
2690STDY5561883
GCA_900064975.1ContigFIAP00000000SAMEA2160594
2690STDY5561680
GCA_900057975.1ContigFIEE00000000SAMEA2154004
2690STDY5561758
GCA_900052815.1ScaffoldFIDM00000000SAMEA2144891
2690STDY5561669
GCA_900063235.1ContigFIDD00000000SAMEA2144118
2690STDY5561808
GCA_900051505.1ContigFHYR00000000SAMEA2146735
2690STDY5561902
GCA_900053105.1ContigFIBZ00000000SAMEA2156620
2690STDY5561784
GCA_900051925.1ContigFIDQ00000000SAMEA2144842
2690STDY5561702
GCA_900057445.1ContigFHXG00000000SAMEA2153660
2690STDY5561865
GCA_900061275.1ContigFHXN00000000SAMEA2157572
2690STDY5561908
SRA Data Details
ParameterValue
Data volume, Gbases141
Data volume, Mbytes97767

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