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Items: 1 to 20 of 32

1.

Rye Wheat Hydrids GBS

Major chromosome rearrangements in intergeneric wheat x rye hybrids in compatible and incompatible crosses detected by GBS read coverage analysis

Project data type: Other
Scope:
Monoisolate
Leibniz Institute of Plant Genetics and Crop Plant Research
Accession:
PRJEB64645
ID:
1101832
2.

Nanopore Amplicon-Seq of Glutenin Allelic Variants in a Wheat Collection

Project data type: Raw sequence reads
Scope:
Multispecies
All-Russia Reasearch Institure for Agricultural Biotechnology
Accession:
PRJNA1054788
ID:
1054788
3.

Staufen1 Represses the FOXA1-Regulated Transcriptome by Destabilizing FOXA1 mRNA in Colorectal Cancer Cells

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
NCI, NIH
Accession:
PRJNA983405
ID:
983405
4.

bacterioplankton metagenome

Variations in Daphnia pulex host-associated bacteria by host phylogenetic relationship.

Taxonomy:
bacterioplankton metagenome
Project data type: Random survey
Scope:
Multispecies
Aquatic Ecology, Department of Ecological Developmental Adaptability Life Sciences, Graduate school of life sciences, Tohoku University
Accession:
PRJDB13741
ID:
957977
5.

Open ocean and coastal strains of the N2-fixing cyanobacterium UCYN-A have distinct transcriptomes

Taxonomy:
Candidatus Atelocyanobacterium thalassa
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Dr. Jonathan Zehr Lab, Ocean Sciences, UC Santa Cruz
Accession:
PRJNA850440
ID:
850440
6.

RNA-seq of HTNV-infected murine bone marrow-derived macrophages (mBMDM) from 0 to 36 hours

Project data type: Other
Scope:
Monoisolate
European Bioinformatics Institute
Accession:
PRJEB50434
ID:
803694
7.

Specification of CNS macrophage subsets occurs postnatally in defined anatomical niches

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Prinz Lab, Institute of Neuropathology, University of Freiburg Medical Center
Accession:
PRJNA800667
ID:
800667
8.

Hepatitis B virus

Molecular characterization of full genome hepatitis b virus sequences from an urban hospital cohort in Pretoria, South Africa

Taxonomy:
Hepatitis B virus
Project data type: Genome sequencing and assembly
Scope:
Multiisolate
University of Pretoria
Accession:
PRJNA737147
ID:
737147
9.

Comprehensive dataset of shotgun metagenomes from stratified freshwater lakes and ponds

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
Department of Aquatic Sciences and Assessment
Accession:
PRJEB38681
ID:
639763
10.

The protein modifier SUMO is critical for Arabidopsis shoot meristem maintenance at warmer ambient temperatures

Organism:
Arabidopsis thaliana
Taxonomy:
Arabidopsis thaliana (thale cress)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Microarray Department, University of Amsterdam
Accession:
PRJNA627419
ID:
627419
11.

Surfactant protein A (SP-A) variants and sex-specific regulation of gene expression networks in alveolar macrophages in response to Klebsiella pneumoniae-induced lung infection

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Pediatrics, Penn State University College of Medicine
Accession:
PRJNA604176
ID:
604176
12.

Pervasive and non-random recombination in near-full length HIV genomes from Uganda

Pervasive and non-random recombination in near-full length HIV genomes from Uganda. HIV genomes assembled from clinical samples. Please see www.pangea-hiv.org for details and additional information.

Project data type: Other
Scope:
Monoisolate
UCL
Accession:
PRJEB35616
ID:
603932
13.

A novel A allele at the ABO gene locus characterized by duplication of 21 bp identified in Polish individuals with a weak A and normal B subgroup phenotypes

Project data type: Other
Scope:
Monoisolate
Institute of Hematology and Transfusion Medicine
Accession:
PRJEB36258
ID:
602278
14.

WGS of OXA-48-producing K. pneumoniae

Whole-genome analysis of endemic OXA-48-producing K. pneumoniae clinical isolates in Catalonia, Spain

Project data type: Other
Scope:
Monoisolate
isciii
Accession:
PRJEB27508
ID:
512716
15.

HIV-1 Vpu exerts broad immunosuppressive effects by inhibiting NF-κB-dependent gene expression

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Sanford Burnham Prebys Medical Discovery Institute
Accession:
PRJNA482835
ID:
482835
16.

Inversion breakpoints in Drosophila

Inversion evolutionary rates might limit the experimental identification of inversion breakpoints in non-model species

Project data type: Other
Scope:
Monoisolate
UNIVERSITAT DE BARCELONA
Accession:
PRJEB23256
ID:
473098
17.

Gossypium hirsutum

Expression data from the process of chilling stress causing Alternaria alternata infection and leading to cotton leaf senescence

Taxonomy:
Gossypium hirsutum (cotton)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Institute of Plant Protection, Chinese Academy of Agricultural Sciences
Accession:
PRJNA300311
ID:
300311
18.

Transcriptome_of_the_vomeronasal_organ_in_Vmn2r1_knock_out_mice

Project data type: Transcriptome or Gene expression
Scope:
Monoisolate
Wellcome Sanger Institute
Accession:
PRJEB9631
ID:
299380
19.

Drosophila melanogaster

RNA expression in fly thoraxes of 4 WT, 4 dCanA1 and 4 dCanA-14F calcineurin mutant fly lines

Taxonomy:
Drosophila melanogaster (fruit fly)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Genome Informatics, Biomedical Informatics, Developmental Biology, Cincinnati Children's Hospital Medical Center
Accession:
PRJNA291854
ID:
291854
20.

Homo sapiens

Tissue-specific patterns of gene expression in the epithelium and stroma of normal colon in healthy individuals in an aspirin intervention trial

Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Public Health Sciences, Fred Hutchinson Cancer Research Center
Accession:
PRJNA291533
ID:
291533

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