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Items: 20

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1.

MR1-restricted T cell clonotypes are associated with “resistance” to Mycobacterium tuberculosis infection

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
University of Washington
Accession:
PRJNA1103202
ID:
1103202

2.

Changes of the gut microbiota and metabolite characteristics in obesity-prone and obesity-resistant dogs induced by a high-fat diet

Project data type: Raw sequence reads
Scope:
Multispecies
Qinghai University
Accession:
PRJNA1068288
ID:
1068288

3.

Carboxypeptidase M modulates BMSCs osteogenesis-adipogenesis via the MAPK/ERK pathway: An integrated single-cell and bulk transcriptomic study

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Sourthern Medical University
Accession:
PRJNA1049347
ID:
1049347

4.

Age-related changes in human skeletal muscle transcriptome and proteome are more affected by chronic inflammation and physical inactivity than primary aging

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Laboratory of muscle physiology, Institute of Biomedical Problems of the Russian Academy of Sciences
Accession:
PRJNA1011971
ID:
1011971

5.

Single-cell analysis of human MAIT cell transcriptional, functional and clonal diversity [Exp 2]

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Other
Scope:
Multiisolate
Nuffield Department of Medicine, University of Oxford
Accession:
PRJNA998016
ID:
998016

6.

Expression data from OL and OC treated B16F10 cells

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
University of Tsukuba
Accession:
PRJNA995550
ID:
995550

7.

Single-cell analysis of human MAIT cell transcriptional, functional and clonal diversity [Exp 1]

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Other
Scope:
Multiisolate
Nuffield Department of Medicine, University of Oxford
Accession:
PRJNA799380
ID:
799380

8.

Single-cell analysis of human MAIT cell transcriptional, functional and clonal diversity [Exp 3]

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Other
Scope:
Multiisolate
Nuffield Department of Medicine, University of Oxford
Accession:
PRJNA799379
ID:
799379

9.

Effect of neonatal exposure to endocrine active compounds on the ovarian function of adult pig - molecular and epigenetic aspects

Project data type: Raw sequence reads
Scope:
Multispecies
Jagiellonian University in Krakow
Accession:
PRJNA664446
ID:
664446

10.

CF Microbiome

THE RESPIRATORY MICROBIOME IN CYSTIC FIBROSIS: COMPARTMENT PATTERNS AND CLINICAL RELATIONSHIPS

Project data type: Other
Scope:
Monoisolate
Fundacio Parc Tauli
Accession:
PRJEB31332
ID:
637544

11.

The PedBE clock accurately estimates DNA methylation age in pediatric buccal cells [dataset 8, BIBO]

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Epigenomics
Scope:
Multiisolate
Kobor, Medical Genetics, Centre for Molecular Medicine and Therapeutics / University of British Columbia
Accession:
PRJNA566201
ID:
566201

12.

Effects of agricultural pesticides in aquafeeds on wild fish feeding on leftover pellets near fish farms

Organism:
Gadus morhua
Taxonomy:
Gadus morhua (Atlantic cod)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Environmental Toxicology, Biology, University of Bergen
Accession:
PRJNA552018
ID:
552018

13.

Agr

Soil bacterial communities to agricultural wastes and consequences for N2O emissions

Project data type: Other
Scope:
Monoisolate
CING
Accession:
PRJEB26153
ID:
489047

14.

microbiota

Genome sequencing and assembly of airway microbiota of infants with CF

Project data type: Genome sequencing and assembly
Scope:
Multispecies
UMCU
Accession:
PRJNA336315
ID:
336315

15.

Homo sapiens

MiRNA Profiling of Whole Trabecular Bone: Identification of Osteoporosis-Related Changes in MiRNAs in Human Hip Bones

Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
MARData-BU, Hospital del Mar Research Institute
Accession:
PRJNA299327
ID:
299327

16.

Mus musculus

Transcriptomic characterization of the impact of 2'-fucosyllactose supplementation on intestinal adaptation following ileocecal resection.

Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Gastroenterology, Hepatology, & Nutrition, Cincinnati Children's Hospital Medical Center
Accession:
PRJNA294422
ID:
294422

17.

Rattus norvegicus

Comparison of radiation-induced rat mammary carcinomas from individuals with different sensitivity to diet-induced obesity

Taxonomy:
Rattus norvegicus (Norway rat)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Department of Radiation Effects Research, National Institute of Radiological Sciences, National Institutes for Quantum and Radiological Science and Technology
Accession:
PRJNA292703
ID:
292703

18.

Neurospora crassa

Codon usage influences the local rate of translation elongation to regulate co-translational protein folding

Taxonomy:
Neurospora crassa
Project data type: Other
Scope:
Multiisolate
Physiology, University of Texas Southwestern Medical Center
Accession:
PRJNA290152
ID:
290152

19.

Homo sapiens

Differential gene expression by NKX2-1 suppression in NCI-H2009 cells

Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Matthew Meyerson, Dana-Farber Cancer Institute
Accession:
PRJNA173376
ID:
173376

20.

Rattus norvegicus

High fat diet effects on mammary epithelium of OP and OR rats

Taxonomy:
Rattus norvegicus (Norway rat)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Laboratory for Statistical Genomics and Systems Biology, Department of Environmental Health, University of Cincinnati
Accession:
PRJNA126629
ID:
126629

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