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Organizing biological data

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Select item 11293501.

Tetranychidae

RNA-Seq data of the spider mite sub-family Tetranychinae (Acari: Tetranychidae)

Taxonomy:: Tetranychidae (spider mites)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Nihon BioData Corporation

Accession:: PRJDB17589
ID:: 1129350

Select item 10072442.

Seasonal change of sediment microbial communities in young and old mangrove forests in Xuan Thuy National Park

: Project data type: Raw sequence reads

Scope:: Multispecies

Ecology and Biological Resources

Accession:: PRJNA1007244
ID:: 1007244

Select item 9742063.

Bacterial pathogens

Genome sequencing of E. coli and Salmonella sp. from AMR surveillance pilot study in tilapia and shrimp from wet-markets, Bangladesh

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

WorldFish

Accession:: PRJNA974206
ID:: 974206

Select item 9707254.

Endocardial cells function as antigen-presenting cells to promote zebrafish heart regeneration [dst93_scrnaseq]

Organism:: Danio rerio

Taxonomy:: Danio rerio (zebrafish)

: Project data type: Transcriptome or Gene expression

Scope:: Monoisolate

Bioinformatics, Max Planck Institute for Heart and Lung Research

Accession:: PRJNA970725
ID:: 970725

Select item 9707205.

Endocardial cells function as antigen-presenting cells to promote zebrafish heart regeneration [dst173_scrnaseq]

Organism:: Danio rerio

Taxonomy:: Danio rerio (zebrafish)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Bioinformatics, Max Planck Institute for Heart and Lung Research

Accession:: PRJNA970720
ID:: 970720

Select item 9621096.

Endocardial cells function as antigen-presenting cells to promote zebrafish heart regeneration

Organism:: Danio rerio

Taxonomy:: Danio rerio (zebrafish)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

MPI for heart and lung research

Accession:: PRJNA962109
ID:: 962109

Select item 9534297.

Bradysia coprophila breed:Holo2

Structural differences between the X and X' chromosomes from Bradysia coprophila, and the first assembled model sequence of the ~55 Mb X' long paracentric inversion region

Taxonomy:: Bradysia coprophila

: Project data type: Genome sequencing and assembly

Scope:: Multiisolate

Carnegie Institution for Science

Accession:: PRJNA953429
ID:: 953429

Select item 9440328.

CoMVseq

Genomic epidemiology of SARS-CoV-2 variants circulating in a German federal state, Mecklenburg-Western Pomerania, in 2020-2022

: Project data type: Other

Scope:: Monoisolate

university medicine greifswald

Accession:: PRJEB59319
ID:: 944032

Select item 9348769.

mRNA transcriptome data of bovine granulosa cells cultured under DMSO and 50µM PD98059 treatments

Organism:: Bos taurus

Taxonomy:: Bos taurus (cattle)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Reproductive biology, Leibniz institute for farm animal biology

Accession:: PRJNA934876
ID:: 934876

Select item 92651210.

Pseudomonas extremaustralis strain:CSW01

Pseudomonas extremaustralis strain:CSW01 Genome sequencing and assembly

Taxonomy:: Pseudomonas extremaustralis

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

Instituto de Recursos Naturales y Agrobiologia de Sevilla. CSIC

Accession:: PRJNA926512
ID:: 926512

Select item 92608711.

Translation Complex Profiling analysed using sequencing (TCP-seq) applied to fission yeast cells (Schizosaccharomyces pombe)

: Project data type: Other

Scope:: Monoisolate

European Bioinformatics Institute

Accession:: PRJEB56594
ID:: 926087

Select item 91821412.

Transcriptome of HEL cells with inducible expression of ETO2-GLIS2

: Project data type: Other

Scope:: Monoisolate

European Bioinformatics Institute

Accession:: PRJEB56581
ID:: 918214

Select item 91788013.

A549 transcriptomic response to nanomaterials, intact and degraded Mn3O4-functionalized graphene, Mn3O4 nanoparticles

: Project data type: Other

Scope:: Monoisolate

iccram-university of burgos

Accession:: PRJEB34526
ID:: 917880

Select item 91181914.

Genome-wide DNA methylation and mRNA responses to a bout of higher versus lower load resistance training in previously trained men

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

V. Kraus Lab, Molecular Physiology Institute, Duke University School of Medicine

Accession:: PRJNA911819
ID:: 911819

Select item 90735915.

LncRNA EPR transcriptional activity controls intestinal mucus and prevents susceptibility to inflammation and tumorigenesis SW480 [RNA-Seq]

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

CTGB, IRCCS Ospedale San Raffaele

Accession:: PRJNA907359
ID:: 907359

Select item 90653016.

LncRNA EPR transcriptional activity controls intestinal mucus and prevents susceptibility to inflammation and tumorigenesis [RNA-seq]

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

CTGB, IRCCS Ospedale San Raffaele

Accession:: PRJNA906530
ID:: 906530

Select item 89685017.

PacBio RenSeq samples of potato cultivar Gemson

PacBio HiFi reads of the potato cultivar Gemson after enrichment for R genes used for SMRT-AgRenSeq

: Project data type: Other

Scope:: Monoisolate

James Hutton Institute

Accession:: PRJEB56825
ID:: 896850

Select item 89684918.

Illumina RenSeq samples of potato

Illumina reads of potato after enrichment for R genes used for dRenSeq and AgRenSeq

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

James Hutton Institute

Accession:: PRJEB56823
ID:: 896849

Select item 89066319.

Growth Signaling Autonomy in Circulating Tumor Cells Aids Metastatic Seeding

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Departments of Medicine and Cellular and Molecular Medicine, University of California San Diego

Accession:: PRJNA890663
ID:: 890663

Select item 88657520.

Klebsiella pneumoniae Bacteriophage

Isolation and Characterization of Novel Lytic Bacteriophage Infecting Hospital-Associated Carbapenem-Resistant Klebsiella pneumoniae Strain from Dhaka, Bangladesh