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Items: 1 to 20 of 32

1.

Systematic decoding of cis gene regulation defines context-dependent control of the multi-gene costimulatory receptor locus in human T cells [4C-seq]

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Other
Scope:
Multiisolate
Gladstone-UCSF Institute of Genomic Immunology
Accession:
PRJNA1086506
ID:
1086506
2.

Dissecting the Mechanisms of Transcriptional Synergy in Response to Proinflammatory Cytokines in Endothelial Cells

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Epigenomics
Scope:
Multiisolate
Vanderbilt University Medical Center
Accession:
PRJNA971164
ID:
971164
3.

Replication dynamics identifies the folding principles of the inactive X chromosome [scRepli-seq]

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Other
Scope:
Multiisolate
RIKEN BDR
Accession:
PRJNA870926
ID:
870926
4.

Replication dynamics identifies the folding principles of the inactive X chromosome [RNA-seq]

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
RIKEN BDR
Accession:
PRJNA870925
ID:
870925
5.

Replication dynamics identifies the folding principles of the inactive X chromosome [BrdU-IP Repli-seq]

Project data type: Other
Scope:
Multispecies
RIKEN BDR
Accession:
PRJNA870924
ID:
870924
6.

Replication dynamics identifies the folding principles of the inactive X chromosome [4C]

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Other
Scope:
Multiisolate
RIKEN BDR
Accession:
PRJNA870923
ID:
870923
7.

Replication dynamics identifies the folding principles of the inactive X chromosome

Umbrella project
RIKEN BDR
Accession:
PRJNA870918
ID:
870918
8.

HDAC1 and PRC2 mediate combinatorial control in SPI1/PU.1-dependent gene repression in murine erythroleukaemia [722_4C-seq]

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Other
Scope:
Multiisolate
Gustave Roussy
Accession:
PRJNA841833
ID:
841833
9.

HDAC1 and PRC2 mediate combinatorial control in SPI1/PU.1-dependent gene repression in murine erythroleukaemia [763_4C-seq]

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Other
Scope:
Multiisolate
Gustave Roussy
Accession:
PRJNA841832
ID:
841832
10.

The histone variant macroH2A modulates inflammatory response in cancer [UMI-4C]

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Other
Scope:
Multiisolate
Josep Carreras Leukaemia Research Institute
Accession:
PRJNA840922
ID:
840922
11.

Polymorphic endogenous retroviral element gives rise to differential epigenomic states and gene expression between distinct genetic backgrounds

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Other
Scope:
Multiisolate
HONG KONG UNIV OF SCIENCE & TECHNOLOGY
Accession:
PRJNA693565
ID:
693565
12.

Arterialization requires the timely suppression of cell growth

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Bioinformatics Unit, CNIC
Accession:
PRJNA666387
ID:
666387
13.

Enhancer-associated H3K4 methylation safeguards in vitro germline competence [scRNA-seq]

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Institute of Biomedicine and Biotechnology of Cantabria (IBBTEC), CSIC/University of Cantabria
Accession:
PRJNA648402
ID:
648402
14.

Enhancer-associated H3K4 methylation safeguards in vitro germline competence [WGBS]

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Epigenomics
Scope:
Multiisolate
Institute of Biomedicine and Biotechnology of Cantabria (IBBTEC), CSIC/University of Cantabria
Accession:
PRJNA648395
ID:
648395
15.

Enhancer-associated H3K4 methylation safeguards in vitro germline competence [RNA-seq]

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Institute of Biomedicine and Biotechnology of Cantabria (IBBTEC), CSIC/University of Cantabria
Accession:
PRJNA648386
ID:
648386
16.

Enhancer-associated H3K4 methylation safeguards in vitro germline competence [ChIP-seq 2]

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Epigenomics
Scope:
Multiisolate
Institute of Biomedicine and Biotechnology of Cantabria (IBBTEC), CSIC/University of Cantabria
Accession:
PRJNA648384
ID:
648384
17.

Enhancer-associated H3K4 methylation safeguards in vitro germline competence [ChIP-seq 1]

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Epigenomics
Scope:
Multiisolate
Institute of Biomedicine and Biotechnology of Cantabria (IBBTEC), CSIC/University of Cantabria
Accession:
PRJNA648371
ID:
648371
18.

Enhancer-associated H3K4 methylation safeguards in vitro germline competence [ATAC-seq]

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Epigenomics
Scope:
Multiisolate
Institute of Biomedicine and Biotechnology of Cantabria (IBBTEC), CSIC/University of Cantabria
Accession:
PRJNA648362
ID:
648362
19.

Enhancer-associated H3K4 methylation safeguards in vitro germline competence [4C-seq]

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Other
Scope:
Multiisolate
Institute of Biomedicine and Biotechnology of Cantabria (IBBTEC), CSIC/University of Cantabria
Accession:
PRJNA648154
ID:
648154
20.

SNP confirmation: Sequencing of PCR amplicons that contained potential biallelic SNPs in HD-B and DM1-A patient cells.

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Other
Scope:
Multiisolate
Center for Integrative Genomics, University of Lausanne
Accession:
PRJNA623396
ID:
623396

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